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FFCP PHASE1:Mm9::chr4:106926046..106926096,-: Difference between revisions

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|description=CAGE_peak_1_at_Lrrc42_5end
|description=CAGE_peak_1_at_Lrrc42_5end
|id=chr4:106926046..106926096,-
|id=chr4:106926046..106926096,-
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=19.6983081938897,16.40184415905,27.7549536027617,6.95667686005709,11.520601788766,17.2915650069246,9.57811826441655,12.7832090207161,20.27357598984,25.2789688427753,17.977886663678,23.7721033806103,11.8128503652532,15.9105132402575,5.3297561890506,4.85940641735582,4.89693314689703,6.78243655520211,5.75880621144103,11.8829102503448,13.0116233931137,6.7517846816602,3.13439746966722,3.83981814704176,10.3234176480227,25.8404383851759,22.3996238002719,16.8067561494993,17.29213117053,17.3900789534352,14.8559442139054,10.1604907753541,13.5314253268605,15.8481681015439,12.1317680295535,16.2909952451323,14.0876855821035,2.09265815368454,2.3440060335714,4.18818995179039,1.76469446409304,0.683045484958446,0.485510353031154,13.7227531593379,11.2528393653661,10.0950713688925,15.6478268869608,27.2531445475558,27.460772841809,29.5533446592911,24.3576373628131,25.8754615856949,6.54352163625172,8.70434570413613,9.41062637598899,16.9791227783725,16.0458726365704,13.4074743992135,15.9830004079082,10.5798195854407,15.8457850876545,21.6860500524245,18.6751907183339,12.1486461832989,7.9109309005358,8.5257613793532,18.2756067416227,15.7529505181837,16.5903379693564,18.765825428105,17.0363218694619,16.5677570954206,19.8781686856452,14.9438775042244,20.5109307979026,14.7075005857603,13.2139057199266,7.2781782708557,6.45147439676223,15.9582408153535,18.6634792948916,16.1483144872596,6.97957497503452,7.31591393041184,7.63991238884051,15.0260578591571,13.5253096759148,15.4711540034999,5.45228591998925,4.60986516651392,12.1743085254705,12.9063581547208,10.879541339324,8.09554787456726,12.3457519315057,9.85659151614138,8.84799846830037,16.1908806449155,25.718814455684,16.2536204274756,14.6477156567748,8.98285341900225,22.9324715735981,14.2213340630666,10.1750789275271,7.34743609877786,10.6160133453104,7.19358442230078,3.88406825470758,5.78924342352817,17.6955033301459,14.6143429589828,8.53277339847416,13.565037649736,9.40709657085639,7.1629957057915,9.88779870937496,4.77177877835708,3.5384422077995,10.0295446967394,4.41683036920787,6.78825354389311,13.0474232852686,8.19786231632332,8.3778682725382,7.15279754584056,6.70964697233154,5.39912457894067,4.3203877204842,6.29120685500255,6.8625090422794,16.3350657746724,9.56033761057521,10.9957646652042,6.02585329222724,10.3834408363365,14.0538322113436,6.22034853050465,3.79084137650512,5.26104639716185,17.3060189140396,25.9789378009824,22.3277040958633,20.646560043493,19.5264752564311,17.8078071195941,20.3332742294612,11.3829483125167,16.383167462896,15.3175924935934,19.0027214097065,17.535658594206,17.7950239504383,13.5818344943645,18.7261744131229,18.7092210809384,8.42655824775882,4.11756651383544,4.83077948972507,15.3273071676271,15.0096678387902,19.4467026377896,11.3637473080901,12.199382368339,15.4267112887378,12.556833016522,12.3405764643825,9.10769670463922,10.0381508447223,6.40253109908471,4.45878452502207,6.14039947186396,3.95190207523891,6.1734952629771,9.2527577368216,10.8049842998249,4.29544417878937,5.55346189993443,17.4896365438892,18.1144604051142,11.5980715189884,10.8909103296605,10.0070119730192,8.75037880117772,7.11793592316767,12.6818195137488,10.8074139784116,10.7436494902221,8.38345574612217,8.98819408654222,11.0230405436094,9.55878111620963,16.1217715810119,17.3657739166788,4.50830942692322,12.4227309985642,14.5464365375719,10.2398297039865,13.0899631847213,6.6424566590821,6.75094529717912,12.0929220643365,13.933273473096,8.17541018008861,7.27268281918851,7.42044970870017