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Revision as of 17:40, 15 June 2012

Name:endothelial cell of sinusoid
Namespace:cell
Definition:"An endothelial cell that lines any of the venous cavities through which blood passes in various glands and organs such as the spleen and liver." [GOC:tfm, ISBN:0618947256]
Xrefs:
links:
FMA:63134
Alt_id: CL:1000403
Created by:tmeehan
Creation date:2010-09-14T10:57:26Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000115(endothelial cell)
part_of:UBERON:0003909(sinusoid)



Children


is a:CL:1000398 (endothelial cell of hepatic sinusoid)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002262 (endothelial cell of sinusoid), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
8.99e-131FFCP PHASE1:Hg19::chr7:158330204..158330217,+#_39a14e872ad16e53a4584126632e1c9fp2@ENST00000448698
8.99e-131FFCP PHASE2:Hg19::chr7:158330204..158330217,+#_39a14e872ad16e53a4584126632e1c9fp2@ENST00000448698
3.07e-86FFCP PHASE1:Mm9::chr10:85587155..85587188,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:85587155..85587188, +
3.07e-86FFCP PHASE2:Mm9::chr14:8928284..8928331,+#_f7085926695310bcdd36d5f7658fb7b6p@chr14:8928284..8928331, +
3.07e-86FFCP PHASE1:Mm9::chr17:34798597..34798606,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:34798597..34798606, +
3.07e-86FFCP PHASE1:Mm9::chr12:25364645..25364655,+#_f7085926695310bcdd36d5f7658fb7b6p@chr12:25364645..25364655, +
3.07e-86FFCP PHASE2:Mm9::chr12:81955014..81955018,+#_f7085926695310bcdd36d5f7658fb7b6p@chr12:81955014..81955018, +
3.07e-86FFCP PHASE1:Mm9::chr11:68437375..68437378,+#_f7085926695310bcdd36d5f7658fb7b6p@chr11:68437375..68437378, +
3.07e-86FFCP PHASE2:Mm9::chr5:124112234..124112240,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:124112234..124112240, +
3.07e-86FFCP PHASE2:Mm9::chr8:127816016..127816021,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:127816016..127816021, +
3.07e-86FFCP PHASE2:Mm9::chr10:85585991..85586025,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:85585991..85586025, -
3.07e-86FFCP PHASE2:Mm9::chr12:85288471..85288502,+#_f7085926695310bcdd36d5f7658fb7b6p@chr12:85288471..85288502, +
3.07e-86FFCP PHASE1:Mm9::chr6:34549876..34549892,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:34549876..34549892, -
3.07e-86FFCP PHASE1:Mm9::chr18:38831400..38831402,-#_f7085926695310bcdd36d5f7658fb7b6p@chr18:38831400..38831402, -
3.07e-86FFCP PHASE1:Mm9::chr13:113542610..113542614,+#_f7085926695310bcdd36d5f7658fb7b6p@chr13:113542610..113542614, +
3.07e-86FFCP PHASE2:Mm9::chr10:8471698..8471701,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:8471698..8471701, +
3.07e-86FFCP PHASE1:Mm9::chr11:117829935..117829959,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:117829935..117829959, -
3.07e-86FFCP PHASE2:Mm9::chr5:53111093..53111095,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:53111093..53111095, +
3.07e-86FFCP PHASE2:Mm9::chr13:96429295..96429302,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:96429295..96429302, -
3.07e-86FFCP PHASE2:Mm9::chr12:25364645..25364655,+#_f7085926695310bcdd36d5f7658fb7b6p@chr12:25364645..25364655, +
3.07e-86FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_f7085926695310bcdd36d5f7658fb7b6p@chr19:29573929..29573932, +
3.07e-86FFCP PHASE1:Mm9::chr7:87919399..87919406,+#_f7085926695310bcdd36d5f7658fb7b6p@chr7:87919399..87919406, +
3.07e-86FFCP PHASE2:Mm9::chr18:35900327..35900366,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:35900327..35900366, +
3.07e-86FFCP PHASE2:Mm9::chr4:57687477..57687488,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:57687477..57687488, +
3.07e-86FFCP PHASE1:Mm9::chr18:44793802..44793835,+#_f7085926695310bcdd36d5f7658fb7b6p@chr18:44793802..44793835, +
3.07e-86FFCP PHASE1:Mm9::chr6:92938260..92938264,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:92938260..92938264, -
3.07e-86FFCP PHASE2:Mm9::chr8:25530071..25530072,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:25530071..25530072, +
3.07e-86FFCP PHASE2:Mm9::chr12:74684893..74684910,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:74684893..74684910, -
3.07e-86FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:126939557..126939562, +
