FFCP PHASE1:Mm9::chr4:33334519..33334538,-: Difference between revisions
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|id=chr4:33334519..33334538,- | |id=chr4:33334519..33334538,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.01e-09,25;CL:0000075,4.49e-08,7;CL:0000239,2.18e-07,6;CL:0000677,2.18e-07,6;CL:0000584,2.18e-07,6;CL:0000791,6.35e-07,9;CL:0000789,6.35e-07,9;CL:0002420,6.35e-07,9;CL:0002419,6.35e-07,9;CL:0000790,6.35e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!1.16e-08!66 | |ontology_enrichment_uberon=UBERON:0000490!1.16e-08!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,8.66e-10,66;UBERON:0000344,1.54e-07,15;UBERON:0003914,6.28e-07,47;UBERON:0003929,6.49e-07,55;UBERON:0000485,6.50e-07,11 | |||
|phase1_expression=2.24208385946712,33.1526637257393,30.0299497997094,6.65421264875026,5.00895729946347,6.5472916045637,5.13947809310157,15.7530454598723,5.77233760821834,4.91535505276186,1.02730780935303,0.558405112967355,10.2720437958723,8.91688104673774,0.333109761815663,0.809901069559304,0,0.157731082679119,0.685572168028694,0.84877930359606,0.0850432901510698,0.297872853602656,0.783599367416806,11.5194544411253,15.5998311125676,16.0784949952206,10.7690499039769,15.0829862880122,0.570070258369122,0.756090389279792,7.31710685162506,3.81018404075779,0,0,0.288851619751275,1.16364251750945,0.816677425049476,2.92972141515835,1.5626706890476,1.0470474879476,7.64700934440319,2.04913645487534,0.971020706062307,2.14024590558481,2.12891555560981,3.30384153891027,0,0,0.219686182734472,0.194429899074283,0,0,1.67782606057736,4.35217285206807,2.35265659399725,0.514518872071894,0.573066879877513,0.515672092277442,0,0,0,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0,0,0,0.270011876663381,0.210324961351382,0.856952953211411,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0.372798891650601,0.227178579999552,0.377857800533928,12.4641730141721,4.30211938490693,2.03991400112325,2.15881276655127,1.29955283489534,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,2.53518155598025,0,0,0,0.432982082022428,1.01343946190039,2.02209778005913,0.5709193985953,2.58937883647172,0.29688427812965,0.346970653532272,0.304465478312141,0.922461989024234,2.11011696773672,0.117588707135705,0.753999547978053,0.247194967734374,0.578397427679647,0,0.970601099684455,0.220841518460394,0,0,0,0,1.02182822083437,3.23500836165985,2.99951365496704,2.79554499560742,0.149790639404823,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.486723789203273,0.101839363850316,0.746441823660558,1.26361379216837,0.631325567659422,0.130120442962704,0.229902104433473,0.360124259610698,0.90422890701429,0.204109497453984,0.512454881139399,0.187403449119458,0.776110112217047,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0,0.61734640922383,0.199034266818493,0,1.28673953557358,0.568326998791185,0.414251545071004,1.17263029990548,1.2604344302271,1.18372367792605,1.18058539048442,1.23413690309903,2.09280550275367,1.07309360559848,0.233530684734339,2.63295759861569,0.985004784474571,0.486412857275134,0.730999937126662,0.219550115291051,0.402619256281115,0,0.205809224758569,4.29544417878937,2.11560453330835,0.639864751605702,0.464473343720877,0.38660238396628,0.605050573870028,0.444756087689741,0.380451252225118,0.949058123089023,0.823494773620054,5.02670417600539,7.56034593756373,9.35827618171777,0,1.29682829924817,1.1948476395262,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,1.89709611372772,0.590440591918409,0.470996183524124,2.46794327843601,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0.608580364165509,0,1.01850340712568,0.863088412352432,1.94562272130042,6.86403532970204,2.87536413054709,8.93138274404408,9.67316786655138,9.59799736199025,5.02312757861354,27.0168371963486,0,0.189491411770485,0.162964976442026,0,0.469380496577004,0.670025029767263,0,0.195