UBERON:0003082: Difference between revisions
From FANTOM5_SSTAR
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|id=UBERON:0003082
|name=myotome
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|def="A group of tissues formed from somites that develop into the body wall muscle[WP]. Somitic compartment that is ...") |
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:17, 15 June 2012
| Name: | myotome | ||
|---|---|---|---|
| Definition: | "A group of tissues formed from somites that develop into the body wall muscle[WP]. Somitic compartment that is a precursor of muscle. mesoderm that is derived from the somite that is fated to become the musculature[MP]. Portion of the somites giving rise to body wall muscle masses[ZFA]" [MP:0003939, PMID:17313522, Wikipedia:Myotome, ZFIN:curator] | ||
| Xrefs: |
| ||
| Synonyms: |
"myomeres" RELATED [] "myotome region" RELATED [] "myotomes" RELATED [] | ||
| Comments: | The term "myotome" is also used to describe the muscles served by a single nerve root | ||
| Alt_id: | UBERON:XAO_0000315-ZFA_0001056 | ||
| Subset: |
uberon_slim vertebrate_core |
200px-Gray65.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000490(unilaminar epithelium),UBERON:0004120(mesoderm-derived structure),UBERON:0005291(embryonic tissue) |
|---|---|
| develops_from: | UBERON:0002329(somite) |
| part_of: | UBERON:0000926(mesoderm),UBERON:0004290(dermomyotome) |
Children
| develops from: | UBERON:0001134 (skeletal muscle tissue),UBERON:0014892 (skeletal muscle organ) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003082 (myotome), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.24e-58 | FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_5ac7572c11ad44c61528e3c572da8069 | p@chrX:160838683..160838694, + |
| 5.24e-58 | FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_5ac7572c11ad44c61528e3c572da8069 | p@chrX:160838683..160838694, + |
| 5.11e-50 | FFCP PHASE1:Mm9::chrX:65748600..65748616,+#_83276f31878937af0080c58edf614dd1 | p@chrX:65748600..65748616, + |
| 5.11e-50 | FFCP PHASE2:Mm9::chr12:105433069..105433075,-#_83276f31878937af0080c58edf614dd1 | p@chr12:105433069..105433075, - |
| 5.11e-50 | FFCP PHASE1:Mm9::chr12:105433069..105433075,-#_83276f31878937af0080c58edf614dd1 | p@chr12:105433069..105433075, - |
| 5.11e-50 | FFCP PHASE2:Mm9::chrX:65748600..65748616,+#_83276f31878937af0080c58edf614dd1 | p@chrX:65748600..65748616, + |
| 1.47e-48 | FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_76c54a07e70b9bb07f6f91e9a468a57c | p@chrX:160838787..160838800, + |
| 1.47e-48 | FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_76c54a07e70b9bb07f6f91e9a468a57c | p@chrX:160838787..160838800, + |
