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FFCP PHASE1:Mm9::chr11:115336959..115337041,+: Difference between revisions

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|id=chr11:115336959..115337041,+
|id=chr11:115336959..115337041,+
|ontology_enrichment_celltype=CL:0002371!1.79e-09!118;CL:0000144!8.10e-09!121;CL:0000012!8.10e-09!121;CL:0000548!3.68e-08!115;CL:0000004!3.68e-08!115;CL:0000255!3.68e-08!115;CL:0002321!6.82e-08!70;CL:0000220!6.82e-08!70;CL:0000117!2.14e-07!23;CL:0000337!2.14e-07!23;CL:0000723!2.18e-07!91;CL:0000048!2.18e-07!91
|ontology_enrichment_celltype=CL:0002371!1.79e-09!118;CL:0000144!8.10e-09!121;CL:0000012!8.10e-09!121;CL:0000548!3.68e-08!115;CL:0000004!3.68e-08!115;CL:0000255!3.68e-08!115;CL:0002321!6.82e-08!70;CL:0000220!6.82e-08!70;CL:0000117!2.14e-07!23;CL:0000337!2.14e-07!23;CL:0000723!2.18e-07!91;CL:0000048!2.18e-07!91
|ontology_enrichment_celltype_v019_2=CL:0002321,6.82e-08,70;CL:0000117,2.14e-07,23;CL:0000337,2.14e-07,23;CL:0000723,2.18e-07,91;CL:0000048,2.18e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000064!3.44e-13!99;UBERON:0002193!1.25e-10!48;UBERON:0002390!1.10e-09!45;UBERON:0003061!1.10e-09!45;UBERON:0002370!1.78e-08!23;UBERON:0000974!1.78e-08!23;UBERON:0004807!1.78e-08!23;UBERON:0005058!1.78e-08!23;UBERON:0003351!1.78e-08!23;UBERON:0009113!1.78e-08!23;UBERON:0003295!1.78e-08!23;UBERON:0009722!1.78e-08!23;UBERON:0005562!1.78e-08!23;UBERON:0007690!1.78e-08!23;UBERON:0006562!3.50e-08!24;UBERON:0001557!3.50e-08!24;UBERON:0001042!3.50e-08!24;UBERON:0008814!3.50e-08!24;UBERON:0009145!3.50e-08!24;UBERON:0003408!6.85e-08!24;UBERON:0004177!7.37e-08!29;UBERON:0000072!2.10e-07!27;UBERON:0007023!8.00e-07!51
|ontology_enrichment_uberon=UBERON:0000064!3.44e-13!99;UBERON:0002193!1.25e-10!48;UBERON:0002390!1.10e-09!45;UBERON:0003061!1.10e-09!45;UBERON:0002370!1.78e-08!23;UBERON:0000974!1.78e-08!23;UBERON:0004807!1.78e-08!23;UBERON:0005058!1.78e-08!23;UBERON:0003351!1.78e-08!23;UBERON:0009113!1.78e-08!23;UBERON:0003295!1.78e-08!23;UBERON:0009722!1.78e-08!23;UBERON:0005562!1.78e-08!23;UBERON:0007690!1.78e-08!23;UBERON:0006562!3.50e-08!24;UBERON:0001557!3.50e-08!24;UBERON:0001042!3.50e-08!24;UBERON:0008814!3.50e-08!24;UBERON:0009145!3.50e-08!24;UBERON:0003408!6.85e-08!24;UBERON:0004177!7.37e-08!29;UBERON:0000072!2.10e-07!27;UBERON:0007023!8.00e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.25e-10,48;UBERON:0002405,1.25e-10,48;UBERON:0002390,1.10e-09,45;UBERON:0003061,1.10e-09,45;UBERON:0002050,7.39e-09,294;UBERON:0000923,7.55e-09,291;UBERON:0010316,7.55e-09,291;UBERON:0005291,7.55e-09,291;UBERON:0006598,7.55e-09,291;UBERON:0010317,7.55e-09,291;UBERON:0002532,7.55e-09,291;UBERON:0002370,1.78e-08,23;UBERON:0000974,1.78e-08,23;UBERON:0004807,1.78e-08,23;UBERON:0005058,1.78e-08,23;UBERON:0003351,1.78e-08,23;UBERON:0009113,1.78e-08,23;UBERON:0003295,1.78e-08,23;UBERON:0009722,1.78e-08,23;UBERON:0005562,1.78e-08,23;UBERON:0007690,1.78e-08,23;UBERON:0000077,2.80e-08,35;UBERON:0006562,3.50e-08,24;UBERON:0001557,3.50e-08,24;UBERON:0001042,3.50e-08,24;UBERON:0008814,3.50e-08,24;UBERON:0009145,3.50e-08,24;UBERON:0003408,6.85e-08,24;UBERON:0004177,7.37e-08,29;UBERON:0005057,7.37e-08,29;UBERON:0011216,1.88e-07,194;UBERON:0000072,2.10e-07,27;UBERON:0007023,8.00e-07,51
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253697,4.42821897369385,2.50905955217362,3.71216358368502,3.2367443132357,4.54594006489348,4.97336289769656,5.4438288782553,3.72803587852155,9.01908701894705,3.73791365109947,4.13646226142744,4.083474955225,3.87479470433193,5.23763989021412,3.52071715937262,4.55715346953825,5.55754525456268,5.79801889982414,5.76060012515731,12.6404448251271,4.66267995167378,4.62199307241723,3.89762468933385,4.833720783022,7.15252877212554,7.09153152167816,8.12292399460175,7.16861794631848,7.62068066549998,7.36031151498936,10.622909000633,8.56285390598932,11.6876902181569,4.53460767230423,4.66170502085536,3.6782681209885,4.7007692581942,5.9888774149979,5.06742683718191,5.67770035228522,4.28736758158132,3.51100472824754,1.6942555278512,3.22227665555024,2.29158205375759,4.29632955859219,4.7955776383945,8.3093328712867,4.05013500139084,7