FFCP PHASE1:Mm9::chr19:6363213..6363230,-: Difference between revisions
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|id=chr19:6363213..6363230,- | |id=chr19:6363213..6363230,- | ||
|ontology_enrichment_celltype=CL:0000988!6.98e-21!32;CL:0002032!6.98e-21!32;CL:0000037!6.98e-21!32;CL:0000566!6.98e-21!32;CL:0000837!6.98e-21!32;CL:0002320!2.33e-19!46;CL:0000134!2.33e-19!46;CL:0000838!3.24e-19!12;CL:0000084!1.55e-17!11;CL:0000827!1.55e-17!11;CL:0000542!1.68e-17!13;CL:0000051!1.68e-17!13;CL:0000063!2.46e-16!66;CL:0002031!5.31e-16!25;CL:0000219!1.89e-15!54;CL:0000791!1.30e-14!9;CL:0000789!1.30e-14!9;CL:0002420!1.30e-14!9;CL:0002419!1.30e-14!9;CL:0000790!1.30e-14!9;CL:0000034!5.61e-14!97;CL:0000624!4.54e-13!8;CL:0000738!1.12e-12!17;CL:0002087!1.12e-12!17;CL:0000723!4.85e-12!91;CL:0000048!4.85e-12!91;CL:0000144!2.99e-10!121;CL:0000012!2.99e-10!121;CL:0000893!1.11e-09!6;CL:0002489!1.11e-09!6;CL:0000898!1.11e-09!6;CL:0000809!1.11e-09!6;CL:0000810!1.11e-09!6;CL:0000895!1.11e-09!6;CL:0000808!1.11e-09!6;CL:0000894!1.11e-09!6;CL:0000806!1.11e-09!6;CL:0000807!1.11e-09!6;CL:0000805!1.11e-09!6;CL:0002425!1.11e-09!6;CL:0002436!1.11e-09!6;CL:0002427!1.11e-09!6;CL:0002428!1.11e-09!6;CL:0002429!1.11e-09!6;CL:0002433!1.11e-09!6;CL:0002431!1.11e-09!6;CL:0002432!1.11e-09!6;CL:0002371!3.60e-08!118;CL:0000049!7.10e-07!19 | |ontology_enrichment_celltype=CL:0000988!6.98e-21!32;CL:0002032!6.98e-21!32;CL:0000037!6.98e-21!32;CL:0000566!6.98e-21!32;CL:0000837!6.98e-21!32;CL:0002320!2.33e-19!46;CL:0000134!2.33e-19!46;CL:0000838!3.24e-19!12;CL:0000084!1.55e-17!11;CL:0000827!1.55e-17!11;CL:0000542!1.68e-17!13;CL:0000051!1.68e-17!13;CL:0000063!2.46e-16!66;CL:0002031!5.31e-16!25;CL:0000219!1.89e-15!54;CL:0000791!1.30e-14!9;CL:0000789!1.30e-14!9;CL:0002420!1.30e-14!9;CL:0002419!1.30e-14!9;CL:0000790!1.30e-14!9;CL:0000034!5.61e-14!97;CL:0000624!4.54e-13!8;CL:0000738!1.12e-12!17;CL:0002087!1.12e-12!17;CL:0000723!4.85e-12!91;CL:0000048!4.85e-12!91;CL:0000144!2.99e-10!121;CL:0000012!2.99e-10!121;CL:0000893!1.11e-09!6;CL:0002489!1.11e-09!6;CL:0000898!1.11e-09!6;CL:0000809!1.11e-09!6;CL:0000810!1.11e-09!6;CL:0000895!1.11e-09!6;CL:0000808!1.11e-09!6;CL:0000894!1.11e-09!6;CL:0000806!1.11e-09!6;CL:0000807!1.11e-09!6;CL:0000805!1.11e-09!6;CL:0002425!1.11e-09!6;CL:0002436!1.11e-09!6;CL:0002427!1.11e-09!6;CL:0002428!1.11e-09!6;CL:0002429!1.11e-09!6;CL:0002433!1.11e-09!6;CL:0002431!1.11e-09!6;CL:0002432!1.11e-09!6;CL:0002371!3.60e-08!118;CL:0000049!7.10e-07!19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.21e-13,12;CL:0000791,2.18e-12,9;CL:0000789,2.18e-12,9;CL:0002420,2.18e-12,9;CL:0002419,2.18e-12,9;CL:0000790,2.18e-12,9;CL:0000542,5.65e-12,13;CL:0000051,5.65e-12,13;CL:0000084,4.17e-10,11;CL:0000827,4.17e-10,11;CL:0000624,2.02e-09,8;CL:0000738,4.79e-09,17;CL:0002087,4.79e-09,17;CL:0002320,4.02e-08,46;CL:0000134,4.02e-08,46;CL:0000034,6.97e-08,97;CL:0000988,8.68e-08,32;CL:0002032,8.68e-08,32;CL:0000037,8.68e-08,32;CL:0000837,8.68e-08,32;CL:0000723,2.55e-07,91;CL:0000048,2.55e-07,91 | |||
