FFCP PHASE1:Mm9::chr9:58049833..58049858,-: Difference between revisions
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|id=chr9:58049833..58049858,- | |id=chr9:58049833..58049858,- | ||
|ontology_enrichment_celltype=CL:0000117!5.84e-10!23;CL:0000337!5.84e-10!23;CL:0002609!2.70e-07!6 | |ontology_enrichment_celltype=CL:0000117!5.84e-10!23;CL:0000337!5.84e-10!23;CL:0002609!2.70e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.96e-10,6;CL:0000117,4.21e-08,23;CL:0000337,4.21e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!5.78e-14!49;UBERON:0000033!1.32e-11!63;UBERON:0002780!3.88e-11!39;UBERON:0001890!3.88e-11!39;UBERON:0006240!3.88e-11!39;UBERON:0002346!4.36e-11!71;UBERON:0003075!4.36e-11!71;UBERON:0007284!4.36e-11!71;UBERON:0003080!1.31e-10!40;UBERON:0001049!1.06e-09!52;UBERON:0005068!1.06e-09!52;UBERON:0006241!1.06e-09!52;UBERON:0007135!1.06e-09!52;UBERON:0000955!1.86e-09!50;UBERON:0006238!1.86e-09!50;UBERON:0002616!3.55e-09!49;UBERON:0001017!6.99e-09!73;UBERON:0005743!6.99e-09!73;UBERON:0004121!2.21e-08!102;UBERON:0000924!2.21e-08!102;UBERON:0006601!2.21e-08!102;UBERON:0000073!2.63e-08!75;UBERON:0001016!2.63e-08!75;UBERON:0002020!3.22e-08!34;UBERON:0002791!2.11e-07!29;UBERON:0003528!2.11e-07!29;UBERON:0001893!2.11e-07!29 | |ontology_enrichment_uberon=UBERON:0003056!5.78e-14!49;UBERON:0000033!1.32e-11!63;UBERON:0002780!3.88e-11!39;UBERON:0001890!3.88e-11!39;UBERON:0006240!3.88e-11!39;UBERON:0002346!4.36e-11!71;UBERON:0003075!4.36e-11!71;UBERON:0007284!4.36e-11!71;UBERON:0003080!1.31e-10!40;UBERON:0001049!1.06e-09!52;UBERON:0005068!1.06e-09!52;UBERON:0006241!1.06e-09!52;UBERON:0007135!1.06e-09!52;UBERON:0000955!1.86e-09!50;UBERON:0006238!1.86e-09!50;UBERON:0002616!3.55e-09!49;UBERON:0001017!6.99e-09!73;UBERON:0005743!6.99e-09!73;UBERON:0004121!2.21e-08!102;UBERON:0000924!2.21e-08!102;UBERON:0006601!2.21e-08!102;UBERON:0000073!2.63e-08!75;UBERON:0001016!2.63e-08!75;UBERON:0002020!3.22e-08!34;UBERON:0002791!2.11e-07!29;UBERON:0003528!2.11e-07!29;UBERON:0001893!2.11e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.84e-14,49;UBERON:0002780,1.27e-10,39;UBERON:0001890,1.27e-10,39;UBERON:0006240,1.27e-10,39;UBERON:0003080,3.26e-10,40;UBERON:0002346,3.72e-09,64;UBERON:0003075,3.72e-09,64;UBERON:0007284,3.72e-09,64;UBERON:0003528,9.02e-09,29;UBERON:0002791,9.02e-09,29;UBERON:0001893,9.02e-09,29;UBERON:0002616,3.80e-08,46;UBERON:0000955,7.40e-08,47;UBERON:0006238,7.40e-08,47;UBERON:0010371,3.70e-07,73;UBERON:0002020,7.10e-07,34;UBERON:0000956,9.37e-07,21;UBERON:0001869,9.37e-07,21;UBERON:0000203,9.37e-07,21 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,18.613114399083,17.4567023159771,12.0427966666174,0,0,0,0,0,0,0.384218305321555,15.5534418462716,19.9808788730902,16.8259969081106,0.285650984403804,0.220868540951614,26.8254850280749,30.0954778997262,22.0612508786405,0,0.127687338085188,0.153606533256243,9.23204014111357,9.97215315266265,9.37644067002168,0,0,0.15279824777681,0.883885756421003,0,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.301445281105245,0.587943535678524,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,14.0732874366408,0.695297280769106,1.79000820131231,0.62336413367868,0.324482526135515,0,0.124406970610093,0,0,0.650602214813519,3.90833577536904,6.66229880279792,2.26057226753573,4.08218994907967,3.20284300712124,2.06143794031403,0,0.215567992932842,2.26927296201383,0.879755620819744,1.97276159184817,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0,0.420579897128254,31.7975252251989,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0.398282546508734,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,3.96134406868882,3.36332577835162,3.21505552547388,1.95074257006501,1.07021290561242,0.822745103010605,0.304464949114599,0.704015124191131,0,0.220528398054962,0.16488625294148,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0,0,0,0,0,0,0,1.49516546043979,1.48912641411388,3.69457257853691,3.87479470433193,3.54807863530634,8.56707842114004,4.55715346953825,0.419437377702843,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,1.6942555278512,2.30162618253588,1.71868654031819,0.859265911718438,1.37016503954128,0,0,0,0,0,0.31136204275253,1.19707462020309,1.70733605754134,2.91728060481953,0.838452650511929,0.551530525350042,1.33348036680969,3.29656091582231,1.28367683836726,1.51618327058278,1.52087579934144,1.32038438970253,1.49826411951812,1.79270426733634,0.976402972245426,3.81034953026459,1.50649623728312,1.35036454324594,0.824171801606613,2.20798380201596,1.37147700954166,0.70990322463735,2.38436189947321,1.16277133305863,1.59985946706062,1.52306294205018,1.46342378298218,1.8414879800649,1.49384525230448,1.12228454331548,0.711810108745045,1.37906275325789,1.63692417267876,0.619747364743864,1.15743966588685,5.74564329257276,1.40358965067245,1.07435527024149,0.57386499620653,0.220591419119515,0 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| ||
|short_description=p5@Islr2 | |short_description=p5@Islr2 | ||
}} | }} |
Revision as of 14:33, 14 November 2012
Short description: | p5@Islr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Islr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -227bp_to_ENSMUST00000165276, NM_001161540, uc012gug.1_5end |
EntrezGene: | Islr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.96e-10 | 6 |
CNS neuron (sensu Vertebrata) | 4.21e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.21e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 2.84e-14 | 49 |
regional part of forebrain | 1.27e-10 | 39 |
forebrain | 1.27e-10 | 39 |
future forebrain | 1.27e-10 | 39 |
anterior neural tube | 3.26e-10 | 40 |
neurectoderm | 3.72e-09 | 64 |
neural plate | 3.72e-09 | 64 |
presumptive neural plate | 3.72e-09 | 64 |
brain grey matter | 9.02e-09 | 29 |
regional part of telencephalon | 9.02e-09 | 29 |
telencephalon | 9.02e-09 | 29 |
regional part of brain | 3.80e-08 | 46 |
brain | 7.40e-08 | 47 |
future brain | 7.40e-08 | 47 |
ecto-epithelium | 3.70e-07 | 73 |
gray matter | 7.10e-07 | 34 |
cerebral cortex | 9.37e-07 | 21 |
cerebral hemisphere | 9.37e-07 | 21 |
pallium | 9.37e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.