FFCP PHASE1:Mm9::chr7:17200019..17200060,-: Difference between revisions
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|id=chr7:17200019..17200060,- | |id=chr7:17200019..17200060,- | ||
|ontology_enrichment_celltype=CL:0002321!1.15e-10!70;CL:0000220!1.15e-10!70;CL:0000117!1.29e-08!23;CL:0000337!1.29e-08!23;CL:0000055!3.08e-07!50;CL:0000540!3.09e-07!33;CL:0000047!3.09e-07!33;CL:0000031!3.09e-07!33;CL:0000404!3.09e-07!33;CL:0000221!3.89e-07!44;CL:0000133!3.89e-07!44;CL:0000393!5.26e-07!39;CL:0000211!5.26e-07!39;CL:0002319!7.56e-07!43 | |ontology_enrichment_celltype=CL:0002321!1.15e-10!70;CL:0000220!1.15e-10!70;CL:0000117!1.29e-08!23;CL:0000337!1.29e-08!23;CL:0000055!3.08e-07!50;CL:0000540!3.09e-07!33;CL:0000047!3.09e-07!33;CL:0000031!3.09e-07!33;CL:0000404!3.09e-07!33;CL:0000221!3.89e-07!44;CL:0000133!3.89e-07!44;CL:0000393!5.26e-07!39;CL:0000211!5.26e-07!39;CL:0002319!7.56e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.21e-10,70;CL:0000117,1.27e-08,23;CL:0000337,1.27e-08,23;CL:0000540,3.07e-07,33;CL:0000047,3.07e-07,33;CL:0000031,3.07e-07,33;CL:0000404,3.07e-07,33;CL:0000221,4.09e-07,44;CL:0000133,4.09e-07,44;CL:0000393,5.22e-07,39;CL:0000211,5.22e-07,39;CL:0002319,7.95e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!4.82e-16!122;UBERON:0000025!7.51e-15!114;UBERON:0000073!1.14e-09!75;UBERON:0001016!1.14e-09!75;UBERON:0004121!4.77e-09!102;UBERON:0000924!4.77e-09!102;UBERON:0006601!4.77e-09!102;UBERON:0001017!6.85e-09!73;UBERON:0005743!6.85e-09!73;UBERON:0002020!1.71e-08!34;UBERON:0001049!2.10e-08!52;UBERON:0005068!2.10e-08!52;UBERON:0006241!2.10e-08!52;UBERON:0007135!2.10e-08!52;UBERON:0000955!1.71e-07!50;UBERON:0006238!1.71e-07!50;UBERON:0002616!3.48e-07!49;UBERON:0000483!3.83e-07!181;UBERON:0000119!7.04e-07!183 | |ontology_enrichment_uberon=UBERON:0004111!4.82e-16!122;UBERON:0000025!7.51e-15!114;UBERON:0000073!1.14e-09!75;UBERON:0001016!1.14e-09!75;UBERON:0004121!4.77e-09!102;UBERON:0000924!4.77e-09!102;UBERON:0006601!4.77e-09!102;UBERON:0001017!6.85e-09!73;UBERON:0005743!6.85e-09!73;UBERON:0002020!1.71e-08!34;UBERON:0001049!2.10e-08!52;UBERON:0005068!2.10e-08!52;UBERON:0006241!2.10e-08!52;UBERON:0007135!2.10e-08!52;UBERON:0000955!1.71e-07!50;UBERON:0006238!1.71e-07!50;UBERON:0002616!3.48e-07!49;UBERON:0000483!3.83e-07!181;UBERON:0000119!7.04e-07!183 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,5.28e-16,122;UBERON:0000025,8.22e-15,114;UBERON:0001016,1.19e-09,75;UBERON:0004121,3.77e-09,95;UBERON:0000924,3.77e-09,95;UBERON:0006601,3.77e-09,95;UBERON:0001017,7.16e-09,73;UBERON:0000073,7.23e-09,54;UBERON:0010314,1.24e-08,92;UBERON:0002020,1.69e-08,34;UBERON:0001049,2.21e-08,52;UBERON:0005068,2.21e-08,52;UBERON:0006241,2.21e-08,52;UBERON:0007135,2.21e-08,52;UBERON:0010371,4.44e-07,73;UBERON:0000483,5.27e-07,174;UBERON:0000119,9.72e-07,176 | |||
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| ||
|short_description=p4@Grlf1 | |short_description=p4@Grlf1 | ||
}} | }} |
Revision as of 18:56, 13 November 2012
Short description: | p4@Grlf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Grlf1_5end |
Coexpression cluster: | NA |
Association with transcript: | 281bp_to_ENSMUST00000075845, NM_172739, uc009fhw.1_5end |
EntrezGene: | Grlf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.21e-10 | 70 |
CNS neuron (sensu Vertebrata) | 1.27e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.27e-08 | 23 |
neuron | 3.07e-07 | 33 |
neuronal stem cell | 3.07e-07 | 33 |
neuroblast | 3.07e-07 | 33 |
electrically signaling cell | 3.07e-07 | 33 |
ectodermal cell | 4.09e-07 | 44 |
neurectodermal cell | 4.09e-07 | 44 |
electrically responsive cell | 5.22e-07 | 39 |
electrically active cell | 5.22e-07 | 39 |
neural cell | 7.95e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 5.28e-16 | 122 |
tube | 8.22e-15 | 114 |
nervous system | 1.19e-09 | 75 |
ectoderm-derived structure | 3.77e-09 | 95 |
ectoderm | 3.77e-09 | 95 |
presumptive ectoderm | 3.77e-09 | 95 |
central nervous system | 7.16e-09 | 73 |
regional part of nervous system | 7.23e-09 | 54 |
structure with developmental contribution from neural crest | 1.24e-08 | 92 |
gray matter | 1.69e-08 | 34 |
neural tube | 2.21e-08 | 52 |
neural rod | 2.21e-08 | 52 |
future spinal cord | 2.21e-08 | 52 |
neural keel | 2.21e-08 | 52 |
ecto-epithelium | 4.44e-07 | 73 |
epithelium | 5.27e-07 | 174 |
cell layer | 9.72e-07 | 176 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.