|ontology_enrichment_disease=DOID:0060100!6.75e-07!3;DOID:4045!6.75e-07!3 | |ontology_enrichment_disease=DOID:0060100!6.75e-07!3;DOID:4045!6.75e-07!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.60e-14,3;DOID:4045,1.60e-14,3;DOID:0050686,1.69e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.33e-19!46;UBERON:0000490!3.02e-08!66;UBERON:0002405!1.03e-07!70;UBERON:0003929!1.82e-07!55;UBERON:0009854!5.73e-07!23;UBERON:0009856!5.73e-07!23 | |ontology_enrichment_uberon=UBERON:0002384!2.33e-19!46;UBERON:0000490!3.02e-08!66;UBERON:0002405!1.03e-07!70;UBERON:0003929!1.82e-07!55;UBERON:0009854!5.73e-07!23;UBERON:0009856!5.73e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.02e-08,46 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,2.7115897922731,0.422366166455,0.234064526321993,0.171217968225505,0.0797721589953364,7.01922992717943,4.63328132820686,0,0,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,0,0.595745707205312,0.783599367416806,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,1.73310971850765,0.166234645358492,0.612508068787107,8.78916424547506,2.3440060335714,4.18818995179039,85.2935657644971,10.2456822743767,5.34061388334269,0,0,0,0,0,0,0,0,0,2.01339127269284,2.17608642603403,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89864488701678,2.58127163094416,0,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,0,1.1981512450592,1.19980546198682,0.508280908292259,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,1.43768206527355,0,0,0,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.679913719975421,1.6794174278839,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0,0,0,0,0,2.7115897922731,0.422366166455,0.234064526321993,0.171217968225505,0.0797721589953364,7.01922992717943,4.63328132820686,0,0,0.699561878128147,0.157731082679119,0.137114433605739,0.42438965179803,0,0.595745707205312,0.783599367416806,0,0.22940928106717,0,0,0,0,0,0,0.635030673459631,0,0,1.73310971850765,0.166234645358492,0.612508068787107,8.78916424547506,2.3440060335714,4.18818995179039,85.2935657644971,10.2456822743767,5.34061388334269,0,0,0,0,0,0,0,0,0,2.01339127269284,2.17608642603403,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89864488701678,2.58127163094416,0,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,0,1.1981512450592,1.19980546198682,0.508280908292259,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0.274561413188081,1.43768206527355,0,0,0,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.679913719975421,1.6794174278839,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:6363213..6363230,- | |short_description=p@chr19:6363213..6363230,- | ||
}} | }} |
Revision as of 07:20, 14 November 2012
Short description: | p@chr19:6363213..6363230, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:6363213..6363230, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.21e-13 | 12 |
mature alpha-beta T cell | 2.18e-12 | 9 |
alpha-beta T cell | 2.18e-12 | 9 |
immature T cell | 2.18e-12 | 9 |
mature T cell | 2.18e-12 | 9 |
immature alpha-beta T cell | 2.18e-12 | 9 |
lymphocyte | 5.65e-12 | 13 |
common lymphoid progenitor | 5.65e-12 | 13 |
T cell | 4.17e-10 | 11 |
pro-T cell | 4.17e-10 | 11 |
CD4-positive, alpha-beta T cell | 2.02e-09 | 8 |
leukocyte | 4.79e-09 | 17 |
nongranular leukocyte | 4.79e-09 | 17 |
connective tissue cell | 4.02e-08 | 46 |
mesenchymal cell | 4.02e-08 | 46 |
stem cell | 6.97e-08 | 97 |
hematopoietic cell | 8.68e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.68e-08 | 32 |
hematopoietic stem cell | 8.68e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.68e-08 | 32 |
somatic stem cell | 2.55e-07 | 91 |
multi fate stem cell | 2.55e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.02e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.60e-14 | 3 |
muscle cancer | 1.60e-14 | 3 |
organ system cancer | 1.69e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.