FFCP PHASE2:Hg19::chr17:72733377..72733403,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:326624 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:30268 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=326624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=30268 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A8MTC6 | ||
|association_with_transcript=6bp_to_,-6bp_to_ENST00000392610,ENST00000481224_5end | |association_with_transcript=6bp_to_,-6bp_to_ENST00000392610,ENST00000481224_5end | ||
|cluster_id=chr17:72733377..72733403,+ | |cluster_id=chr17:72733377..72733403,+ | ||
Latest revision as of 08:47, 17 September 2015
| Short description: | p1@RAB37 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_RAB37_5end |
| Coexpression cluster: | C3675_Mast_Whole_blood_acute_NK_Neutrophils_CD34 |
| Association with transcript: | 6bp_to_, -6bp_to_ENST00000392610, ENST00000481224_5end |
| EntrezGene: | RAB37 |
| HGNC: | 30268 |
| UniProt: | A8MTC6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@RAB37 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 2.02e-60 | 168 |
| hematopoietic cell | 2.88e-59 | 177 |
| hematopoietic oligopotent progenitor cell | 1.46e-56 | 161 |
| hematopoietic multipotent progenitor cell | 1.46e-56 | 161 |
| leukocyte | 9.83e-44 | 136 |
| hematopoietic lineage restricted progenitor cell | 7.54e-38 | 120 |
| myeloid cell | 3.45e-35 | 108 |
| common myeloid progenitor | 3.45e-35 | 108 |
| nongranular leukocyte | 4.43e-35 | 115 |
| myeloid leukocyte | 1.77e-24 | 72 |
Showing 1 to 10 of 39 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 1.24e-28 | 98 |
| blood island | 1.24e-28 | 98 |
| hemolymphoid system | 1.46e-25 | 108 |
| immune system | 7.91e-16 | 93 |
| bone marrow | 3.70e-15 | 76 |
| blood | 6.06e-14 | 15 |
| haemolymphatic fluid | 6.06e-14 | 15 |
| organism substance | 6.06e-14 | 15 |
| bone element | 6.61e-13 | 82 |
| skeletal element | 1.06e-11 | 90 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| leukemia | 2.60e-13 | 39 |
| myeloid leukemia | 5.21e-11 | 31 |
| hematologic cancer | 1.39e-09 | 51 |
| immune system cancer | 1.39e-09 | 51 |
Showing 1 to 4 of 4 entries
