FFCP PHASE1:Mm9::chr19:36424066..36424074,+: Difference between revisions
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|id=chr19:36424066..36424074,+ | |id=chr19:36424066..36424074,+ | ||
|ontology_enrichment_celltype=CL:0000838!2.76e-07!12;CL:0000791!2.80e-07!9;CL:0000789!2.80e-07!9;CL:0002420!2.80e-07!9;CL:0002419!2.80e-07!9;CL:0000790!2.80e-07!9;CL:0000084!8.14e-07!11;CL:0000827!8.14e-07!11 | |ontology_enrichment_celltype=CL:0000838!2.76e-07!12;CL:0000791!2.80e-07!9;CL:0000789!2.80e-07!9;CL:0002420!2.80e-07!9;CL:0002419!2.80e-07!9;CL:0000790!2.80e-07!9;CL:0000084!8.14e-07!11;CL:0000827!8.14e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.50e-09,9;CL:0000789,7.50e-09,9;CL:0002420,7.50e-09,9;CL:0002419,7.50e-09,9;CL:0000790,7.50e-09,9;CL:0000838,3.32e-08,12;CL:0000624,5.10e-08,8;CL:0000084,1.31e-07,11;CL:0000827,1.31e-07,11;CL:0000542,3.22e-07,13;CL:0000051,3.22e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!8.99e-09!24;UBERON:0001557!8.99e-09!24;UBERON:0001042!8.99e-09!24;UBERON:0008814!8.99e-09!24;UBERON:0009145!8.99e-09!24;UBERON:0002370!3.08e-08!23;UBERON:0000974!3.08e-08!23;UBERON:0004807!3.08e-08!23;UBERON:0005058!3.08e-08!23;UBERON:0003351!3.08e-08!23;UBERON:0009113!3.08e-08!23;UBERON:0003295!3.08e-08!23;UBERON:0009722!3.08e-08!23;UBERON:0005562!3.08e-08!23;UBERON:0007690!3.08e-08!23;UBERON:0003929!3.20e-08!55;UBERON:0000490!4.71e-08!66;UBERON:0003408!6.36e-08!24;UBERON:0003081!6.60e-08!88;UBERON:0005057!1.48e-07!51;UBERON:0005911!1.48e-07!69;UBERON:0000072!8.82e-07!27 | |ontology_enrichment_uberon=UBERON:0006562!8.99e-09!24;UBERON:0001557!8.99e-09!24;UBERON:0001042!8.99e-09!24;UBERON:0008814!8.99e-09!24;UBERON:0009145!8.99e-09!24;UBERON:0002370!3.08e-08!23;UBERON:0000974!3.08e-08!23;UBERON:0004807!3.08e-08!23;UBERON:0005058!3.08e-08!23;UBERON:0003351!3.08e-08!23;UBERON:0009113!3.08e-08!23;UBERON:0003295!3.08e-08!23;UBERON:0009722!3.08e-08!23;UBERON:0005562!3.08e-08!23;UBERON:0007690!3.08e-08!23;UBERON:0003929!3.20e-08!55;UBERON:0000490!4.71e-08!66;UBERON:0003408!6.36e-08!24;UBERON:0003081!6.60e-08!88;UBERON:0005057!1.48e-07!51;UBERON:0005911!1.48e-07!69;UBERON:0000072!8.82e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006562,2.10e-11,24;UBERON:0001557,2.10e-11,24;UBERON:0001042,2.10e-11,24;UBERON:0008814,2.10e-11,24;UBERON:0009145,2.10e-11,24;UBERON:0002370,1.03e-10,23;UBERON:0000974,1.03e-10,23;UBERON:0004807,1.03e-10,23;UBERON:0005058,1.03e-10,23;UBERON:0003351,1.03e-10,23;UBERON:0009113,1.03e-10,23;UBERON:0003295,1.03e-10,23;UBERON:0009722,1.03e-10,23;UBERON:0005562,1.03e-10,23;UBERON:0007690,1.03e-10,23;UBERON:0007811,5.79e-10,36;UBERON:0003408,6.47e-10,24;UBERON:0000072,3.67e-09,27;UBERON:0003081,3.92e-09,87;UBERON:0003929,3.18e-08,55;UBERON:0004177,3.88e-08,29;UBERON:0005057,3.88e-08,29;UBERON:0000490,5.33e-08,66;UBERON:0000077,7.95e-08,35;UBERON:0005911,1.15e-07,69;UBERON:0000065,1.83e-07,41;UBERON:0001004,4.65e-07,42;UBERON:0001048,9.07e-07,134 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,4.83942738090928,0,1.00727563147134,0.934450562382103,6.71441281896197,18.4433226018683,18.2570330531155,5.82141091966717,6.1424562426409,11.2992481754596,12.7633787531736,0.333109761815663,0.607425802169478,0,0.788655413395594,1.37114433605739,0.84877930359606,1.78590909317247,1.48936426801328,0.783599367416806,1.11994695955385,0.68822784320151,0,0.86152399231815,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,1.1554064790051,1.16364251750945,1.42918549383658,2.51118978442145,0.7813353445238,2.61761871986899,0,1.36609096991689,1.45653105909346,2.51793635951155,2.63580021170738,3.67093504323363,0,0.218025156380447,0.219686182734472,0,0,0,3.85899993932794,10.1550699881588,13.1076