FFCP PHASE2:Hg19::chr12:2162419..2162431,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:775 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1390 |TSSclassi...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1390 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q13936,E9PDJ1,E9PDJ0 | ||
|association_with_transcript=3bp_to_NM_000719,NM_001129827,NM_001129829,NM_001129830,NM_001129831,NM_001129832,NM_001129833,NM_001129834,NM_001129835,NM_001129836,NM_001129837,NM_001129838,NM_001129839,NM_001129840,NM_001129841,NM_001129842,NM_001129843,NM_001129844,NM_001129846,NM_001167623,NM_001167624,NM_001167625,NM_199460,uc001qjz.2,uc001qkb.2,uc001qkc.2,uc001qkd.2,uc001qke.2,uc001qkf.2,uc001qkg.2,uc001qkh.2,uc001qkl.2,uc001qkn.2,uc001qko.2,uc001qkp.2,uc001qkq.2,uc001qkr.2,uc001qks.2,uc001qkt.2,uc001qku.2,uc009zdu.1,uc009zdv.1,uc009zdw.1_5end | |association_with_transcript=3bp_to_NM_000719,NM_001129827,NM_001129829,NM_001129830,NM_001129831,NM_001129832,NM_001129833,NM_001129834,NM_001129835,NM_001129836,NM_001129837,NM_001129838,NM_001129839,NM_001129840,NM_001129841,NM_001129842,NM_001129843,NM_001129844,NM_001129846,NM_001167623,NM_001167624,NM_001167625,NM_199460,uc001qjz.2,uc001qkb.2,uc001qkc.2,uc001qkd.2,uc001qke.2,uc001qkf.2,uc001qkg.2,uc001qkh.2,uc001qkl.2,uc001qkn.2,uc001qko.2,uc001qkp.2,uc001qkq.2,uc001qkr.2,uc001qks.2,uc001qkt.2,uc001qku.2,uc009zdu.1,uc009zdv.1,uc009zdw.1_5end | ||
|cluster_id=chr12:2162419..2162431,+ | |cluster_id=chr12:2162419..2162431,+ | ||
Latest revision as of 19:30, 17 September 2015
| Short description: | p5@CACNA1C |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_CACNA1C_5end |
| Coexpression cluster: | C3266_uterus_aorta_smooth_colon_Olfactory_Fibroblast_dura |
| Association with transcript: | 3bp_to_NM_000719, NM_001129827, NM_001129829, NM_001129830, NM_001129831, NM_001129832, NM_001129833, NM_001129834, NM_001129835, NM_001129836, NM_001129837, NM_001129838, NM_001129839, NM_001129840, NM_001129841, NM_001129842, NM_001129843, NM_001129844, NM_001129846, NM_001167623, NM_001167624, NM_001167625, NM_199460, uc001qjz.2, uc001qkb.2, uc001qkc.2, uc001qkd.2, uc001qke.2, uc001qkf.2, uc001qkg.2, uc001qkh.2, uc001qkl.2, uc001qkn.2, uc001qko.2, uc001qkp.2, uc001qkq.2, uc001qkr.2, uc001qks.2, uc001qkt.2, uc001qku.2, uc009zdu.1, uc009zdv.1, uc009zdw.1_5end |
| EntrezGene: | CACNA1C |
| HGNC: | 1390 |
| UniProt: | Q13936E9PDJ1E9PDJ0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| receptor cell | 3.25e-08 | 6 |
| sensory epithelial cell | 3.25e-08 | 6 |
| olfactory epithelial cell | 3.25e-08 | 6 |