,5.88294352026658,10.8529721888588,12.9859184408524,8.0554918486227,7.94462611197673,13.7280706594041,23.0029130443767,13.7692150637346,15.601883655728,8.84026072814891,8.25228102200796,14.473305640901,7.39012760666419,22.1704951771467,13.3631280682461,12.0519010900384,13.1426539041561,10.887906733718,11.6641384034147,12.8788207586147,9.77337893458384,11.9590932410338,10.0456504254217,12.4536119183961,7.59813920209941,6.79850575333104,7.53956419696361,7.61467957346193,4.42587845717133,6.62248191131358,6.26147300952389,9.84578167374507,24.0984369703713,5.04941854408746,11.042787679569,11.7131623288992,11.2020166821055,8.12493913038677,9.13474563737816,9.90767857760913,14.1683745586213,11.1057226006299,8.30104333687699,8.67567554338879,9.36804562374573,24.0388564950795,19.0577742443684,9.23832688646199,2.65490276679926,14.0812768969889,14.2092071773433,12.2593301841334,12.4026795009925,10.1453598821496,10.0787034335606,9.81541069589265,10.3384239731569,9.7971394960103,10.5418608574999,3.09406629744561,7.83011093233712,21.4272701897259,23.9313564998096,25.5061071687595,15.7832807941623,21.9393645650547,21.3913726782757,18.5723618959906,4.92810586933792,9.74427525973573,6.17479514553893,10.7176064411962,10.6566521619298,9.46912921372047,16.1152664404234,8.20704498725306,6.12109756922687,6.11903496634682,4.10090113914846,17.3364969089107,7.59297562215818,6.59289599516419,5.05768642567793,7.54967971581525,4.41943917984024,4.47844647435706,5.38979897837253,9.54670618015114,16.6076396630096,14.4356821660063,15.6607744191612,17.1452402731864,13.3201163885168,10.7891477107857,11.323523434371,12.8260411572175,48.2167700645469,1.86401793926078,29.8757257502621,21.5303826303329,27.6315679063353,30.9177389467036,35.1314719859429,21.7953401883104,19.2465871379036,25.9106725839461,42.5728938368386,33.3386086739888,22.7543704943714,21.4887562027161,20.6779719595967,20.1313476043061,20.1377275615582,25.0637373934474,22.2523117355017,30.6498396275921,22.1534290761866,28.9773711351184,25.2244530028049,28.5338103937259,29.139906341186,27.3241630258536,27.4660720126687,4.53460767230423,13.3191572024439,10.7656627931371,7.72269235274761,5.60249822693352,11.4486310025221,6.95976172215607,9.21784030039983,6.52043735245972,10.1655331671072,8.28585425712918,12.0308057822273,10.4830441229649,14.3867329151835,7.55393897389701,6.75022500231806,6.75481804836331,6.79713613476307,8.28416498802912,24.1824519871132,10.3746467084268,14.1708892775931,13.1277627216879,12.367176595051,17.6489768112014,7.11189528965169,10.0957178047058,10.5903339165299,8.59170519996911,8.11133759648767,7.9223063382152,11.2369808963859,11.7166028900911,10.7404326946997,10.0021675169445,10.7772423128716,11.3816440073586,5.76920261124629,7.80154276712306,13.3719008430312,11.5359274003569,13.8292990169446,10.7556348307923,10.540250606517,12.9460350074265,7.86590283352922,5.5244639401947,11.0001332215148,11.2228454331548,11.0330566855482,12.411564779321,6.95692773388472,13.0146946596211,12.9247429357365,14.9886346762768,13.1001700729429,9.88406848622172,10.1382815996487,11.4707537942148,4.86922454802885
|phase1_expression=19.6983081938897,16.40184415905,27.7549536027617,6.95667686005709,11.520601788766,17.2915650069246,9.57811826441655,12.7832090207161,20.27357598984,25.2789688427753,17.977886663678,23.7721033806103,11.8128503652532,15.9105132402575,5.3297561890506,4.85940641735582,4.89693314689703,6.78243655520211,5.75880621144103,11.8829102503448,13.0116233931137,6.7517846816602,3.13439746966722,3.83981814704176,10.3234176480227,25.8404383851759,22.3996238002719,16.8067561494993,17.29213117053,17.3900789534352,14.8559442139054,10.1604907753541,13.5314253268605,15.8481681015439,12.1317680295535,16.2909952451323,14.0876855821035,2.09265815368454,2.3440060335714,4.18818995179039,1.76469446409304,0.683045484958446,0.485510353031154,13.7227