581665561,0.514518872071894,0.573066879877513,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.270011876663381,0,0,0,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.255374676170375,0.307213066512487,0.395658863190582,0,0,0,0.56276261003168,0.61119299110724,0.294628585473668,0.142371680799103,0,0.075726193333184,0.151143120213571,2.31891590961342,0.860423876981386,1.3599426674155,1.61910957491345,1.29955283489534,1.34408066129201,0.842666520790511,0.852151612890289,0.779358013808606,1.06001872353102,0.422530259330042,1.28326477414318,0,0,0,0.760079596425296,0,2.62622923353838,3.10725460376606,1.92974780784272,0.173485326766136,0,0,0.452167921657868,1.88141931417128,1.13099932196708,10.6293836125781,1.87979163995885,4.42305275974937,0,2.20841518460394,0.969750506270444,1.86391761218122,4.09893115816166,1.8850203613211,2.04365644166873,16.8939325553348,7.7987355029143,13.2153036155987,1.64769703345305,1.83000241127451,0.125654352112864,1.73824320192276,0.255715457330331,0.83115217823824,1.29793010454206,0.407357455401265,1.11966273549084,0.758168275301024,2.73574412652416,0.520481771850815,0.919608417733892,0.540186389416048,2.10986744970001,5.64702942956021,3.58718416797579,2.62364828767241,1.81092359517311,0,0.378212160335639,0.351902248327898,0,0,0.348252166522167,0.205782136407943,0.199034266818493,5.61770549850588,4.63226232806487,5.68326998791185,0.828503090142008,1.40715635988658,1.98068267607116,2.84093682702252,1.37734962223183,1.3884040159864,2.79040733700489,2.41446061259657,2.45207218971056,3.62031669809657,2.79084688934462,2.83740833410495,2.92399974850665,4.17145219052996,4.02619256281115,1.26173969138476,0.308713837137853,4.29544417878937,0.528901133327089,0,0.464473343720877,0.38660238396628,0.605050573870028,0.444756087689741,0.380451252225118,1.42358718463353,0.494096864172033,0.251335208800269,1.59165177632921,1.36474860983384,1.79763881730844,2.16138049874694,1.7922714592893,0,0,0,0.203651327845314,0.193952487167626,0.49095073923223,0.632365371242573,1.91893192373483,0.627994911365499,1.60416313098341,3.26097889795864,0,0.589676985339609,0.224862112384854,0.608580364165509,0.72353147925725,0,1.43848068725405,0.972811360650212,0.823684239564244,2.87536413054709,1.48856379067401,3.12037673114561,3.03094653536534,2.51156378930677,3.37710464954357,2.58654466233247,0,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,2.38043640886014,1.95133647857799,1.10344600874334,1.32878813789265,0.637819074629948,2.29408640602033,0.690739927463582,2.4590339958857,1.50791283939272,0.54390568381871,1.96705709207614,1.10374698521893,0.642202359951168,0.937693492737625,0,3.7870639080656,1.57754109708128,0.390438744296638,0.646270193198397,0,0.222798674082394,1.13230612315533,2.83367491172426,1.46127928955656,0.395287777946524,2.24924921495265,0.425820255624806,0.178065603667255,0,0.824850614862677,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0,0,0.727067458955011,0,2.21225730555071,2.10837217149998,0,4.42571487479924,0.18006109403131,0,0.214337035031592,0.354680467284547,0.713475270408282,0.822745103010605,0.608929898229199,0.938686832254841,4.44847348814022,0.882113592219848,2.80306630000516,0.807322133479528,0.180938774784468,0.119372344003136,0.656563598980245,2.04036585640896,0.556275906031529,1.53783792718067,0,0.740778109478847,1.13021074202815,0.410082683163076,0.686334519619568,22.0971958992012,22.9520381810799,16.1693969351176,1.90934123603023,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,1.34864346384821,0.661227645802687,0.26175594198403,1.03691978633434,0.621339313086926,0,0,0,0.388902376688095,0.258319646955462,0.675824501963113,0.821500670520278,0.2604087696879,1.04859344425711,