.65546045481175,4.98456649882625,8.28416498802912,3.52876981786201,4.78829848081237,3.92687293234509,4.86213434136588,3.14419743941973,4.22840069435032,3.33370091702423,3.09052585858341,1.28367683836726,1.76888048234658,4.56262739802432,3.9611531691076,3.37109426891577,4.67383612555546,4.47996657853783,2.85776214769844,4.05595140806994,2.12200142510076,2.06042950401653,3.53277408322554,2.74295401908332,2.48466128623072,2.86123427936785,4.0696996657052,2.82328141245992,2.96151127620868,3.65855945745545,2.89376682581627,3.53090695999241,2.24456908663095,3.44041552560105,4.23569274214923,4.09231043169689,3.25367366490529,4.82266527452853,4.99621155875892,2.8071793013449,5.80151845930405,4.3996316375834,3.30887128679273,4.17362104116759
|phase1_expression=3.84357233051505,8.72438519098403,10.4649825059593,9.0739263392049,6.51164448930251,8.39396359559449,7.70921713965235,22.5965816022758,14.2196609373183,14.7460651582856,8.73211637950075,9.01425396647301,27.7345182488553,21.5928393974924,3.99731714178795,5.26435695213547,2.79824751251259,10.7257136221801,12.066070157305,6.79023442876848,5.44277056966847,2.58156473122302,2.87319768052829,5.91971964335605,7.11168771308227,6.89078356938024,7.75371593086335,5.17130958446134,7.9809836171677,7.56090389279792,6.87364583031445,3.17515336729816,7.38077745101484,0,6.35473563452804,4.3221007793208,3.67504841272264,56.0832385187456,39.8481025707138,40.3113282859825,74.1171674919078,56.692775251551,46.6089938909907,6.6725313527056,6.69087746048796,8.07605709511399,13.3006528539167,3.05235218932625,5.4921545683618,4.86074747685709,2.93971485413261,1.43752564364972,7.3824346665404,5.80289713609076,4.36921938885203,4.3734104126111,5.15760191889762,4.12537673821954,10.1158230429799,11.6378015439847,8.87363964908651,4.74382344896785,1.77858959222228,30.5965903875676,32.6325899647102,28.419204597844,11.9840044207362,11.1423308543251,4.66603255388149,7.1553147315796,6.94072372459561,8.85518051651791,8.39300455616131,7.10446635446733,7.28425579738596,6.43453150627015,3.30347642998166,7.02280359468532,6.29786786350598,11.4741070325269,9.42322729104819,11.4600941522487,6.42120897703176,6.19038871034848,7.48711414106369,10.0173719061047,7.26095572075425,7.26957838718672,7.19398836665249,3.92972112555285,12.4641730141721,3.44169550792555,7.47968467078526,3.77792234146472,1.94932925234301,3.58421509677868,4.35377702408431,4.60161870960756,3.11743205523443,3.18005617059306,2.81686839553361,15.3991772897181,7.64415719119937,21.3320010945999,4.32982082022428,4.56047757855178,4.54972000513305,3.9964357901671,16.0541487861246,6.82833839698194,3.64319186208885,1.82679286987285,4.38169444786511,4.22023393547343,5.64425794251383,2.63899841792318,7.16865406429684,3.61498392299779,16.8076004870476,2.91180329905337,2.20841518460394,4.84875253135222,7.45567044872489,4.09893115816166,3.97948742945565,5.10914110417183,1.67741174308288,3.59941638596045,2.54140454146129,7.63932260964596,5.94750783664214,5.78010019719176,7.64827008846016,6.13717097592793,6.44142938134636,2.92034273521964,3.05518091550949,5.349499736234,4.54900965180614,6.10281382070775,5.07469727554544,2.75882525320168,5.04173963454978,5.72678307775717,5.03470093719826,4.35586648968489,4.96619140166563,3.88055056108524,4.74249584452253,4.16033376369202,3.69497360744293,5.69908904311695,2.50242524303038,6.61679116392116,4.52720700097476,4.57778813682534,2.80885274925294,2.83082697826187,3.6941254921427,2.48550927042602,3.75241695969754,3.42117916775928,3.55117103377815,3.93528463494808,3.39387648352232,4.88321283975857,1.87791380979733,2.45207218971056,2.96207729844265,2.95501435342371,2.10778904819225,3.07019973593198,1.97595103761946,3.48936688776967,6.30869845692382,5.24813523134351,9.58214470653014,6.87571473325215,3.62590025909898,3.94802342162745,5.54130083685001,4.43703754171354,4.22518283305254,4.1849637744763,3.32170343081158,5.59976446061637,6.78605063760728,4.97391180102877,6.04388670069272,5.39291645192533,3.8904848977445,5.17767310461355,4.1726938209678,2.85621281524322,3.38123207019241,2.24016460629846,3.29719228184964,4.1380133735288,4.67950374719504,1.91893192373483,2.35498091762062