FFCP PHASE1:Mm9::chr7:54175408..54175422,+: Difference between revisions
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|id=chr7:54175408..54175422,+ | |id=chr7:54175408..54175422,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.76e-08,6;CL:0000677,2.76e-08,6;CL:0000584,2.76e-08,6;CL:0000075,3.60e-07,7;CL:0000213,9.48e-07,1;CL:0002078,9.48e-07,1;CL:0000115,9.48e-07,1;CL:0002262,9.48e-07,1;CL:1000398,9.48e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.51e-17,3;DOID:4045,4.51e-17,3;DOID:0050686,8.47e-09,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,9.48e-07,1;UBERON:0001281,9.48e-07,1;UBERON:0000353,9.48e-07,1;UBERON:0003497,9.48e-07,1;UBERON:0003909,9.48e-07,1;UBERON:0003928,9.48e-07,1;UBERON:0003835,9.48e-07,1;UBERON:0003513,9.48e-07,1;UBERON:0001280,9.48e-07,1;UBERON:0004647,9.48e-07,1;UBERON:0002294,9.48e-07,1;UBERON:0001173,9.48e-07,1;UBERON:0004912,9.48e-07,1;UBERON:0005171,9.48e-07,1 | |||
|phase1_expression=0.160148847104794,1.39590163055744,0,1.20985684522732,1.50268718983904,0,0.233612640595526,0.387369970324729,0.422366166455,1.17032263160997,0.513653904676515,0.478632953972018,0,0.34968160967599,0.333109761815663,0,0,0.315462165358238,0,0,0,0,0,0.159992422793407,0,0,0,0.430942465371778,0,0.252030129759931,0,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,4.60384793810598,6.2506827561904,2.61761871986899,13.5293242247133,6.83045484958446,2.42755176515577,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,2.51673909086605,0.725362142011344,1.34437519656986,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0.182975287204819,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0.075726193333184,0.0755715601067855,3.47837386442013,0.860423876981386,0,0,0,0.448026887097336,0,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0.253359865475099,0,0,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0,0.718890747035522,0.599902730993408,0,0.449371918214468,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0.101839363850316,0,0.252722758433675,0.210441855886474,0,0,0,0,0.204109497453984,0.12811372028485,0,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0,0,0.59710280045548,0,1.02939162845886,0.852490498186778,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0.35163505977661,0,0,0,0,0.430846795465598,0.238968797952552,0.445597348164788,0,0.404810701674894,0.292255857911312,0,0.642642632843614,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,1.18984900995699,0.979660166265606,0.829199842826543,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0,0,0.2604087696879,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.194915761479505,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.499621155875892,0,0,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,1.39590163055744,0,1.20985684522732,1.50268718983904,0,0.233612640595526,0.387369970324729,0.422366166455,1.17032263160997,0.513653904676515,0.478632953972018,0,0.34968160967599,0.333109761815663,0,0,0.315462165358238,0,0,0,0,0,0.159992422793407,0,0,0,0.430942465371778,0,0.252030129759931,0,0,0,0,0.288851619751275,0.332469290716985,0.612508068787107,4.60384793810598,6.2506827561904,2.61761871986899,13.5293242247133,6.83045484958446,2.42755176515577,0,0.101376931219515,0,0,0,0,0,0.139986421625363,0,2.51673909086605,0.725362142011344,1.34437519656986,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.255374676170375,0,0,0.182975287204819,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0.075726193333184,0.0755715601067855,3.47837386442013,0.860423876981386,0,0,0,0.448026887097336,0,0,0,0,0.14084341977668,0,0,0,0.432982082022428,0.253359865475099,0,0,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0.220841518460394,0.484875253135222,0,0,0.209446706813455,0,0.718890747035522,0.599902730993408,0,0.449371918214468,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0.101839363850316,0,0.252722758433675,0.210441855886474,0,0,0,0,0.204109497453984,0.12811372028485,0,0.258703370739016,0.215567992932842,0,0.175951124163949,0,0,0,0,0.59710280045548,0,1.02939162845886,0.852490498186778,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0.213288250535234,0.464473343720877,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0.35163505977661,0,0,0,0,0.430846795465598,0.238968797952552,0.445597348164788,0,0.404810701674894,0.292255857911312,0,0.642642632843614,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0,0,0,0,0,1.18984900995699,0.979660166265606,0.829199842826543,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0,0,0.2604087696879,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0.194915761479505,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.499621155875892,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr7:54175408..54175422,+ | |short_description=p@chr7:54175408..54175422,+ | ||
}} | }} |
Revision as of 09:11, 14 November 2012
Short description: | p@chr7:54175408..54175422, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:54175408..54175422, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.76e-08 | 6 |
gut absorptive cell | 2.76e-08 | 6 |
enterocyte | 2.76e-08 | 6 |
columnar/cuboidal epithelial cell | 3.60e-07 | 7 |
lining cell | 9.48e-07 | 1 |
meso-epithelial cell | 9.48e-07 | 1 |
endothelial cell | 9.48e-07 | 1 |
endothelial cell of sinusoid | 9.48e-07 | 1 |
endothelial cell of hepatic sinusoid | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 9.48e-07 | 1 |
hepatic sinusoid | 9.48e-07 | 1 |
parenchyma | 9.48e-07 | 1 |
abdomen blood vessel | 9.48e-07 | 1 |
sinusoid | 9.48e-07 | 1 |
digestive system duct | 9.48e-07 | 1 |
abdominal segment blood vessel | 9.48e-07 | 1 |
trunk blood vessel | 9.48e-07 | 1 |
liver parenchyma | 9.48e-07 | 1 |
liver lobule | 9.48e-07 | 1 |
biliary system | 9.48e-07 | 1 |
biliary tree | 9.48e-07 | 1 |
biliary bud | 9.48e-07 | 1 |
hepatic duct | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.51e-17 | 3 |
muscle cancer | 4.51e-17 | 3 |
organ system cancer | 8.47e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.