UBERON:0002067: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0002067
|name=dermis
|namespace=
|def="The dermis is a layer of skin between the epidermis (with which it makes up the skin) and subcutaneous tissues, ...") |
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:14, 15 June 2012
| Name: | dermis | ||
|---|---|---|---|
| Definition: | "The dermis is a layer of skin between the epidermis (with which it makes up the skin) and subcutaneous tissues, and is composed of two layers, the papillary and reticular dermis[WP]." [Wikipedia:Dermis, ZFIN:curator] | ||
| Xrefs: |
| ||
| Synonyms: |
"corium" RELATED [BTO:0000294] "cutis" RELATED [BTO:0000294] "vertebrate dermis" EXACT [] | ||
| Comments: | Editor notes: Consider adding a layer-of-skin grouping class for all skin layers | ||
| Alt_id: | UBERON:FMA_70323-MA_0000152-MIAA_0000153-XAO_0000217-ZFA_0001119 | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0004923(organ component layer) |
|---|---|
| develops_from: | UBERON:0003077(paraxial mesoderm),UBERON:0003104(mesenchyme),UBERON:0004016(dermatome),UBERON:0010083(future dermis) |
| part_of: | UBERON:0002097(skin of body),UBERON:0002199(integument) |
Children
| develops from: | UBERON:0004756 (dermal skeletal element) |
|---|---|
| part of: | UBERON:0001992 (papillary layer of dermis),CL:0002551 (fibroblast of dermis) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11269-116G9 (Fibroblast - Dermal, donor1)
- 11271-116H2 (Hair Follicle Dermal Papilla Cells, donor1)
- 11346-117G5 (Fibroblast - Dermal, donor2)
- 11348-117G7 (Hair Follicle Dermal Papilla Cells, donor2)
- 11418-118F5 (Fibroblast - Dermal, donor3)
- 11420-118F7 (Hair Follicle Dermal Papilla Cells, donor3)
- 11450-119A1 (Fibroblast - Dermal, donor4)
- 11454-119A5 (Fibroblast - Dermal, donor5)
- 11458-119A9 (Fibroblast - Dermal, donor6)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002067 (dermis), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.31e-68 | FFCP PHASE2:Hg19::chr1:45087872..45087892,+#_73a5fe415b7ca65484bdfc742826348d | p@chr1:45087872..45087892, + |
| 1.31e-68 | FFCP PHASE1:Hg19::chr1:45087872..45087892,+#_73a5fe415b7ca65484bdfc742826348d | p@chr1:45087872..45087892, + |
| 9.25e-50 | FFCP PHASE1:Hg19::chr7:107707064..107707079,-#_83d7fbf3a7befa7de290a45886be4910 | p@chr7:107707064..107707079, - |
| 9.25e-50 | FFCP PHASE2:Hg19::chr7:107707064..107707079,-#_83d7fbf3a7befa7de290a45886be4910 | p@chr7:107707064..107707079, - |
| 9.25e-50 | FFCP PHASE1:Hg19::chr7:107707083..107707099,-#_83d7fbf3a7befa7de290a45886be4910 | p@chr7:107707083..107707099, - |
| 9.25e-50 | FFCP PHASE2:Hg19::chr7:107707083..107707099,-#_83d7fbf3a7befa7de290a45886be4910 | p@chr7:107707083..107707099, - |
| 9.89e-40 | FFCP PHASE2:Hg19::chr10:124254447..124254458,-#_70b5dd352ade128910bdd82040833306 | p@chr10:124254447..124254458, - |