,2.71473760627961,4.15033677922008,3.83743743147016,2.55526693647164,2.9232074610031,2.63718157805054,3.61765739628625,3.31013607315846,6.32931502391783,3.56697498905078,4.3929826110093,4.31304619582064,4.46569137202204,5.30464044294753,4.04126204715379,3.40855085691633,3.37710464954357,6.09685527549795,1.70542270593436,2.60743962307241,2.03694102930226,2.81628297946203,2.34508760418542,3.80869825417622,5.85400943573396,4.41378403497335,4.65075848262427,4.9430978283821,6.39066927391378,5.35323443784276,5.35201516751593,36.1899081454253,28.8270012423916,5.4094070032094,3.03530420935206,4.65596710964597,4.10240903072711,2.95082901678016,2.01976741763498,5.04813151066011,8.19921363022941,3.66219776145758,5.73525115086125,6.01556420022464,6.51076020814315,4.85772842009873,3.21481443702443,4.34816555741176,5.78378369559253,5.25178315270594,4.98583690268315,4.0721739838394,7.4236555337641,7.96470830039777,3.15614827001476,3.62788268357701,3.01768127609437,2.36241514304618,3.99665692327106,5.42699415653264,1.81766864738753,2.85197902707777,2.84433082142234,5.27093042874994,5.15677716240934,2.7235168460303,1.98067203434441,5.30370603509293,4.92975180572662,5.85222771019503,3.92411398724555,3.29098041204242,3.34911444026059,5.63212099352905,6.14313005505079,4.6310963591542,7.4198813823666,4.03661066739764,3.49814964583304,3.22305328808468,3.77524069413641,4.66369338607761,6.30446026835733,8.03093139749908,6.60437977482312,5.18544676635193,3.76736914009382,5.46776910884101,3.43167259809784,3.0596117398894,3.49878630809145,4.56059913554598,8.59203556213602,3.32152793260192,4.06638934253697,4.42821897369385,2.50905955217362,3.71216358368502,3.2367443132357,4.54594006489348,4.97336289769656,5.4438288782553,3.72803587852155,9.01908701894705,3.73791365109947,4.13646226142744,4.083474955225,3.87479470433193,5.23763989021412,3.52071715937262,4.55715346953825,5.55754525456268,5.79801889982414,5.76060012515731,12.6404448251271,4.66267995167378,4.62199307241723,3.89762468933385,4.833720783022,7.15252877212554,7.09153152167816,8.12292399460175,7.16861794631848,7.62068066549998,7.36031151498936,10.622909000633,8.56285390598932,11.6876902181569,4.53460767230423,4.66170502085536,3.6782681209885,4.7007692581942,5.9888774149979,5.06742683718191,5.67770035228522,4.28736758158132,3.51100472824754,1.6942555278512,3.22227665555024,2.29158205375759,4.29632955859219,4.7955776383945,8.3093328712867,4.05013500139084,7.65546045481175,4.98456649882625,8.28416498802912,3.52876981786201,4.78829848081237,3.92687293234509,4.86213434136588,3.14419743941973,4.22840069435032,3.33370091702423,3.09052585858341,1.28367683836726,1.76888048234658,4.56262739802432,3.9611531691076,3.37109426891577,4.67383612555546,4.47996657853783,2.85776214769844,4.05595140806994,2.12200142510076,2.06042950401653,3.53277408322554,2.74295401908332,2.48466128623072,2.86123427936785,4.0696996657052,2.82328141245992,2.96151127620868,3.65855945745545,2.89376682581627,3.53090695999241,2.24456908663095,3.44041552560105,4.23569274214923,4.09231043169689,3.25367366490529,4.82266527452853,4.99621155875892,2.8071793013449,5.80151845930405,4.3996316375834,3.30887128679273,4.17362104116759
|short_description=p1@Armc7
|short_description=p1@Armc7
}}
}}

Revision as of 15:38, 13 November 2012

Short description:p1@Armc7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Armc7_5end
Coexpression cluster:MCL_coexpression_mm9:116
Association with transcript: 0bp_to_ENSMUST00000035240, ENSMUST00000136985, NM_177778, uc007mht.1_5end
EntrezGene:Armc7
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Armc7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.84
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I610.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.07
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.39
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.71
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.60
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.22
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.01
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E427.73
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E821.59