| 3.13e-47 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_a2b09cb7be43c3153d7d1cec91bf321d | p@chr6:53359400..53359406, + |
| 3.13e-47 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_a2b09cb7be43c3153d7d1cec91bf321d | p@chr6:53359400..53359406, + |
| 8.42e-44 | FFCP PHASE1:Mm9::chr11:81849982..81850000,+#_6f13d30de0b64929e29f0e60df4b9ed5 | p@chr11:81849982..81850000, + |
| 8.42e-44 | FFCP PHASE2:Mm9::chr11:81849982..81850000,+#_6f13d30de0b64929e29f0e60df4b9ed5 | p@chr11:81849982..81850000, + |
| 1.15e-40 | FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_dae9e184c2f3f4a0d93279af2a48a0b1 | p@chr17:14813242..14813246, - |
| 1.15e-40 | FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_dae9e184c2f3f4a0d93279af2a48a0b1 | p@chr17:14813242..14813246, - |
| 3.7e-39 | FFCP PHASE1:Mm9::chr1:127573795..127573810,+#_0e711495a509634abe85b352a79f919d | p4@Gpr39 |
| 3.7e-39 | FFCP PHASE2:Mm9::chr1:127573795..127573810,+#_0e711495a509634abe85b352a79f919d | p4@Gpr39 |
| 3.75e-39 | FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_b3f87f6b6e631bb1f203a86f5ac60ada | p@chrX:160840025..160840037, + |
| 3.75e-39 | FFCP PHASE2:Mm9::chrX:160823859..160823870,+#_b3f87f6b6e631bb1f203a86f5ac60ada | p@chrX:160823859..160823870, + |
| 3.75e-39 | FFCP PHASE1:Mm9::chrX:160823859..160823870,+#_b3f87f6b6e631bb1f203a86f5ac60ada | p@chrX:160823859..160823870, + |
| 3.75e-39 | FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_b3f87f6b6e631bb1f203a86f5ac60ada | p@chrX:160840025..160840037, + |
| 3.75e-39 | FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_b3f87f6b6e631bb1f203a86f5ac60ada | p@chrX:160840048..160840057, + |
| 3.75e-39 | FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_b3f87f6b6e631bb1f203a86f5ac60ada | p@chrX:160840048..160840057, + |
| 4.61e-38 | FFCP PHASE1:Hg19::chr7:102553470..102553487,+#_d46de67acb716ea8a1852a3cbe189d3f | p2@LRRC17 |
| 4.61e-38 | FFCP PHASE2:Hg19::chr7:102553470..102553487,+#_d46de67acb716ea8a1852a3cbe189d3f | p2@LRRC17 |
| 6.16e-37 | FFCP PHASE2:Hg19::chr10:49813077..49813087,-#_b8c7bc4f6decd68ee8a92a1d86cc40ab | p8@ARHGAP22 |
| 6.16e-37 | FFCP PHASE1:Hg19::chr10:49813077..49813087,-#_b8c7bc4f6decd68ee8a92a1d86cc40ab | p8@ARHGAP22 |
| 7.01e-37 | FFCP PHASE2:Hg19::chr9:35685631..35685657,+#_2bf6174c36957193330fd8d695001380 | p@chr9:35685631..35685657, + |
| 7.01e-37 | FFCP PHASE1:Hg19::chr9:35685631..35685657,+#_2bf6174c36957193330fd8d695001380 | p@chr9:35685631..35685657, + |
| 9.63e-36 | FFCP PHASE2:Hg19::chr10:49813051..49813064,-#_a8ef848b6bdefa1115d9315a44989d3e | p4@ARHGAP22 |
| 9.63e-36 | FFCP PHASE1:Hg19::chr10:49813051..49813064,-#_a8ef848b6bdefa1115d9315a44989d3e | p4@ARHGAP22 |