1.20792060413003,0.576060012515731,4.10814456816632,0.608175645870493,1.54066435747241,2.20865399062252,2.8644271306797,3.17890167650024,3.72605893511903,4.57837534241189,5.55315474714812,4.80102881926499,3.93222122033678,3.8983152295901,5.67649865677944,5.61009130471531,4.98806843953465,0.887943813496259,0.179427713218951,1.34307693091263,2.12508553435409,0.750729901804728,0.73260649706906,0.428736758158132,2.00628841614145,0.56475184261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|phase1_expression=0,0.348975407639361,0.909998478779072,4.83942738090928,0,1.00727563147134,0.934450562382103,6.71441281896197,18.4433226018683,18.2570330531155,5.82141091966717,6.1424562426409,11.2992481754596,12.7633787531736,0.333109761815663,0.607425802169478,0,0.788655413395594,1.37114433605739,0.84877930359606,1.78590909317247,1.48936426801328,0.783599367416806,1.11994695955385,0.68822784320151,0,0.86152399231815,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,1.1554064790051,1.16364251750945,1.42918549383658,2.51118978442145,0.7813353445238,2.61761871986899,0,1.36609096991689,1.45653105909346,2.51793635951155,2.63580021170738,3.67093504323363,0,0.218025156380447,0.219686182734472,0,0,0,3.85899993932794,10.1550699881588,13.1076581665561,0.514518872071894,0.573066879877513,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.270011876663381,0,0,0,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.255374676170375,0.307213066512487,0.395658863190582,0,0,0,0.56276261003168,0.61119299110724,0.294628585473668,0.142371680799103,0,0.075726193333184,0.151143120213571,2.31891590961342,0.860423876981386,1.3599426674155,1.61910957491345,1.29955283489534,1.34408066129201,0.842666520790511,0.852151612890289,0.779358013808606,1.06001872353102,0.422530259330042,1.28326477414318,0,0,0,0.760079596425296,0,2.62622923353838,3.10725460376606,1.92974780784272,0.173485326766136,0,0,0.452167921657868,1.88141931417128,1.13099932196708,10.6293836125781,1.87979163995885,4.42305275974937,0,2.20841518460394,0.969750506270444,1.86391761218122,4.09893115816166,1.8850203613211,2.04365644166873,16.8939325553348,7.7987355029143,13.2153036155987,1.64769703345305,1.83000241127451,0.125654352112864,1.73824320192276,0.255715457330331,0.83115217823824,1.29793010454206,0.407357455401265,1.11966273549084,0.758168275301024,2.73574412652416,0.520481771850815,0.919608417733892,0.540186389416048,2.10986744970001,5.64702942956021,3.58718416797579,2.62364828767241,1.81092359517311,0,0.378212160335639,0.351902248327898,0,0,0.348252166522167,0.205782136407943,0.199034266818493,5.61770549850588,4.63226232806487,5.68326998791185,0.828503090142008,1.40715635988658,1.98068267607116,2.84093682702252,1.37734962223183,1.3884040159864,2.79040733700489,2.41446061259657,2.45207218971056,3.62031669809657,2.79084688934462,2.83740833410495,2.92399974850665,4.17145219052996,4.02619256281115,1.26173969138476,0.308713837137853,4.29544417878937,0.528901133327089,0,0.464473343720877,0.38660238396628,0.605050573870028,0.444756087689741,0.380451252225118,1.42358718463353,0.494096864172033,0.251335208800269,1.59165177632921,1.36474860983384,1.79763881730844,2.16138049874694,1.7922714592893,0,0,0,0.203651327845314,0.193952487167626,0.49095073923223,0.632365371242573,1.91893192373483,0.627994911365499,1.60416313098341,3.26097889795864,0,0.589676985339609,0.224862112384854,0.608580364165509,0.72353147925725,0,1.43848068725405,0.972811360650212,0.823684239564244,2.87536413054709,1.48856379067401,3.12037673114561,3.03094653536534,2.51156378930677,3.37710464954357,2.58654466233247,0,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,2.38043640886014,1.95133647857799,1.10344600874334,1.32878