531593379,11.2528393653661,10.0950713688925,15.6478268869608,27.2531445475558,27.460772841809,29.5533446592911,24.3576373628131,25.8754615856949,6.54352163625172,8.70434570413613,9.41062637598899,16.9791227783725,16.0458726365704,13.4074743992135,15.9830004079082,10.5798195854407,15.8457850876545,21.6860500524245,18.6751907183339,12.1486461832989,7.9109309005358,8.5257613793532,18.2756067416227,15.7529505181837,16.5903379693564,18.765825428105,17.0363218694619,16.5677570954206,19.8781686856452,14.9438775042244,20.5109307979026,14.7075005857603,13.2139057199266,7.2781782708557,6.45147439676223,15.9582408153535,18.6634792948916,16.1483144872596,6.97957497503452,7.31591393041184,7.63991238884051,15.0260578591571,13.5253096759148,15.4711540034999,5.45228591998925,4.60986516651392,12.1743085254705,12.9063581547208,10.879541339324,8.09554787456726,12.3457519315057,9.85659151614138,8.84799846830037,16.1908806449155,25.718814455684,16.2536204274756,14.6477156567748,8.98285341900225,22.9324715735981,14.2213340630666,10.1750789275271,7.34743609877786,10.6160133453104,7.19358442230078,3.88406825470758,5.78924342352817,17.6955033301459,14.6143429589828,8.53277339847416,13.565037649736,9.40709657085639,7.1629957057915,9.88779870937496,4.77177877835708,3.5384422077995,10.0295446967394,4.41683036920787,6.78825354389311,13.0474232852686,8.19786231632332,8.3778682725382,7.15279754584056,6.70964697233154,5.39912457894067,4.3203877204842,6.29120685500255,6.8625090422794,16.3350657746724,9.56033761057521,10.9957646652042,6.02585329222724,10.3834408363365,14.0538322113436,6.22034853050465,3.79084137650512,5.26104639716185,17.3060189140396,25.9789378009824,22.3277040958633,20.646560043493,19.5264752564311,17.8078071195941,20.3332742294612,11.3829483125167,16.383167462896,15.3175924935934,19.0027214097065,17.535658594206,17.7950239504383,13.5818344943645,18.7261744131229,18.7092210809384,8.42655824775882,4.11756651383544,4.83077948972507,15.3273071676271,15.0096678387902,19.4467026377896,11.3637473080901,12.199382368339,15.4267112887378,12.556833016522,12.3405764643825,9.10769670463922,10.0381508447223,6.40253109908471,4.45878452502207,6.14039947186396,3.95190207523891,6.1734952629771,9.2527577368216,10.8049842998249,4.29544417878937,5.55346189993443,17.4896365438892,18.1144604051142,11.5980715189884,10.8909103296605,10.0070119730192,8.75037880117772,7.11793592316767,12.6818195137488,10.8074139784116,10.7436494902221,8.38345574612217,8.98819408654222,11.0230405436094,9.55878111620963,16.1217715810119,17.3657739166788,4.50830942692322,12.4227309985642,14.5464365375719,10.2398297039865,13.0899631847213,6.6424566590821,6.75094529717912,12.0929220643365,13.933273473096,8.17541018008861,7.27268281918851,7.42044970870017,5.88294352026658,10.8529721888588,12.9859184408524,8.0554918486227,7.94462611197673,13.7280706594041,23.0029130443767,13.7692150637346,15.601883655728,8.84026072814891,8.25228102200796,14.473305640901,7.39012760666419,22.1704951771467,13.3631280682461,12.0519010900384,13.1426539041561,10.887906733718,11.6641384034147,12.8788207586147,9.77337893458384,11.9590932410338,10.0456504254217,12.4536119183961,7.59813920209941,6.79850575333104,7.53956419696361,7.61467957346193,4.42587845717133,6.62248191131358,6.26147300952389,9.84578167374507,24.0984369703713,5.04941854408746,11.042787679569,11.7131623288992,11.2020166821055,8.12493913038677,9.13474563737816,9.90767857760913,14.1683745586213,11.1057226006299,8.30104333687699,8.67567554338879,9.36804562374573,24.0388564950795,19.0577742443684,9.23832688646199,2.65490276679926,14.0812768969889,14.2092071773433,12.2593301841334,12.4026795009925,10.1453598821496,10.0787034335606,9.81541069589265,10.3384239731569,9.7971394960103,10.5418608574999,3.09406629744561,7.83011093233712,21.4272701897259,23.9313564998096,25.5061071687595,15.7832807941623,21.9393