FFCP PHASE1:Hg19::chr3:184097666..184097703,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=8646 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1949 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9H2X0 | ||
|association_with_transcript=-157bp_to_ENST00000204604,ENST00000310236,ENST00000356534,ENST00000420973,ENST00000448472,ENST00000460627,NM_003741,uc003fov.2,uc003fow.2,uc003fox.2,uc003foy.2_5end | |association_with_transcript=-157bp_to_ENST00000204604,ENST00000310236,ENST00000356534,ENST00000420973,ENST00000448472,ENST00000460627,NM_003741,uc003fov.2,uc003fow.2,uc003fox.2,uc003foy.2_5end | ||
|cluster_id=chr3:184097666..184097703,+ | |cluster_id=chr3:184097666..184097703,+ | ||
Latest revision as of 02:30, 17 September 2015
| Short description: | p2@CHRD |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_CHRD_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -157bp_to_ENST00000204604, ENST00000310236, ENST00000356534, ENST00000420973, ENST00000448472, ENST00000460627, NM_003741, uc003fov.2, uc003fow.2, uc003fox.2, uc003foy.2_5end |
| EntrezGene: | CHRD |
| HGNC: | 1949 |
| UniProt: | Q9H2X0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@CHRD |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 8.49e-47 | 114 |
| neural tube | 5.18e-32 | 56 |
| neural rod | 5.18e-32 | 56 |
| future spinal cord | 5.18e-32 | 56 |
| neural keel | 5.18e-32 | 56 |
| central nervous system | 4.07e-30 | 81 |
| regional part of cerebral cortex | 4.53e-29 | 22 |
| regional part of nervous system | 1.37e-28 | 53 |
| regional part of brain | 1.37e-28 | 53 |
| nervous system | 1.84e-28 | 89 |
Showing 1 to 10 of 46 entries
