FFCP PHASE1:Mm9::chr12:79582304..79582310,+: Difference between revisions
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|id=chr12:79582304..79582310,+ | |id=chr12:79582304..79582310,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.48e-18,23;CL:0000337,2.48e-18,23;CL:0000540,1.83e-12,33;CL:0000047,1.83e-12,33;CL:0000031,1.83e-12,33;CL:0000404,1.83e-12,33;CL:0002611,6.40e-12,2;CL:0000393,2.22e-10,39;CL:0000211,2.22e-10,39;CL:0002319,2.60e-09,43;CL:0000221,4.48e-09,44;CL:0000133,4.48e-09,44;CL:0002612,1.84e-08,3;CL:0002610,2.58e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,4.72e-18,5;UBERON:0002315,4.72e-18,5;UBERON:0002240,4.31e-15,6;UBERON:0005174,4.31e-15,6;UBERON:0001137,4.31e-15,6;UBERON:0000073,3.28e-13,54;UBERON:0002020,4.58e-12,34;UBERON:0002256,6.40e-12,2;UBERON:0003076,1.25e-11,12;UBERON:0003057,1.25e-11,12;UBERON:0001049,2.17e-09,52;UBERON:0005068,2.17e-09,52;UBERON:0006241,2.17e-09,52;UBERON:0007135,2.17e-09,52;UBERON:0001017,2.38e-09,73;UBERON:0001016,4.67e-09,75;UBERON:0002257,1.84e-08,3;UBERON:0004684,2.58e-08,3;UBERON:0002275,2.58e-08,3;UBERON:0002346,2.21e-07,64;UBERON:0003075,2.21e-07,64;UBERON:0007284,2.21e-07,64;UBERON:0004121,8.56e-07,95;UBERON:0000924,8.56e-07,95;UBERON:0006601,8.56e-07,95 | |||
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| ||
|short_description=p@chr12:79582304..79582310,+ | |short_description=p@chr12:79582304..79582310,+ | ||
}} | }} |
Revision as of 15:23, 14 November 2012
Short description: | p@chr12:79582304..79582310, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:79582304..79582310, + |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.48e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.48e-18 | 23 |
neuron | 1.83e-12 | 33 |
neuronal stem cell | 1.83e-12 | 33 |
neuroblast | 1.83e-12 | 33 |
electrically signaling cell | 1.83e-12 | 33 |
neuron of the dorsal spinal cord | 6.40e-12 | 2 |
electrically responsive cell | 2.22e-10 | 39 |
electrically active cell | 2.22e-10 | 39 |
neural cell | 2.60e-09 | 43 |
ectodermal cell | 4.48e-09 | 44 |
neurectodermal cell | 4.48e-09 | 44 |
neuron of the ventral spinal cord | 1.84e-08 | 3 |
raphe nuclei neuron | 2.58e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 4.72e-18 | 5 |
gray matter of spinal cord | 4.72e-18 | 5 |
spinal cord | 4.31e-15 | 6 |
dorsal region element | 4.31e-15 | 6 |
dorsum | 4.31e-15 | 6 |
regional part of nervous system | 3.28e-13 | 54 |
gray matter | 4.58e-12 | 34 |
dorsal horn of spinal cord | 6.40e-12 | 2 |
posterior neural tube | 1.25e-11 | 12 |
chordal neural plate | 1.25e-11 | 12 |
neural tube | 2.17e-09 | 52 |
neural rod | 2.17e-09 | 52 |
future spinal cord | 2.17e-09 | 52 |
neural keel | 2.17e-09 | 52 |
central nervous system | 2.38e-09 | 73 |
nervous system | 4.67e-09 | 75 |
ventral horn of spinal cord | 1.84e-08 | 3 |
raphe nuclei | 2.58e-08 | 3 |
reticular formation | 2.58e-08 | 3 |
neurectoderm | 2.21e-07 | 64 |
neural plate | 2.21e-07 | 64 |
presumptive neural plate | 2.21e-07 | 64 |
ectoderm-derived structure | 8.56e-07 | 95 |
ectoderm | 8.56e-07 | 95 |
presumptive ectoderm | 8.56e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.