3.07e-86FFCP PHASE1:Mm9::chr13:5840965..5840966,+#_f7085926695310bcdd36d5f7658fb7b6p@chr13:5840965..5840966, +
3.07e-86FFCP PHASE1:Mm9::chr5:33088768..33088773,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:33088768..33088773, +
3.07e-86FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:34798555..34798562, +
3.07e-86FFCP PHASE2:Mm9::chr16:91441786..91441787,-#_f7085926695310bcdd36d5f7658fb7b6p@chr16:91441786..91441787, -
3.07e-86FFCP PHASE1:Mm9::chr2:84756280..84756286,+#_f7085926695310bcdd36d5f7658fb7b6p@chr2:84756280..84756286, +
3.07e-86FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_f7085926695310bcdd36d5f7658fb7b6p8@Il3ra
3.07e-86FFCP PHASE1:Mm9::chr1:173044327..173044331,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:173044327..173044331, +
3.07e-86FFCP PHASE1:Mm9::chr14:8928284..8928331,+#_f7085926695310bcdd36d5f7658fb7b6p@chr14:8928284..8928331, +
3.07e-86FFCP PHASE2:Mm9::chr11:118287827..118287833,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:118287827..118287833, -
3.07e-86FFCP PHASE2:Mm9::chr6:129180613..129180616,+#_f7085926695310bcdd36d5f7658fb7b6p@chr6:129180613..129180616, +
3.07e-86FFCP PHASE1:Mm9::chr11:118287827..118287833,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:118287827..118287833, -
3.07e-86FFCP PHASE1:Mm9::chr4:86335502..86335509,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:86335502..86335509, +
3.07e-86FFCP PHASE1:Mm9::chr10:8471698..8471701,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:8471698..8471701, +
3.07e-86FFCP PHASE2:Mm9::chr4:137487112..137487117,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:137487112..137487117, +
3.07e-86FFCP PHASE2:Mm9::chr17:35093764..35093773,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35093764..35093773, -
3.07e-86FFCP PHASE2:Mm9::chr10:94580525..94580530,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:94580525..94580530, +
3.07e-86FFCP PHASE2:Mm9::chr12:8400090..8400093,+#_f7085926695310bcdd36d5f7658fb7b6p@chr12:8400090..8400093, +
3.07e-86FFCP PHASE2:Mm9::chr1:173044327..173044331,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:173044327..173044331, +
3.07e-86FFCP PHASE2:Mm9::chr9:42915101..42915106,-#_f7085926695310bcdd36d5f7658fb7b6p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:32912678..32912687, +
3.07e-86FFCP PHASE2:Mm9::chr11:117737077..117737096,-#_f7085926695310bcdd36d5f7658fb7b6p@chr11:117737077..117737096, -
3.07e-86FFCP PHASE1:Mm9::chr10:93942324..93942342,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:93942324..93942342, -
3.07e-86FFCP PHASE2:Mm9::chr10:93895817..93895819,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:93895817..93895819, -
3.07e-86FFCP PHASE1:Mm9::chr15:32178407..32178408,-#_f7085926695310bcdd36d5f7658fb7b6p@chr15:32178407..32178408, -
3.07e-86FFCP PHASE2:Mm9::chr10:8586393..8586401,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:8586393..8586401, +
3.07e-86FFCP PHASE2:Mm9::chr10:117419958..117419964,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:117419958..117419964, +
3.07e-86FFCP PHASE1:Mm9::chr12:86691503..86691504,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:86691503..86691504, -
3.07e-86FFCP PHASE2:Mm9::chr13:113543694..113543702,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:113543694..113543702, -
3.07e-86FFCP PHASE1:Mm9::chr18:39297570..39297573,-#_f7085926695310bcdd36d5f7658fb7b6p@chr18:39297570..39297573, -
3.07e-86FFCP PHASE1:Mm9::chr14:15179132..15179141,+#_f7085926695310bcdd36d5f7658fb7b6p8@Il3ra
3.07e-86FFCP PHASE2:Mm9::chr2:11935531..11935538,-#_f7085926695310bcdd36d5f7658fb7b6p@chr2:11935531..11935538, -
3.07e-86FFCP PHASE1:Mm9::chr2:11935531..11935538,-#_f7085926695310bcdd36d5f7658fb7b6p@chr2:11935531..11935538, -
3.07e-86FFCP PHASE1:Mm9::chr17:35093377..35093381,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35093377..35093381, +
3.07e-86FFCP PHASE2:Mm9::chr7:87919399..87919406,+#_f7085926695310bcdd36d5f7658fb7b6p@chr7:87919399..87919406, +
3.07e-86FFCP PHASE2:Mm9::chr9:62199266..62199267,+#_f7085926695310bcdd36d5f7658fb7b6p@chr9:62199266..62199267, +