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.07
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.79
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.58
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.11
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I25.17
Ileum epithelium, pool1.CNhs13199.10252-104B97.98
Ileum epithelium, pool2.CNhs13232.10253-104C17.56
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G856.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H139.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H340.31
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G974.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H256.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H446.61
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.69
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.08
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.49
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A27.38
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C310.12
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C730.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E732.63
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D228.42
Mouse Microglia, donor1.CNhs12629.11718-123C811.98
Mouse Microglia, donor2.CNhs12634.11736-123E811.14
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.28
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.47
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D97.19
Mouse Schwann, donor2.CNhs12573.11746-123F93.93
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.46
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H916.05
adrenal gland, adult.CNhs10508.49-24D76.83
adrenal gland, embryo E14.CNhs11038.406-44C53.64
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C15.64
adrenal gland, neonate N25.CNhs11223.1377-27I32.64
amnion, adult pregnant day17.5.CNhs10488.583-22A87.17
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A47.64
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F15.78
cortex, adult.CNhs10473.12-14D57.65
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.35
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G46.10
eyeball, embryo E12.CNhs11016.345-16C65.07
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C95.04
eyeball, embryo E17.CNhs11023.1261-18D45.73
eyeball, neonate N00.CNhs11207.633-15C65.03
eyeball, neonate N01.CNhs11140.1532-43E74.36
eyeball, neonate N02.CNhs11205.1551-44G84.97
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H24.16
forelimb, embryo E13.CNhs10589.384-1E23.69
forelimb, embryo E14.CNhs10577.413-26A85.70
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B54.53
gonad, embryo E13.CNhs11044.1564-45I64.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C63.39
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G12.11
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D23.49
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G15.25
intestinal mucosa, adult.CNhs10506.860-29I39.58
intestine, adult.CNhs10496.178-9A36.88
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D85.54
intestine, embryo E16.CNhs10585.463-22H44.44
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E95.60
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F24.97
intestine, neonate N10.CNhs11098.755-23A56.04
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G15.18
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G74.14
kidney, neonate N10.CNhs11206.758-6D54.68
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F83.84
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D72.64
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G46.33
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H13.41
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B16.10
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C65.85
lung, neonate N06.CNhs11212.683-20E54.41
lung, neonate N07.CNhs11111.715-19A34.65
lung, neonate N10.CNhs11219.750-23E64.94
lung, neonate N20.CNhs11109.822-18A46.39
lung, neonate N25.CNhs11119.1359-25C75.35
lung, neonate N30.CNhs11133.1394-42H25.35
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A136.19