| 3.31e-35 | FFCP PHASE1:Mm9::chr3:79689074..79689090,+#_b9998957088f1195fcda5a6c0f3c64d4 | p11@Fam198b |
| 3.31e-35 | FFCP PHASE2:Mm9::chr3:79689074..79689090,+#_b9998957088f1195fcda5a6c0f3c64d4 | p11@Fam198b |
| 3.69e-35 | FFCP PHASE1:Mm9::chr1:127574253..127574264,+#_1b62081ce288e890329a35962808d490 | p@chr1:127574253..127574264, + |
| 3.69e-35 | FFCP PHASE2:Mm9::chr1:127574253..127574264,+#_1b62081ce288e890329a35962808d490 | p@chr1:127574253..127574264, + |
| 4.0e-35 | FFCP PHASE1:Hg19::chr7:102553430..102553456,+#_61f4665f10b3df9f0dd06ddc6b4a6c0a | p1@LRRC17 |
| 4.0e-35 | FFCP PHASE2:Hg19::chr7:102553430..102553456,+#_61f4665f10b3df9f0dd06ddc6b4a6c0a | p1@LRRC17 |
| 5.09e-35 | FFCP PHASE1:Mm9::chr1:127573733..127573745,+#_c366c7a15a1841dd72aaa1e520bd0f4b | p7@Gpr39 |
| 5.09e-35 | FFCP PHASE2:Mm9::chr1:127573733..127573745,+#_c366c7a15a1841dd72aaa1e520bd0f4b | p7@Gpr39 |
| 5.48e-35 | FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_0324235d0b34af946467945dd709ae16 | p@chr11:102661517..102661541, - |
| 5.48e-35 | FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_0324235d0b34af946467945dd709ae16 | p@chr11:102661517..102661541, - |
| 5.98e-35 | FFCP PHASE2:Mm9::chr1:127573690..127573699,+#_1e02528f31265f61a7262208083abf1d | p11@Gpr39 |
| 5.98e-35 | FFCP PHASE1:Mm9::chr1:127573690..127573699,+#_1e02528f31265f61a7262208083abf1d | p11@Gpr39 |
| 7.03e-35 | FFCP PHASE1:Mm9::chrX:160839768..160839780,+#_1309b4e144c3eaee438e56ce4f88c044 | p@chrX:160839768..160839780, + |
| 7.03e-35 | FFCP PHASE2:Mm9::chrX:160839768..160839780,+#_1309b4e144c3eaee438e56ce4f88c044 | p@chrX:160839768..160839780, + |
| 1.33e-34 | FFCP PHASE1:Mm9::chr1:127573462..127573472,+#_1e5efe0a05dcddc5a37fc93146e5a713 | p8@Gpr39 |
| 1.33e-34 | FFCP PHASE2:Mm9::chr1:127573462..127573472,+#_1e5efe0a05dcddc5a37fc93146e5a713 | p8@Gpr39 |
| 1.83e-34 | FFCP PHASE2:Hg19::chr4:74703497..74703511,+#_a448df1c429e1aa6f038c2222e8cd5b0 | p@chr4:74703497..74703511, + |
| 1.83e-34 | FFCP PHASE1:Hg19::chr4:74703497..74703511,+#_a448df1c429e1aa6f038c2222e8cd5b0 | p@chr4:74703497..74703511, + |
| 5.92e-34 | FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_4c07fd1f53045ae8781a2869ad514d0e | p@chr4:7846444..7846449, - |
| 5.92e-34 | FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_4c07fd1f53045ae8781a2869ad514d0e | p@chr4:7846444..7846449, - |
| 2.08e-33 | FFCP PHASE2:Hg19::chr7:102553382..102553397,+#_2103fb890bd8019005f8024ac6d28ad1 | p3@LRRC17 |
| 2.08e-33 | FFCP PHASE1:Hg19::chr7:102553382..102553397,+#_2103fb890bd8019005f8024ac6d28ad1 | p3@LRRC17 |
| 1.42e-32 | FFCP PHASE1:Hg19::chr4:74702338..74702349,+#_0d22e733b7dfb1032cde250e327b04de | p2@CXCL6 |
| 1.42e-32 | FFCP PHASE2:Hg19::chr4:74702338..74702349,+#_0d22e733b7dfb1032cde250e327b04de | p2@CXCL6 |