| 9.89e-40 | FFCP PHASE1:Hg19::chr10:124254447..124254458,-#_70b5dd352ade128910bdd82040833306 | p@chr10:124254447..124254458, - |
| 1.21e-39 | FFCP PHASE1:Hg19::chr1:10228206..10228218,+#_474993e40a080f515fefa529e8cce632 | p@chr1:10228206..10228218, + |
| 1.21e-39 | FFCP PHASE2:Hg19::chr1:10228206..10228218,+#_474993e40a080f515fefa529e8cce632 | p@chr1:10228206..10228218, + |
| 5.08e-38 | FFCP PHASE2:Hg19::chr6:5498703..5498727,+#_3f9a54ca105947556fa5031d3b942884 | p@chr6:5498703..5498727, + |
| 5.08e-38 | FFCP PHASE1:Hg19::chr6:5498703..5498727,+#_3f9a54ca105947556fa5031d3b942884 | p@chr6:5498703..5498727, + |
| 2.83e-35 | FFCP PHASE2:Hg19::chr8:128387795..128387801,+#_86141da7369306346e1d7fcfad6e08f6 | p@chr8:128387795..128387801, + |
| 2.83e-35 | FFCP PHASE1:Hg19::chr8:128387795..128387801,+#_86141da7369306346e1d7fcfad6e08f6 | p@chr8:128387795..128387801, + |
| 1.55e-33 | FFCP PHASE2:Hg19::chr1:45088343..45088354,+#_7bd56040ab10bf8a0e52e3ed8f20d8ca | p@chr1:45088343..45088354, + |
| 1.55e-33 | FFCP PHASE1:Hg19::chr1:45088343..45088354,+#_7bd56040ab10bf8a0e52e3ed8f20d8ca | p@chr1:45088343..45088354, + |
| 5.64e-29 | FFCP PHASE2:Hg19::chr7:98258032..98258045,+#_610f64bf5c24b08515d2c07ef60c9fe5 | p@chr7:98258032..98258045, + |
| 5.64e-29 | FFCP PHASE1:Hg19::chr7:98258032..98258045,+#_610f64bf5c24b08515d2c07ef60c9fe5 | p@chr7:98258032..98258045, + |
| 7.57e-28 | FFCP PHASE2:Hg19::chr10:31071229..31071236,+#_046bda63a381043f46a7064c56d8bb9b | p@chr10:31071229..31071236, + |
| 7.57e-28 | FFCP PHASE1:Hg19::chr10:31071229..31071236,+#_046bda63a381043f46a7064c56d8bb9b | p@chr10:31071229..31071236, + |
| 1.12e-26 | FFCP PHASE1:Hg19::chr5:33794920..33794939,-#_9a62e126fea2d1795cb0c0c25f092ca9 | p@chr5:33794920..33794939, - |
| 1.12e-26 | FFCP PHASE2:Hg19::chr5:33794920..33794939,-#_9a62e126fea2d1795cb0c0c25f092ca9 | p@chr5:33794920..33794939, - |
| 1.47e-26 | FFCP PHASE2:Hg19::chr21:47405899..47405911,+#_497ee5b4c828ab5bbf65f00766dc5c2e | p@chr21:47405899..47405911, + |
| 1.47e-26 | FFCP PHASE1:Hg19::chr21:47405899..47405911,+#_497ee5b4c828ab5bbf65f00766dc5c2e | p@chr21:47405899..47405911, + |
| 1.5e-25 | FFCP PHASE1:Hg19::chr17:38174999..38175001,+#_ff89e28a3d6aea3b34c0121975f4f106 | p8@CASC3 |
| 1.5e-25 | FFCP PHASE2:Hg19::chr4:89454373..89454379,-#_ff89e28a3d6aea3b34c0121975f4f106 | p@chr4:89454373..89454379, - |
| 1.5e-25 | FFCP PHASE2:Hg19::chr17:38174999..38175001,+#_ff89e28a3d6aea3b34c0121975f4f106 | p8@CASC3 |
| 1.5e-25 | FFCP PHASE1:Hg19::chr4:89454373..89454379,-#_ff89e28a3d6aea3b34c0121975f4f106 | p@chr4:89454373..89454379, - |
| 2.99e-25 | FFCP PHASE2:Hg19::chr8:141656896..141656918,-#_8aaa078761cdfb0bca575125dab819fc | p@chr8:141656896..141656918, - |
| 2.99e-25 | FFCP PHASE1:Hg19::chr8:141656896..141656918,-#_8aaa078761cdfb0bca575125dab819fc | p@chr8:141656896..141656918, - |