3.07e-86FFCP PHASE2:Mm9::chr10:85586219..85586227,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:85586219..85586227, +
3.07e-86FFCP PHASE2:Mm9::chr3:9705000..9705004,-#_f7085926695310bcdd36d5f7658fb7b6p4@Pag1
3.07e-86FFCP PHASE2:Mm9::chr1:66883923..66883955,-#_f7085926695310bcdd36d5f7658fb7b6p@chr1:66883923..66883955, -
3.07e-86FFCP PHASE2:Mm9::chr17:67870501..67870507,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:67870501..67870507, +
3.07e-86FFCP PHASE2:Mm9::chr8:87745380..87745385,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr17:24807620..24807650,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:24807620..24807650, -
3.07e-86FFCP PHASE1:Mm9::chr15:82193340..82193343,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:82193340..82193343, +
3.07e-86FFCP PHASE2:Mm9::chr17:35106363..35106372,-#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35106363..35106372, -
3.07e-86FFCP PHASE2:Mm9::chr7:118133901..118133904,-#_f7085926695310bcdd36d5f7658fb7b6p@chr7:118133901..118133904, -
3.07e-86FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:87745380..87745385, +
3.07e-86FFCP PHASE1:Mm9::chr13:113543694..113543702,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:113543694..113543702, -
3.07e-86FFCP PHASE2:Mm9::chr10:60279719..60279737,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:60279719..60279737, -
3.07e-86FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:3311867..3311873, +
3.07e-86FFCP PHASE1:Mm9::chr18:35881716..35881727,-#_f7085926695310bcdd36d5f7658fb7b6p@chr18:35881716..35881727, -
3.07e-86FFCP PHASE1:Mm9::chr13:96429295..96429302,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:96429295..96429302, -
3.07e-86FFCP PHASE2:Mm9::chr13:96429602..96429605,-#_f7085926695310bcdd36d5f7658fb7b6p@chr13:96429602..96429605, -
3.07e-86FFCP PHASE2:Mm9::chr5:76329688..76329692,-#_f7085926695310bcdd36d5f7658fb7b6p@chr5:76329688..76329692, -
3.07e-86FFCP PHASE2:Mm9::chr7:117101788..117101793,+#_f7085926695310bcdd36d5f7658fb7b6p@chr7:117101788..117101793, +
3.07e-86FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_f7085926695310bcdd36d5f7658fb7b6p@chr8:86713876..86713879, +
3.07e-86FFCP PHASE1:Mm9::chr10:117419958..117419964,+#_f7085926695310bcdd36d5f7658fb7b6p@chr10:117419958..117419964, +
3.07e-86FFCP PHASE1:Mm9::chr12:74684893..74684910,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:74684893..74684910, -
3.07e-86FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_f7085926695310bcdd36d5f7658fb7b6p@chrX:166418658..166418683, +
3.07e-86FFCP PHASE2:Mm9::chr1:163794592..163794593,+#_f7085926695310bcdd36d5f7658fb7b6p@chr1:163794592..163794593, +
3.07e-86FFCP PHASE1:Mm9::chr10:60279719..60279737,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:60279719..60279737, -
3.07e-86FFCP PHASE2:Mm9::chr4:100890388..100890423,+#_f7085926695310bcdd36d5f7658fb7b6p@chr4:100890388..100890423, +
3.07e-86FFCP PHASE2:Mm9::chr12:86691503..86691504,-#_f7085926695310bcdd36d5f7658fb7b6p@chr12:86691503..86691504, -
3.07e-86FFCP PHASE1:Mm9::chr9:42915101..42915106,-#_f7085926695310bcdd36d5f7658fb7b6p@chr9:42915101..42915106, -
3.07e-86FFCP PHASE1:Mm9::chr5:53111093..53111095,+#_f7085926695310bcdd36d5f7658fb7b6p@chr5:53111093..53111095, +
3.07e-86FFCP PHASE2:Mm9::chr15:88669906..88669914,+#_f7085926695310bcdd36d5f7658fb7b6p@chr15:88669906..88669914, +
3.07e-86FFCP PHASE2:Mm9::chr10:93499468..93499494,-#_f7085926695310bcdd36d5f7658fb7b6p@chr10:93499468..93499494, -
3.07e-86FFCP PHASE1:Mm9::chr17:35096519..35096524,+#_f7085926695310bcdd36d5f7658fb7b6p@chr17:35096519..35096524, +
3.07e-86FFCP PHASE1:Mm9::chr16:28911901..28911906,-#_f7085926695310bcdd36d5f7658fb7b6p@chr16:28911901..28911906, -
3.07e-86FFCP PHASE2:Mm9::chr6:15678147..15678149,-#_f7085926695310bcdd36d5f7658fb7b6p@chr6:15678147..15678149, -
3.07e-86FFCP PHASE2:Mm9::chr7:109031260..109031268,+#_f7085926695310bcdd36d5f7658fb7b6p@chr7:109031260..109031268, +
3.07e-86FFCP PHASE2:Mm9::chr11:68437375..68437378,+#_f7085926695310bcdd36d5f7658fb7b6p@chr11:68437375..68437378, +
3.07e-86FFCP PHASE1:Mm9::chr1:66883923..66883955,-#_f7085926695310bcdd36d5f7658fb7b6p@chr1:66883923..66883955, -

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