| 1.85e-32 | FFCP PHASE1:Hg19::chr9:35689148..35689192,+#_94e92dafb57850f35e67023c0bf4beb6 | p@chr9:35689148..35689192, + |
| 1.85e-32 | FFCP PHASE2:Hg19::chr9:35689148..35689192,+#_94e92dafb57850f35e67023c0bf4beb6 | p@chr9:35689148..35689192, + |
| 2.15e-32 | FFCP PHASE1:Hg19::chr6:148593425..148593498,+#_6f0cabb5a7741cdfcf9ff59a9774f281 | p2@SASH1 |
| 2.15e-32 | FFCP PHASE2:Hg19::chr6:148593425..148593498,+#_6f0cabb5a7741cdfcf9ff59a9774f281 | p2@SASH1 |
| 2.89e-32 | FFCP PHASE2:Hg19::chr4:169059590..169059615,+#_83717d6cc1ba527c7b2e563d9fdedde9 | p@chr4:169059590..169059615, + |
| 2.89e-32 | FFCP PHASE1:Hg19::chr4:169059590..169059615,+#_83717d6cc1ba527c7b2e563d9fdedde9 | p@chr4:169059590..169059615, + |
| 3.77e-32 | FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_fba4dc20f1bc7d43267e3b43dfbe4f29 | p@chr2:134548872..134548879, - |
| 3.77e-32 | FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_fba4dc20f1bc7d43267e3b43dfbe4f29 | p@chr2:134548872..134548879, - |
| 3.94e-32 | FFCP PHASE1:Mm9::chr7:96658543..96658553,-#_d30a7668e210d36e2ef2bf03dbd8f392 | p@chr7:96658543..96658553, - |
| 3.94e-32 | FFCP PHASE2:Mm9::chr7:96658543..96658553,-#_d30a7668e210d36e2ef2bf03dbd8f392 | p@chr7:96658543..96658553, - |
| 4.14e-32 | FFCP PHASE2:Hg19::chr14:94595800..94595811,-#_236842f16af25a40054725ab01830a01 | p3@IFI27L2 |
| 4.14e-32 | FFCP PHASE1:Hg19::chr14:94595800..94595811,-#_236842f16af25a40054725ab01830a01 | p3@IFI27L2 |
| 4.65e-32 | FFCP PHASE2:Hg19::chr9:35684475..35684520,+#_93811635469677730388e03e9537fcf0 | p@chr9:35684475..35684520, + |
| 4.65e-32 | FFCP PHASE1:Hg19::chr9:35684475..35684520,+#_93811635469677730388e03e9537fcf0 | p@chr9:35684475..35684520, + |
| 8.06e-32 | FFCP PHASE2:Hg19::chr7:93516035..93516056,+#_e0133101a2c7bc91c487f490abe7a5a5 | p1@CU675118 |
| 8.06e-32 | FFCP PHASE1:Hg19::chr7:93516035..93516056,+#_e0133101a2c7bc91c487f490abe7a5a5 | p1@CU675118 |
| 1.33e-31 | FFCP PHASE2:Mm9::chr5:30339923..30339935,+#_b3cf9bce2d2235ca5ff8943ea021f585 | p2@Il6 |
| 1.33e-31 | FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_b3cf9bce2d2235ca5ff8943ea021f585 | p@chr7:91081998..91082010, - |
| 1.33e-31 | FFCP PHASE1:Mm9::chr5:30339923..30339935,+#_b3cf9bce2d2235ca5ff8943ea021f585 | p2@Il6 |
| 1.33e-31 | FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_b3cf9bce2d2235ca5ff8943ea021f585 | p@chr7:91081998..91082010, - |
| 1.52e-31 | FFCP PHASE2:Hg19::chr9:35685445..35685517,+#_cf4489f917d25ee42c9e5760a0672d2f | p@chr9:35685445..35685517, + |
| 1.52e-31 | FFCP PHASE1:Hg19::chr9:35685445..35685517,+#_cf4489f917d25ee42c9e5760a0672d2f | p@chr9:35685445..35685517, + |
