FFCP PHASE1:Hg19::chr7:5464974..5464999,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=84629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11962 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A8MTZ4 | ||
|association_with_transcript=45bp_to_ENST00000399434,uc003sok.1_5end | |association_with_transcript=45bp_to_ENST00000399434,uc003sok.1_5end | ||
|cluster_id=chr7:5464974..5464999,- | |cluster_id=chr7:5464974..5464999,- | ||
Latest revision as of 00:28, 19 September 2015
| Short description: | p9@TNRC18 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_9_at_TNRC18_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 45bp_to_ENST00000399434, uc003sok.1_5end |
| EntrezGene: | TNRC18 |
| HGNC: | 11962 |
| UniProt: | A8MTZ4 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p9@TNRC18 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 2.38e-16 | 89 |
| regional part of cerebral cortex | 3.15e-16 | 22 |
| neocortex | 4.37e-16 | 20 |
| cerebral cortex | 5.84e-15 | 25 |
| pallium | 5.84e-15 | 25 |
| ectoderm-derived structure | 6.96e-15 | 171 |
| ectoderm | 6.96e-15 | 171 |
| presumptive ectoderm | 6.96e-15 | 171 |
| cerebral hemisphere | 3.71e-14 | 32 |
| central nervous system | 4.62e-14 | 81 |
Showing 1 to 10 of 35 entries
| Ontology term | p-value | n |
|---|---|---|
| neuroectodermal tumor | 5.13e-07 | 10 |
Showing 1 to 1 of 1 entries