| 3.17e-25 | FFCP PHASE1:Hg19::chr2:95983133..95983144,+#_734ddac16dfeb01d14d15eef209df0c1 | p@chr2:95983133..95983144, + |
| 3.17e-25 | FFCP PHASE2:Hg19::chr2:95983133..95983144,+#_734ddac16dfeb01d14d15eef209df0c1 | p@chr2:95983133..95983144, + |
| 2.03e-24 | FFCP PHASE1:Hg19::chr5:33794876..33794902,-#_a3e8e64e44620fb712c82f98eb4fbb82 | p@chr5:33794876..33794902, - |
| 2.03e-24 | FFCP PHASE2:Hg19::chr5:33794876..33794902,-#_a3e8e64e44620fb712c82f98eb4fbb82 | p@chr5:33794876..33794902, - |
| 2.4e-24 | FFCP PHASE2:Hg19::chr5:174252830..174252847,+#_3961e80021c6c4ac3b3475561ae8c38f | p@chr5:174252830..174252847, + |
| 2.4e-24 | FFCP PHASE1:Hg19::chr5:174252830..174252847,+#_3961e80021c6c4ac3b3475561ae8c38f | p@chr5:174252830..174252847, + |
| 2.92e-24 | FFCP PHASE2:Hg19::chr4:127699583..127699608,-#_b1213e2ceb0b12210879ddf8bef5caeb | p@chr4:127699583..127699608, - |
| 2.92e-24 | FFCP PHASE1:Hg19::chr4:127699583..127699608,-#_b1213e2ceb0b12210879ddf8bef5caeb | p@chr4:127699583..127699608, - |
| 1.68e-23 | FFCP PHASE2:Hg19::chr4:127876558..127876592,-#_bc534413383b7379f99a99a8fb3c328c | p1@ENST00000515428 |
| 1.68e-23 | FFCP PHASE1:Hg19::chr4:127876558..127876592,-#_bc534413383b7379f99a99a8fb3c328c | p1@ENST00000515428 |
| 2.62e-23 | FFCP PHASE1:Hg19::chr7:127963997..127964004,-#_99be5715d44e1f0d829194fbc837a0ba | p@chr7:127963997..127964004, - |
| 2.62e-23 | FFCP PHASE2:Hg19::chr7:127963997..127964004,-#_99be5715d44e1f0d829194fbc837a0ba | p@chr7:127963997..127964004, - |
| 3.32e-23 | FFCP PHASE1:Hg19::chr17:813116..813132,+#_9c331ac2c2def4dfc4c6cd03e66e2d49 | p@chr17:813116..813132, + |
| 3.32e-23 | FFCP PHASE2:Hg19::chr17:813116..813132,+#_9c331ac2c2def4dfc4c6cd03e66e2d49 | p@chr17:813116..813132, + |
| 6.41e-23 | FFCP PHASE2:Hg19::chr16:85617034..85617043,-#_bcb629a8b3ff824d199c6666b8dd49b2 | p@chr16:85617034..85617043, - |
| 6.41e-23 | FFCP PHASE1:Hg19::chr16:85617034..85617043,-#_bcb629a8b3ff824d199c6666b8dd49b2 | p@chr16:85617034..85617043, - |
| 7.17e-23 | FFCP PHASE1:Hg19::chr5:177652352..177652356,-#_e619161e9360c085006bd0eeb42eb676 | p6@AGXT2L2 |
| 7.17e-23 | FFCP PHASE2:Hg19::chr5:177652352..177652356,-#_e619161e9360c085006bd0eeb42eb676 | p6@AGXT2L2 |
| 7.17e-23 | FFCP PHASE2:Hg19::chr5:174252850..174252859,+#_e619161e9360c085006bd0eeb42eb676 | p@chr5:174252850..174252859, + |
| 7.17e-23 | FFCP PHASE1:Hg19::chr5:174252850..174252859,+#_e619161e9360c085006bd0eeb42eb676 | p@chr5:174252850..174252859, + |
| 4.19e-22 | FFCP PHASE1:Hg19::chr5:33794904..33794916,-#_ed598c139a2131b8b73c398609bec48d | p@chr5:33794904..33794916, - |
| 4.19e-22 | FFCP PHASE2:Hg19::chr5:33794904..33794916,-#_ed598c139a2131b8b73c398609bec48d | p@chr5:33794904..33794916, - |
| 3.14e-21 | FFCP PHASE2:Hg19::chr11:122051600..122051617,+#_6f54d0e495c3bbd898fc5fd9f46b4d80 | p@chr11:122051600..122051617, + |