133647857799,0.315270288212382,0.44292937929755,0.797273843287435,0.327726629431476,0.172684981865896,0,1.50791283939272,1.08781136763742,0.983528546038072,0.275936746304732,0.481651769963376,0.234423373184406,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0.709700426041343,0.35613120733451,0,0.164970122972535,0,0,1.209294227859,0,0,0.307435147943927,0.775284879504663,1.09060118843252,0,0,0,0,2.7235168460303,0.540183282093931,0.388076051348264,1.07168517515796,1.59606210278046,0.535106452806212,0.987294123612726,0.304464949114599,0.23467170806371,0.63549621259146,0.882113592219848,0,0.322928853391811,0.72375509913787,0.119372344003136,0.164140899745061,2.33184669303881,0.370850604021019,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0.457556346413045,9.85874893964361,12.0358248998346,10.3649980353318,0,0.632671987162271,0.609958401380546,0.432021363287205,0.209088296014469,0.436725127492355,0.269728692769641,1.65306911450672,1.30877970992015,0.388844919875379,0,1.12738587736838,0.299033092087958,0.330916980914195,0.194451188344048,0.258319646955462,0,0.234714477291508,0.39061315453185,0.524296722128554,1.20792060413003,1.15212002503146,0.316011120628178,0,0.410843828659309,0.25984164595559,1.07416017400489,0.79472541912506,0.600977247599844,0.147689527174577,0.403865799792591,0.838274873204998,0.705783295957884,0.38983152295901,0.962118416403295,0.233753804363138,0,0.221985953374065,0.0897138566094757,0,0.19318959403219,0.93841237725591,0,0.643105137237198,0.501572104035363,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0.900642406448441,0,0,0,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,0.919217542250071,0.666740183404846,0.618105171716683,0.9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|phase1_expression=2.24208385946712,33.1526637257393,30.0299497997094,6.65421264875026,5.00895729946347,6.5472916045637,5.13947809310157,15.7530454598723,5.77233760821834,4.91535505276186,1.02730780935303,0.558405112967355,10.2720437958723,8.91688104673774,0.333109761815663,0.809901069559304,0,0.157731082679119,0.685572168028694,0.84877930359606,0.0850432901510698,0.297872853602656,0.783599367416806,11.5194544411253,15.5998311125676,16.0784949952206,10.7690499039769,15.0829862880122,0.570070258369122,0.756090389279792,7.31710685162506,3.81018404075779,0,0,0.288851619751275,1.16364251750945,0.816677425049476,2.92972141515835,1.5626706890476,1.0470474879476,7.64700934440319,2.04913645487534,0.971020706062307,2.14024590558481,2.12891555560981,3.30384153891027,0,0,0.219686182734472,0.194429899074283,0,0,1.67782606057736,4.35217285206807,2.35265659399725,0.514518872071894,0.573066879877513,0.515672092277442,0,0,0,0.338844532069132,0,0,0.988866362566974,0.7104801149461,0,0,0,0.270011876663381,0.210324961351382,0.856952953211411,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0.372798891650601,0.227178579999552,0.377857800533928,12.4641730141721,4.30211938490693,2.03991400112325,2.15881276655127,1.29955283489534,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,2.53518155598025,0,0,0,0.432982082022428,1.01343946190039,2.02209778005913,0.5709193985953,2.58937883647172,0.29688427812965,0.346970653532272,0.304465478312141,0.922461989024234,2.11011696773672,0.117588707135705,0.753999547978053,0.247194967734374,0.578397427679647,0,0.970601099684455,0.220841518460394,0,0,0,0,1.02182822083437,3.23500836165985,2.99951365496704,2.79554499560742,0.149790639404823,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0.486723789203273,0.101839363850316,0.746441823660558,1.26361379216837,0.631325567659422,0.130120442962704,0.229902104433473,0.360124259610698,0.90422890701429,0.204109497453984,0.512454881139399,0.187403449119458,0.776110112217047,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0,0.61734640922383,0.199034266818493,0,1.28673953557358