813789265,0.637819074629948,2.29408640602033,0.690739927463582,2.4590339958857,1.50791283939272,0.54390568381871,1.96705709207614,1.10374698521893,0.642202359951168,0.937693492737625,0,3.7870639080656,1.57754109708128,0.390438744296638,0.646270193198397,0,0.222798674082394,1.13230612315533,2.83367491172426,1.46127928955656,0.395287777946524,2.24924921495265,0.425820255624806,0.178065603667255,0,0.824850614862677,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0,0,0.727067458955011,0,2.21225730555071,2.10837217149998,0,4.42571487479924,0.18006109403131,0,0.214337035031592,0.354680467284547,0.713475270408282,0.822745103010605,0.608929898229199,0.938686832254841,4.44847348814022,0.882113592219848,2.80306630000516,0.807322133479528,0.180938774784468,0.119372344003136,0.656563598980245,2.04036585640896,0.556275906031529,1.53783792718067,0,0.740778109478847,1.13021074202815,0.410082683163076,0.686334519619568,22.0971958992012,22.9520381810799,16.1693969351176,1.90934123603023,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.436725127492355,1.34864346384821,0.661227645802687,0.26175594198403,1.03691978633434,0.621339313086926,0,0,0,0.388902376688095,0.258319646955462,0.675824501963113,0.821500670520278,0.2604087696879,1.04859344425711,1.20792060413003,0.576060012515731,4.10814456816632,0.608175645870493,1.54066435747241,2.20865399062252,2.8644271306797,3.17890167650024,3.72605893511903,4.57837534241189,5.55315474714812,4.80102881926499,3.93222122033678,3.8983152295901,5.67649865677944,5.61009130471531,4.98806843953465,0.887943813496259,0.179427713218951,1.34307693091263,2.12508553435409,0.750729901804728,0.73260649706906,0.428736758158132,2.00628841614145,0.56475184261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| ||
|short_description=p@chr19:36424066..36424074,+ | |short_description=p@chr19:36424066..36424074,+ | ||
}} | }} |
Revision as of 05:50, 14 November 2012
Short description: | p@chr19:36424066..36424074, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:36424066..36424074, + |
Coexpression cluster: | MCL_coexpression_mm9:374 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.50e-09 | 9 |
alpha-beta T cell | 7.50e-09 | 9 |
immature T cell | 7.50e-09 | 9 |
mature T cell | 7.50e-09 | 9 |
immature alpha-beta T cell | 7.50e-09 | 9 |
lymphoid lineage restricted progenitor cell | 3.32e-08 | 12 |
CD4-positive, alpha-beta T cell | 5.10e-08 | 8 |
T cell | 1.31e-07 | 11 |
pro-T cell | 1.31e-07 | 11 |
lymphocyte | 3.22e-07 | 13 |
common lymphoid progenitor | 3.22e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
pharynx | 2.10e-11 | 24 |
upper respiratory tract | 2.10e-11 | 24 |
chordate pharynx | 2.10e-11 | 24 |
pharyngeal arch system | 2.10e-11 | 24 |
pharyngeal region of foregut | 2.10e-11 | 24 |
thymus | 1.03e-10 | 23 |
neck | 1.03e-10 | 23 |
respiratory system epithelium | 1.03e-10 | 23 |
hemolymphoid system gland | 1.03e-10 | 23 |
pharyngeal epithelium | 1.03e-10 | 23 |
thymic region | 1.03e-10 | 23 |
pharyngeal gland | 1.03e-10 | 23 |
entire pharyngeal arch endoderm | 1.03e-10 | 23 |
thymus primordium | 1.03e-10 | 23 |
early pharyngeal endoderm | 1.03e-10 | 23 |
craniocervical region | 5.79e-10 | 36 |
gland of gut | 6.47e-10 | 24 |
segment of respiratory tract | 3.67e-09 | 27 |
lateral plate mesoderm | 3.92e-09 | 87 |
gut epithelium | 3.18e-08 | 55 |
hemopoietic organ | 3.88e-08 | 29 |
immune organ | 3.88e-08 | 29 |
unilaminar epithelium | 5.33e-08 | 66 |
mixed endoderm/mesoderm-derived structure | 7.95e-08 | 35 |
endo-epithelium | 1.15e-07 | 69 |
respiratory tract | 1.83e-07 | 41 |
respiratory system | 4.65e-07 | 42 |
primordium | 9.07e-07 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.