| 3.14e-21 | FFCP PHASE1:Hg19::chr11:122051600..122051617,+#_6f54d0e495c3bbd898fc5fd9f46b4d80 | p@chr11:122051600..122051617, + |
| 7.71e-21 | FFCP PHASE2:Hg19::chr21:36208749..36208768,+#_9d79ad6f447872beae5f10b3e1476678 | p@chr21:36208749..36208768, + |
| 7.71e-21 | FFCP PHASE1:Hg19::chr21:36208749..36208768,+#_9d79ad6f447872beae5f10b3e1476678 | p@chr21:36208749..36208768, + |
| 8.88e-21 | FFCP PHASE2:Hg19::chr20:940152..940156,-#_7506eb14b15990149eb496937df87027 | p@chr20:940152..940156, - |
| 8.88e-21 | FFCP PHASE1:Hg19::chr20:940152..940156,-#_7506eb14b15990149eb496937df87027 | p@chr20:940152..940156, - |
| 9.8e-21 | FFCP PHASE2:Hg19::chr18:52969844..52969895,-#_143c9f5631ccfa4b71c160c60c8c347a | p27@TCF4 |
| 9.8e-21 | FFCP PHASE1:Hg19::chr18:52969844..52969895,-#_143c9f5631ccfa4b71c160c60c8c347a | p27@TCF4 |
| 1.24e-20 | FFCP PHASE2:Hg19::chr1:45087902..45087912,+#_5a2d99923a3746795931e29a05da8b64 | p@chr1:45087902..45087912, + |
| 1.24e-20 | FFCP PHASE1:Hg19::chr1:45087902..45087912,+#_5a2d99923a3746795931e29a05da8b64 | p@chr1:45087902..45087912, + |
| 1.29e-20 | FFCP PHASE1:Hg19::chr12:66036219..66036262,-#_42d2c65fd910d903d7eecfdfb1d6f5c2 | p1@ENST00000544557 |
| 1.29e-20 | FFCP PHASE2:Hg19::chr12:66036219..66036262,-#_42d2c65fd910d903d7eecfdfb1d6f5c2 | p1@ENST00000544557 |
| 1.32e-20 | FFCP PHASE2:Hg19::chr7:152549181..152549213,+#_c9d0ab832f95fcd100382eb68c9b3f3f | p@chr7:152549181..152549213, + |
| 1.32e-20 | FFCP PHASE1:Hg19::chr7:152549181..152549213,+#_c9d0ab832f95fcd100382eb68c9b3f3f | p@chr7:152549181..152549213, + |
| 1.73e-20 | FFCP PHASE1:Hg19::chr1:119530682..119530692,-#_c5ba0e7673122a5781d0b306c4b1a29c | p10@TBX15 |
| 1.73e-20 | FFCP PHASE2:Hg19::chr1:119530682..119530692,-#_c5ba0e7673122a5781d0b306c4b1a29c | p10@TBX15 |
| 2.11e-20 | FFCP PHASE2:Hg19::chr17:73682761..73682766,+#_76845917640f73793a5284815887a905 | p@chr17:73682761..73682766, + |
| 2.11e-20 | FFCP PHASE1:Hg19::chr17:73682761..73682766,+#_76845917640f73793a5284815887a905 | p@chr17:73682761..73682766, + |
| 4.35e-19 | FFCP PHASE1:Hg19::chr14:38371323..38371347,-#_c28d560026fc89e3a7f451ebbc0a1ca6 | p1@ENST00000554257, p1@uc001wuk.1 |
| 4.35e-19 | FFCP PHASE2:Hg19::chr14:38371323..38371347,-#_c28d560026fc89e3a7f451ebbc0a1ca6 | p1@ENST00000554257, p1@uc001wuk.1 |
| 4.67e-19 | FFCP PHASE2:Hg19::chr21:47404148..47404163,+#_067d3581df4479a43f054699b98c6079 | p@chr21:47404148..47404163, + |
| 4.67e-19 | FFCP PHASE1:Hg19::chr21:47404148..47404163,+#_067d3581df4479a43f054699b98c6079 | p@chr21:47404148..47404163, + |
| 5.29e-19 | FFCP PHASE2:Hg19::chr4:5754385..5754405,+#_28b5033bd52d339a14409772175ff83a | p3@EVC |
| 5.29e-19 | FFCP PHASE1:Hg19::chr4:5754385..5754405,+#_28b5033bd52d339a14409772175ff83a | p3@EVC |
| 1.22e-18 | FFCP PHASE1:Hg19::chr2:177022022..177022060,+#_06fc5fd1fc973e779bd0bccfa3523cf6 | p@chr2:177022022..177022060, + |