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A128.83
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.20
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.02
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I75.25
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G67.42
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E53.02
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C75.30
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B95.85
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I75.63
placenta, adult pregnant day17.CNhs10464.577-18G36.14
prostate, adult.CNhs10470.859-1F84.63
skin, adult.CNhs10492.30-1C37.42
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H33.50
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C43.78
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G28.03
spleen, embryo E16.CNhs11035.461-43C16.60
spleen, embryo E18.CNhs11011.1271-21F25.19
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H15.47
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.56
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E33.32
stomach, embryo E15.CNhs10603.1252-16G84.07
stomach, embryo E16.CNhs11022.459-17D44.43
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B83.24
stomach, neonate N07.CNhs11210.718-18A94.55
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I15.44
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C54.14
testis, embryo E16.CNhs11033.470-26G54.08
testis, embryo E17.CNhs11029.486-18I53.87
testis, embryo E18.CNhs11027.503-18G55.24
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I44.56
testis, neonate N10.CNhs11204.763-44D95.56
testis, neonate N20.CNhs11110.839-18H35.80
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B512.64
thymus, embryo E14.CNhs11041.402-44I44.66
thymus, embryo E15.CNhs11005.430-45I24.62
thymus, embryo E16.CNhs11002.456-26C53.90
thymus, embryo E17.CNhs10581.478-18C14.83
thymus, embryo E18.CNhs10595.1273-19G47.15
thymus, neonate N02.CNhs11181.1541-43F87.09
thymus, neonate N03.CNhs11137.2104-43C78.12
thymus, neonate N06.CNhs11197.681-26C47.17
thymus, neonate N07.CNhs11211.713-19D37.62
thymus, neonate N10.CNhs11194.748-24E47.36
thymus, neonate N20.CNhs11186.820-7A210.62
thymus, neonate N25.CNhs11125.1362-25G78.56
thymus, neonate N30.CNhs11132.1393-42G211.69
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.68
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.70
urinary bladder, adult.CNhs10481.879-12E45.99
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E55.68
vagina, adult.CNhs10502.89-27D54.29
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A58.31
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I83.53
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B44.17





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell6.82e-0870
CNS neuron (sensu Vertebrata)2.14e-0723
neuroblast (sensu Vertebrata)2.14e-0723
somatic stem cell2.18e-0791
multi fate stem cell2.18e-0791

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.25e-1048
immune system1.25e-1048
hematopoietic system1.10e-0945
blood island1.10e-0945
embryonic structure7.39e-09294
germ layer7.55e-09291
germ layer / neural crest7.55e-09291
embryonic tissue7.55e-09291
presumptive structure7.55e-09291
germ layer / neural crest derived structure7.55e-09291
epiblast (generic)7.55e-09291
thymus1.78e-0823
neck1.78e-0823
respiratory system epithelium1.78e-0823
hemolymphoid system gland1.78e-0823
pharyngeal epithelium1.78e-0823
thymic region1.78e-0823
pharyngeal gland1.78e-0823
entire pharyngeal arch endoderm1.78e-0823
thymus primordium1.78e-0823
early pharyngeal endoderm1.78e-0823
mixed endoderm/mesoderm-derived structure2.80e-0835
pharynx3.50e-0824
upper respiratory tract3.50e-0824
chordate pharynx3.50e-0824
pharyngeal arch system3.50e-0824
pharyngeal region of foregut3.50e-0824
gland of gut6.85e-0824
hemopoietic organ7.37e-0829
immune organ7.37e-0829
organ system subdivision1.88e-07194
segment of respiratory tract2.10e-0727
adult organism8.00e-0751







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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