,0.568326998791185,0.414251545071004,1.17263029990548,1.2604344302271,1.18372367792605,1.18058539048442,1.23413690309903,2.09280550275367,1.07309360559848,0.233530684734339,2.63295759861569,0.985004784474571,0.486412857275134,0.730999937126662,0.219550115291051,0.402619256281115,0,0.205809224758569,4.29544417878937,2.11560453330835,0.639864751605702,0.464473343720877,0.38660238396628,0.605050573870028,0.444756087689741,0.380451252225118,0.949058123089023,0.823494773620054,5.02670417600539,7.56034593756373,9.35827618171777,0,1.29682829924817,1.1948476395262,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,1.89709611372772,0.590440591918409,0.470996183524124,2.46794327843601,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0.608580364165509,0,1.01850340712568,0.863088412352432,1.94562272130042,6.86403532970204,2.87536413054709,8.93138274404408,9.67316786655138,9.59799736199025,5.02312757861354,27.0168371963486,0,0.189491411770485,0.162964976442026,0,0.469380496577004,0.670025029767263,0,0.195133647857799,0.315270288212382,0.44292937929755,0.797273843287435,0.327726629431476,0.172684981865896,0,1.50791283939272,1.08781136763742,0.983528546038072,0.275936746304732,0.481651769963376,0.234423373184406,0,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0.321321316421807,0.709700426041343,0.35613120733451,0,0.164970122972535,0,0,1.209294227859,0,0,0.307435147943927,0.775284879504663,1.09060118843252,0,0,0,0,2.7235168460303,0.540183282093931,0.388076051348264,1.07168517515796,1.59606210278046,0.535106452806212,0.987294123612726,0.304464949114599,0.23467170806371,0.63549621259146,0.882113592219848,0,0.322928853391811,0.72375509913787,0.119372344003136,0.164140899745061,2.33184669303881,0.370850604021019,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0.457556346413045,9.85874893964361,12.0358248998346,10.3649980353318,0,0.632671987162271,0.609958401380546,0.432021363287205,0.209088296014469,0.436725127492355,0.269728692769641,1.65306911450672,1.30877970992015,0.388844919875379,0,1.12738587736838,0.299033092087958,0.330916980914195,0.194451188344048,0.258319646955462,0,0.234714477291508,0.39061315453185,0.524296722128554,1.20792060413003,1.15212002503146,0.316011120628178,0,0.410843828659309,0.25984164595559,1.07416017400489,0.79472541912506,0.600977247599844,0.147689527174577,0.403865799792591,0.838274873204998,0.705783295957884,0.38983152295901,0.962118416403295,0.233753804363138,0,0.221985953374065,0.0897138566094757,0,0.19318959403219,0.93841237725591,0,0.643105137237198,0.501572104035363,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0.900642406448441,0,0,0,0.399024873401031,0.341467211508268,0.486213434136588,0.209613162627982,0.919217542250071,0.666740183404846,0.618105171716683,0.9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| ||
|short_description=p5@Pnrc1 | |short_description=p5@Pnrc1 | ||
}} | }} | ||
Revision as of 13:49, 13 November 2012
| Short description: | p5@Pnrc1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Pnrc1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 11bp_to_ENSMUST00000155616_5end |
| EntrezGene: | Pnrc1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.01e-09 | 25 |
| columnar/cuboidal epithelial cell | 4.49e-08 | 7 |
| brush border epithelial cell | 2.18e-07 | 6 |
| gut absorptive cell | 2.18e-07 | 6 |
| enterocyte | 2.18e-07 | 6 |
| mature alpha-beta T cell | 6.35e-07 | 9 |
| alpha-beta T cell | 6.35e-07 | 9 |
| immature T cell | 6.35e-07 | 9 |
| mature T cell | 6.35e-07 | 9 |
| immature alpha-beta T cell | 6.35e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| unilaminar epithelium | 8.66e-10 | 66 |
| mucosa | 1.54e-07 | 15 |
| epithelial tube | 6.28e-07 | 47 |
| gut epithelium | 6.49e-07 | 55 |
| simple columnar epithelium | 6.50e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