645650547,21.3913726782757,18.5723618959906,4.92810586933792,9.74427525973573,6.17479514553893,10.7176064411962,10.6566521619298,9.46912921372047,16.1152664404234,8.20704498725306,6.12109756922687,6.11903496634682,4.10090113914846,17.3364969089107,7.59297562215818,6.59289599516419,5.05768642567793,7.54967971581525,4.41943917984024,4.47844647435706,5.38979897837253,9.54670618015114,16.6076396630096,14.4356821660063,15.6607744191612,17.1452402731864,13.3201163885168,10.7891477107857,11.323523434371,12.8260411572175,48.2167700645469,1.86401793926078,29.8757257502621,21.5303826303329,27.6315679063353,30.9177389467036,35.1314719859429,21.7953401883104,19.2465871379036,25.9106725839461,42.5728938368386,33.3386086739888,22.7543704943714,21.4887562027161,20.6779719595967,20.1313476043061,20.1377275615582,25.0637373934474,22.2523117355017,30.6498396275921,22.1534290761866,28.9773711351184,25.2244530028049,28.5338103937259,29.139906341186,27.3241630258536,27.4660720126687,4.53460767230423,13.3191572024439,10.7656627931371,7.72269235274761,5.60249822693352,11.4486310025221,6.95976172215607,9.21784030039983,6.52043735245972,10.1655331671072,8.28585425712918,12.0308057822273,10.4830441229649,14.3867329151835,7.55393897389701,6.75022500231806,6.75481804836331,6.79713613476307,8.28416498802912,24.1824519871132,10.3746467084268,14.1708892775931,13.1277627216879,12.367176595051,17.6489768112014,7.11189528965169,10.0957178047058,10.5903339165299,8.59170519996911,8.11133759648767,7.9223063382152,11.2369808963859,11.7166028900911,10.7404326946997,10.0021675169445,10.7772423128716,11.3816440073586,5.76920261124629,7.80154276712306,13.3719008430312,11.5359274003569,13.8292990169446,10.7556348307923,10.540250606517,12.9460350074265,7.86590283352922,5.5244639401947,11.0001332215148,11.2228454331548,11.0330566855482,12.411564779321,6.95692773388472,13.0146946596211,12.9247429357365,14.9886346762768,13.1001700729429,9.88406848622172,10.1382815996487,11.4707537942148,4.86922454802885
|short_description=p1@Lrrc42
|short_description=p1@Lrrc42
}}
}}

Revision as of 20:02, 18 April 2012

Short description:p1@Lrrc42
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrrc42_5end
Coexpression cluster:NA
Association with transcript: 40bp_to_ENSMUST00000030360_5end
EntrezGene:Lrrc42
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Lrrc42

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G719.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I627.75
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I717.29
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.58
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E720.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F225.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E617.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F123.77
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.81
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E815.91
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.86
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.78
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.76
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.75
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.32
GP2+ M cell, pool1.CNhs13228.11845-124H925.84
GP2+ M cell, pool2.CNhs13231.11846-124I122.40
GP2+ M cell, pool3.CNhs13240.11847-124I216.81
Ileum epithelium, pool1.CNhs13199.10252-104B917.29
Ileum epithelium, pool2.CNhs13232.10253-104C117.39
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G613.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.13
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.29
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.72
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.25
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C227.25
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B827.46
