FFCP PHASE2:Hg19::chr9:92112972..92113048,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:10507 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10732 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=10507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10732 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q92854 | ||
|association_with_transcript=0bp_to_ENST00000422704,ENST00000455551_5end | |association_with_transcript=0bp_to_ENST00000422704,ENST00000455551_5end | ||
|cluster_id=chr9:92112972..92113048,- | |cluster_id=chr9:92112972..92113048,- | ||
Latest revision as of 05:31, 18 September 2015
| Short description: | p1@SEMA4D |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SEMA4D_5end |
| Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
| Association with transcript: | 0bp_to_ENST00000422704, ENST00000455551_5end |
| EntrezGene: | SEMA4D |
| HGNC: | 10732 |
| UniProt: | Q92854 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@SEMA4D |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 1.69e-45 | 168 |
| hematopoietic cell | 5.10e-43 | 177 |
| leukocyte | 4.03e-42 | 136 |
| hematopoietic oligopotent progenitor cell | 8.03e-42 | 161 |
| hematopoietic multipotent progenitor cell | 8.03e-42 | 161 |
| nongranular leukocyte | 1.69e-35 | 115 |
| hematopoietic lineage restricted progenitor cell | 1.56e-34 | 120 |
| myeloid cell | 6.57e-22 | 108 |
| common myeloid progenitor | 6.57e-22 | 108 |
| myeloid leukocyte | 7.12e-21 | 72 |
Showing 1 to 10 of 32 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 2.50e-25 | 114 |
| hematopoietic system | 1.26e-20 | 98 |
| blood island | 1.26e-20 | 98 |
| hemolymphoid system | 3.11e-18 | 108 |
| neural tube | 2.98e-13 | 56 |
| neural rod | 2.98e-13 | 56 |
| future spinal cord | 2.98e-13 | 56 |
| neural keel | 2.98e-13 | 56 |
| regional part of nervous system | 2.72e-12 | 53 |
| regional part of brain | 2.72e-12 | 53 |
Showing 1 to 10 of 37 entries