| 1.59e-31 | FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_24aad1e301da76ca90ad94ecc0548e48 | p@chr10:67598037..67598049, - |
| 1.59e-31 | FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_24aad1e301da76ca90ad94ecc0548e48 | p@chr10:67598037..67598049, - |
| 2.72e-31 | FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_04176113e3ece751382188375a9c2707 | p@chr2:65009852..65009866, - |
| 2.72e-31 | FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_04176113e3ece751382188375a9c2707 | p@chr2:65009852..65009866, - |
| 2.8e-31 | FFCP PHASE1:Mm9::chr18:52678391..52678395,-#_29c2fac7dec525cc7f4e5b5e9c114afe | p@chr18:52678391..52678395, - |
| 2.8e-31 | FFCP PHASE2:Mm9::chr18:52678391..52678395,-#_29c2fac7dec525cc7f4e5b5e9c114afe | p@chr18:52678391..52678395, - |
| 3.27e-31 | FFCP PHASE1:Hg19::chr9:118916063..118916077,+#_3703ae85a6f35a5d580ee5b0407c9d24 | p2@PAPPA |
| 3.27e-31 | FFCP PHASE2:Hg19::chr9:118916063..118916077,+#_3703ae85a6f35a5d580ee5b0407c9d24 | p2@PAPPA |
| 4.08e-31 | FFCP PHASE2:Hg19::chr4:74702666..74702694,+#_c2fb5e73d3b72f4c068f41e7c2f04494 | p3@CXCL6 |
| 4.08e-31 | FFCP PHASE1:Hg19::chr4:74702666..74702694,+#_c2fb5e73d3b72f4c068f41e7c2f04494 | p3@CXCL6 |
| 6.01e-31 | FFCP PHASE2:Hg19::chr19:50031567..50031632,+#_2d0c04978c1b222151ac8b4d36de9b25 | p2@RCN3 |
| 6.01e-31 | FFCP PHASE1:Hg19::chr19:50031567..50031632,+#_2d0c04978c1b222151ac8b4d36de9b25 | p2@RCN3 |
| 7.63e-31 | FFCP PHASE1:Hg19::chr1:79472477..79472510,-#_5054f358c7661f55ff1cd8cb1b039e0b | p2@ELTD1 |
| 7.63e-31 | FFCP PHASE2:Hg19::chr1:79472477..79472510,-#_5054f358c7661f55ff1cd8cb1b039e0b | p2@ELTD1 |
| 7.65e-31 | FFCP PHASE2:Mm9::chr6:91222095..91222107,+#_30af228404904f821ea12e21e8e6d48f | p@chr6:91222095..91222107, + |
| 7.65e-31 | FFCP PHASE1:Mm9::chr6:91222095..91222107,+#_30af228404904f821ea12e21e8e6d48f | p@chr6:91222095..91222107, + |
| 1.01e-30 | FFCP PHASE2:Mm9::chr5:114822634..114822665,-#_d1ceb95cff5757fcdf7b18707c07374b | p9@Kctd10 |
| 1.01e-30 | FFCP PHASE1:Mm9::chr5:114822634..114822665,-#_d1ceb95cff5757fcdf7b18707c07374b | p9@Kctd10 |
| 1.17e-30 | FFCP PHASE2:Mm9::chr1:127573773..127573786,+#_de4b1d0d56b6d235daf3945b815297e3 | p6@Gpr39 |
| 1.17e-30 | FFCP PHASE1:Mm9::chr1:127573773..127573786,+#_de4b1d0d56b6d235daf3945b815297e3 | p6@Gpr39 |
| 1.35e-30 | FFCP PHASE1:Hg19::chr4:74703963..74703975,+#_f9ebd1d108bf7585e4544a645083ac13 | p@chr4:74703963..74703975, + |
| 1.35e-30 | FFCP PHASE2:Hg19::chr4:74703963..74703975,+#_f9ebd1d108bf7585e4544a645083ac13 | p@chr4:74703963..74703975, + |
| 4.78e-30 | FFCP PHASE2:Hg19::chr14:96722539..96722555,+#_2c2bb2b4419217d7acdc102e6ff74137 | p1@BDKRB1 |
| 4.78e-30 | FFCP PHASE1:Hg19::chr14:96722539..96722555,+#_2c2bb2b4419217d7acdc102e6ff74137 | p1@BDKRB1 |