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C329.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C424.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C425.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.54
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E116.05
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C315.98
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C715.85
Mouse Meningeal cells, donor1.CNhs12132.11716-123C621.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D118.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C712.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C818.28
Mouse Microglia, donor2.CNhs12634.11736-123E815.75
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.77
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D519.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D214.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.51
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.64
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D615.03
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.47
Mouse Schwann, donor1.CNhs12507.11728-123D95.45
Mouse Schwann, donor2.CNhs12573.11746-123F94.61
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.17
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F412.35
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E325.72
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I816.25
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.18
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.62
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.19
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D75.79
adrenal gland, embryo E14.CNhs11038.406-44C517.70
adrenal gland, embryo E16.CNhs11004.1254-43D614.61
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F513.57
adrenal gland, neonate N00.CNhs11191.1311-23C19.41
adrenal gland, neonate N25.CNhs11223.1377-27I37.16
amnion, adult pregnant day17.5.CNhs10488.583-22A89.89
aorta, adult.CNhs10498.46-23H14.77
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F510.03
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B28.20
cerebellum, neonate N30.CNhs11135.1395-42I28.38
colon, adult.CNhs10468.36-18H77.15
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.32
corpora quadrigemina, adult.CNhs10501.16-22A46.29
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F116.34
cortex, adult.CNhs10473.12-14D59.56
cortex, neonate N30.CNhs11107.1392-42F211.00
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B210.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.05
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.22
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G45.26
eyeball, embryo E12.CNhs11016.345-16C617.31
eyeball, embryo E14.CNhs10521.399-16E225.98
eyeball, embryo E15.CNhs10593.426-16C922.33
eyeball, embryo E17.CNhs11023.1261-18D420.65
eyeball, neonate N00.CNhs11207.633-15C619.53
eyeball, neonate N01.CNhs11140.1532-43E717.81
eyeball, neonate N02.CNhs11205.1551-44G820.33
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E216.38
forelimb, embryo E12.CNhs10600.359-14H215.32
forelimb, embryo E13.CNhs10589.384-1E219.00
forelimb, embryo E14.CNhs10577.413-26A817.54
forelimb, embryo E15.CNhs11007.437-20E717.80
forelimb, embryo E17.CNhs10598.1517-43C413.58
forelimb, embryo E18.CNhs11008.1520-43B518.73
gonad, embryo E13.CNhs11044.1564-45I618.71
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E915.33
heart, embryo E12.CNhs11015.353-12F515.01
heart, embryo E13.CNhs11013.376-3I919.45
heart, embryo E14.CNhs10597.403-26D411.36
heart, embryo E15.CNhs11017.431-16C812.20
heart, embryo E16.CNhs11021.457-17C615.43
heart, embryo E17.CNhs11025.479-18E512.56
heart, embryo E18.CNhs11030.1283-20G312.34
heart, neonate N00.CNhs11213.639-21E39.11
heart, neonate N03.CNhs11221.1349-25I210.04
