FFCP PHASE1:Hg19::chr3:184097475..184097505,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=8646 | |EntrezGene=entrezgene:8646 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=1949 | |HGNC=HGNC:1949 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9H2X0 | |UniProt=uniprot:Q9H2X0 | ||
|association_with_transcript=-355bp_to_ENST00000204604,ENST00000310236,ENST00000356534,ENST00000420973,ENST00000448472,ENST00000460627,NM_003741,uc003fov.2,uc003fow.2,uc003fox.2,uc003foy.2_5end | |association_with_transcript=-355bp_to_ENST00000204604,ENST00000310236,ENST00000356534,ENST00000420973,ENST00000448472,ENST00000460627,NM_003741,uc003fov.2,uc003fow.2,uc003fox.2,uc003foy.2_5end | ||
|cluster_id=chr3:184097475..184097505,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_6_at_CHRD_5end | |description=CAGE_peak_6_at_CHRD_5end | ||
Revision as of 18:55, 29 July 2015
| Short description: | p6@CHRD |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_CHRD_5end |
| Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
| Association with transcript: | -355bp_to_ENST00000204604, ENST00000310236, ENST00000356534, ENST00000420973, ENST00000448472, ENST00000460627, NM_003741, uc003fov.2, uc003fow.2, uc003fox.2, uc003foy.2_5end |
| EntrezGene: | 8646 |
| HGNC: | 1949 |
| UniProt: | Q9H2X0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@CHRD |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| preadipocyte of the breast | 1.70e-10 | 3 |
| synovial cell | 1.97e-10 | 3 |
| preadipocyte | 1.28e-09 | 12 |
| perirenal preadipocyte | 1.59e-08 | 1 |
| GAG secreting cell | 1.42e-07 | 9 |
| carbohydrate secreting cell | 1.42e-07 | 9 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| cerebellum | 6.09e-12 | 6 |
| rhombic lip | 6.09e-12 | 6 |
| stratified squamous epithelium | 1.97e-10 | 3 |
| layer of synovial tissue | 1.97e-10 | 3 |
| synovial joint | 1.97e-10 | 3 |
| synovial membrane of synovial joint | 1.97e-10 | 3 |
| tricuspid valve | 8.78e-09 | 1 |
| right atrium valve | 8.78e-09 | 1 |
| outflow tract of atrium | 8.78e-09 | 1 |
| outflow part of right atrium | 8.78e-09 | 1 |
Showing 1 to 10 of 23 entries
| Ontology term | p-value | n |
|---|---|---|
| paranasal sinus cancer | 1.27e-08 | 1 |
| maxillary sinus cancer | 1.27e-08 | 1 |
Showing 1 to 2 of 2 entries