| 1.22e-18 | FFCP PHASE2:Hg19::chr2:177022022..177022060,+#_06fc5fd1fc973e779bd0bccfa3523cf6 | p@chr2:177022022..177022060, + |
| 1.35e-18 | FFCP PHASE2:Hg19::chr12:2163623..2163634,+#_02b5c23bbd882832a4773914bb5deb2e | p@chr12:2163623..2163634, + |
| 1.35e-18 | FFCP PHASE1:Hg19::chr12:5198401..5198415,+#_02b5c23bbd882832a4773914bb5deb2e | p@chr12:5198401..5198415, + |
| 1.35e-18 | FFCP PHASE2:Hg19::chr12:5198401..5198415,+#_02b5c23bbd882832a4773914bb5deb2e | p@chr12:5198401..5198415, + |
| 1.35e-18 | FFCP PHASE1:Hg19::chr12:2163623..2163634,+#_02b5c23bbd882832a4773914bb5deb2e | p@chr12:2163623..2163634, + |
| 1.51e-17 | FFCP PHASE1:Hg19::chr2:201474023..201474035,+#_21c1055b7d754aeb90af6a110e2dcfb0 | p5@AOX1 |
| 1.51e-17 | FFCP PHASE2:Hg19::chr2:201474023..201474035,+#_21c1055b7d754aeb90af6a110e2dcfb0 | p5@AOX1 |
| 3.53e-17 | FFCP PHASE1:Hg19::chr12:66036083..66036098,-#_3bfc1a4bf3509f0c05cc4d3fb614314c | p3@ENST00000539653 |
| 3.53e-17 | FFCP PHASE2:Hg19::chr12:66036083..66036098,-#_3bfc1a4bf3509f0c05cc4d3fb614314c | p3@ENST00000539653 |
| 4.17e-17 | FFCP PHASE2:Hg19::chrX:118362928..118362933,+#_c9daf3dffe3124a44434e27e33199ef8 | p@chrX:118362928..118362933, + |
| 4.17e-17 | FFCP PHASE1:Hg19::chrX:118362928..118362933,+#_c9daf3dffe3124a44434e27e33199ef8 | p@chrX:118362928..118362933, + |
| 4.92e-17 | FFCP PHASE2:Hg19::chr4:81159520..81159523,+#_02b625b5f69b0559649f7fc0c2df37c4 | p@chr4:81159520..81159523, + |
| 4.92e-17 | FFCP PHASE1:Hg19::chr4:81159520..81159523,+#_02b625b5f69b0559649f7fc0c2df37c4 | p@chr4:81159520..81159523, + |
| 7.89e-17 | FFCP PHASE1:Hg19::chr2:177502906..177502920,-#_d3c4197e4f45cbb8c05259525af8057b | p2@ENST00000295549, p2@uc002ukz.1 |
| 7.89e-17 | FFCP PHASE2:Hg19::chr2:177502906..177502920,-#_d3c4197e4f45cbb8c05259525af8057b | p2@ENST00000295549, p2@uc002ukz.1 |
| 8.61e-17 | FFCP PHASE1:Hg19::chr1:85987126..85987173,-#_3fae0e5e2bb1461ffb9b9a6907faa3fd | p@chr1:85987126..85987173, - |
| 8.61e-17 | FFCP PHASE2:Hg19::chr1:85987126..85987173,-#_3fae0e5e2bb1461ffb9b9a6907faa3fd | p@chr1:85987126..85987173, - |
| 8.66e-17 | FFCP PHASE2:Hg19::chr3:139000423..139000454,+#_aad0518a5dabf6662a30d4cdf2f9ccac | p3@MRPS22 |
| 8.66e-17 | FFCP PHASE1:Hg19::chr3:139000423..139000454,+#_aad0518a5dabf6662a30d4cdf2f9ccac | p3@MRPS22 |
| 9.03e-17 | FFCP PHASE2:Hg19::chr17:46627545..46627560,+#_4965deb446ec377d8d65e14c10795d43 | p@chr17:46627545..46627560, + |
| 9.03e-17 | FFCP PHASE1:Hg19::chr17:46627545..46627560,+#_4965deb446ec377d8d65e14c10795d43 | p@chr17:46627545..46627560, + |
| 1.05e-16 | FFCP PHASE2:Hg19::chr20:4451008..4451026,-#_8bc478fb7fa770443d3be8933d96ec52 | p@chr20:4451008..4451026, - |
| 1.05e-16 | FFCP PHASE1:Hg19::chr20:4451008..4451026,-#_8bc478fb7fa770443d3be8933d96ec52 | p@chr20:4451008..4451026, - |