heart, neonate N10.CNhs11118.749-24G16.40
heart, neonate N16.CNhs11209.782-15G14.46
heart, neonate N20.CNhs11127.821-26I66.14
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D26.17
hippocampus, adult.CNhs10478.13-16E89.25
hippocampus, neonate N00.CNhs11228.627-43G110.80
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A35.55
intestine, embryo E12.CNhs11019.1251-16I517.49
intestine, embryo E13.CNhs11010.381-16D518.11
intestine, embryo E15.CNhs10602.976-16D811.60
intestine, embryo E16.CNhs10585.463-22H410.89
intestine, embryo E17.CNhs10582.482-18D310.01
intestine, embryo E18.CNhs10526.1289-20F78.75
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E912.68
intestine, neonate N06.CNhs11102.688-20B810.81
intestine, neonate N07.CNhs11095.720-20F210.74
intestine, neonate N10.CNhs11098.755-23A58.38
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E311.02
intestine, neonate N30.CNhs11131.1384-42G19.56
kidney, embryo E14.CNhs10606.411-4I916.12
kidney, embryo E15.CNhs10997.434-16F817.37
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I212.42
kidney, embryo E18.CNhs11001.1288-20C714.55
kidney, neonate N00.CNhs11214.646-21G710.24
kidney, neonate N10.CNhs11206.758-6D513.09
kidney, neonate N20.CNhs11113.832-19I16.64
kidney, neonate N25.CNhs11122.1353-25F36.75
kidney, neonate N30.CNhs11203.1385-42H112.09
liver, adult pregnant day01.CNhs10466.508-5B213.93
liver, embryo E12.CNhs10601.355-15F88.18
liver, embryo E13.CNhs10524.378-3H67.27
liver, embryo E14.CNhs10594.409-16E17.42
liver, embryo E15.CNhs10520.433-16D75.88
liver, embryo E16.CNhs10523.462-17F510.85
liver, embryo E17.CNhs10510.481-18A312.99
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F47.94
liver, neonate N03.CNhs11123.1345-25G213.73
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H213.77
liver, neonate N10.CNhs11115.751-24B915.60
liver, neonate N20.CNhs11220.823-25A38.84
liver, neonate N25.CNhs11198.1368-26H18.25
liver, neonate N30.CNhs11106.1382-42D114.47
lung, adult.CNhs10474.28-22B17.39
lung, embryo E12.CNhs10522.354-16G222.17
lung, embryo E14.CNhs10604.404-26F813.36
lung, embryo E15.CNhs11020.432-17C512.05
lung, embryo E16.CNhs10998.458-17B613.14
lung, embryo E17.CNhs10605.480-44A610.89
lung, embryo E18.CNhs10583.1287-20I611.66
lung, neonate N00.CNhs11224.640-42C612.88
lung, neonate N06.CNhs11212.683-20E59.77
lung, neonate N07.CNhs11111.715-19A311.96
lung, neonate N10.CNhs11219.750-23E610.05
lung, neonate N20.CNhs11109.822-18A412.45
lung, neonate N25.CNhs11119.1359-25C77.60
lung, neonate N30.CNhs11133.1394-42H26.80
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C26.26
medulla oblongata, neonate N30.CNhs11200.1396-42A39.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C724.10
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.71
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.20
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.91
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.17
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.11
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.30
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I79.37
ovary, embryo E18.CNhs11040.505-44H724.04
ovary, neonate N00.CNhs11217.1299-22I419.06
oviduct, adult pregnant day01.CNhs10500.988-6G69.24
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F414.08
pancreas, embryo E15.CNhs11042.1556-45F214.21
pancreas, embryo E16.CNhs11003.460-26E512.26
pancreas, embryo E17.CNhs10599.1558-45G312.40
pancreas, embryo E18.CNhs10580.1535-43I710.15
pancreas, neonate N00.CNhs11105.645-26G910.08
pancreas, neonate N01.CNhs11138.1531-43D79.82
pancreas, neonate N02.CNhs11139.1539-43D810.34
pancreas, neonate N16.CNhs11136.787-43B69.80
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E621.43
pituitary gland, embryo E13.CNhs11009.370-44C723.93
pituitary gland, embryo E14.CNhs11037.398-44A525.51
pituitary gland, embryo E15.CNhs10592.427-16B915.78
pituitary gland, embryo E16.CNhs11036.449-43F621.94
pituitary gland, embryo E17.CNhs11039.1265-44F521.39
pituitary gland, neonate N00.CNhs11190.1308-22E918.57
placenta, adult pregnant day10.CNhs10472.539-13I74.93
placenta, adult pregnant day17.CNhs10464.577-18G39.74
prostate, adult.CNhs10470.859-1F86.17
skin, adult.CNhs10492.30-1C310.72
skin, neonate N00.CNhs11124.650-25G410.66
skin, neonate N03.CNhs11215.662-22H39.47
skin, neonate N06.CNhs11097.693-20I516.12
skin, neonate N10.CNhs11108.762-6C48.21
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C96.12
spleen, adult.CNhs10465.25-2G24.10
spleen, embryo E16.CNhs11035.461-43C117.34
spleen, embryo E18.CNhs11011.1271-21F27.59
spleen, neonate N10.CNhs11116.752-24D16.59
spleen, neonate N20.CNhs11112.824-19H15.06
spleen, neonate N25.CNhs11099.1354-25G37.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.39
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E316.61
stomach, embryo E15.CNhs10603.1252-16G814.44
stomach, embryo E16.CNhs11022.459-17D415.66
stomach, embryo E17.CNhs11006.1035-18D517.15
stomach, embryo E18.CNhs10999.1286-20C613.32
stomach, neonate N03.CNhs11193.1340-24B810.79
stomach, neonate N07.CNhs11210.718-18A911.32
stomach, neonate N25.CNhs11104.1355-25E412.83
stomach, neonate N30.CNhs11134.1386-42I148.22
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G529.88
testis, embryo E13.CNhs11031.389-23F521.53
testis, embryo E15.CNhs11034.443-27C527.63
testis, embryo E16.CNhs11033.470-26G530.92
testis, embryo E17.CNhs11029.486-18I535.13
testis, embryo E18.CNhs11027.503-18G521.80
testis, neonate N00.CNhs11189.1300-22B719.25
testis, neonate N07.CNhs11222.726-26I425.91
testis, neonate N10.CNhs11204.763-44D942.57
testis, neonate N20.CNhs11110.839-18H333.34
testis, neonate N30.CNhs11130.1391-42E222.75
thymus, adult.CNhs10471.38-12B521.49
thymus, embryo E14.CNhs11041.402-44I420.68
thymus, embryo E15.CNhs11005.430-45I220.13
thymus, embryo E16.CNhs11002.456-26C520.14
thymus, embryo E17.CNhs10581.478-18C125.06
thymus, embryo E18.CNhs10595.1273-19G422.25
thymus, neonate N02.CNhs11181.1541-43F830.65
thymus, neonate N03.CNhs11137.2104-43C722.15
thymus, neonate N06.CNhs11197.681-26C428.98
thymus, neonate N07.CNhs11211.713-19D325.22
thymus, neonate N10.CNhs11194.748-24E428.53
thymus, neonate N20.CNhs11186.820-7A229.14
thymus, neonate N25.CNhs11125.1362-25G727.32
thymus, neonate N30.CNhs11132.1393-42G227.47
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.32
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.77
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.72
urinary bladder, adult.CNhs10481.879-12E45.60
uterus, adult pregnant day19.CNhs10497.590-15F511.45
uterus, adult.CNhs10509.92-27E56.96
vagina, adult.CNhs10502.89-27D59.22
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I824.18
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H214.17
whole body, embryo E14.5.CNhs10578.420-27D213.13
whole body, embryo E14.CNhs10519.395-14B112.37
whole body, embryo E16.CNhs10514.453-14F217.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.59
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.72
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.74
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.83
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.41
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.01
whole body, embryo E17.5.CNhs10513.490-9F912.92
whole body, embryo E17.CNhs10517.475-3I514.99
whole body, embryo E18.CNhs10516.493-3B313.10
whole body, neonate N00.CNhs10525.657-19C29.88
whole body, neonate N01.CNhs10576.659-23C610.14
whole body, neonate N06.CNhs10515.692-21D111.47
whole body, neonate N10.CNhs10518.761-6B44.87





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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