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FFCP PHASE1:Mm9::chr4:137772539..137772565,+: Difference between revisions

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|id=chr4:137772539..137772565,+
|id=chr4:137772539..137772565,+
|ontology_enrichment_celltype=CL:0000540!6.92e-11!33;CL:0000047!6.92e-11!33;CL:0000031!6.92e-11!33;CL:0000404!6.92e-11!33;CL:0000117!6.54e-09!23;CL:0000337!6.54e-09!23;CL:0000393!1.12e-07!39;CL:0000211!1.12e-07!39
|ontology_enrichment_celltype=CL:0000540!6.92e-11!33;CL:0000047!6.92e-11!33;CL:0000031!6.92e-11!33;CL:0000404!6.92e-11!33;CL:0000117!6.54e-09!23;CL:0000337!6.54e-09!23;CL:0000393!1.12e-07!39;CL:0000211!1.12e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000540,6.92e-11,33;CL:0000047,6.92e-11,33;CL:0000031,6.92e-11,33;CL:0000404,6.92e-11,33;CL:0000117,6.54e-09,23;CL:0000337,6.54e-09,23;CL:0000393,1.12e-07,39;CL:0000211,1.12e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!5.84e-17!102;UBERON:0000924!5.84e-17!102;UBERON:0006601!5.84e-17!102;UBERON:0002346!1.47e-15!71;UBERON:0003075!1.47e-15!71;UBERON:0007284!1.47e-15!71;UBERON:0000033!6.51e-15!63;UBERON:0003056!5.76e-14!49;UBERON:0001017!6.80e-14!73;UBERON:0005743!6.80e-14!73;UBERON:0000073!1.62e-13!75;UBERON:0001016!1.62e-13!75;UBERON:0000955!9.62e-12!50;UBERON:0006238!9.62e-12!50;UBERON:0002616!2.70e-11!49;UBERON:0001049!4.16e-11!52;UBERON:0005068!4.16e-11!52;UBERON:0006241!4.16e-11!52;UBERON:0007135!4.16e-11!52;UBERON:0003080!7.21e-11!40;UBERON:0000153!2.09e-10!94;UBERON:0002780!2.14e-10!39;UBERON:0001890!2.14e-10!39;UBERON:0006240!2.14e-10!39;UBERON:0007811!3.85e-09!86;UBERON:0002791!3.43e-08!29;UBERON:0003528!3.43e-08!29;UBERON:0001893!3.43e-08!29;UBERON:0002020!4.65e-08!34
|ontology_enrichment_uberon=UBERON:0004121!5.84e-17!102;UBERON:0000924!5.84e-17!102;UBERON:0006601!5.84e-17!102;UBERON:0002346!1.47e-15!71;UBERON:0003075!1.47e-15!71;UBERON:0007284!1.47e-15!71;UBERON:0000033!6.51e-15!63;UBERON:0003056!5.76e-14!49;UBERON:0001017!6.80e-14!73;UBERON:0005743!6.80e-14!73;UBERON:0000073!1.62e-13!75;UBERON:0001016!1.62e-13!75;UBERON:0000955!9.62e-12!50;UBERON:0006238!9.62e-12!50;UBERON:0002616!2.70e-11!49;UBERON:0001049!4.16e-11!52;UBERON:0005068!4.16e-11!52;UBERON:0006241!4.16e-11!52;UBERON:0007135!4.16e-11!52;UBERON:0003080!7.21e-11!40;UBERON:0000153!2.09e-10!94;UBERON:0002780!2.14e-10!39;UBERON:0001890!2.14e-10!39;UBERON:0006240!2.14e-10!39;UBERON:0007811!3.85e-09!86;UBERON:0002791!3.43e-08!29;UBERON:0003528!3.43e-08!29;UBERON:0001893!3.43e-08!29;UBERON:0002020!4.65e-08!34
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.45e-16,95;UBERON:0000924,5.45e-16,95;UBERON:0006601,5.45e-16,95;UBERON:0002346,7.80e-15,64;UBERON:0003075,7.80e-15,64;UBERON:0007284,7.80e-15,64;UBERON:0010371,4.17e-14,73;UBERON:0003056,5.76e-14,49;UBERON:0001017,6.80e-14,73;UBERON:0010314,1.15e-13,92;UBERON:0001016,1.62e-13,75;UBERON:0000073,2.73e-11,54;UBERON:0000955,3.52e-11,47;UBERON:0006238,3.52e-11,47;UBERON:0001049,4.16e-11,52;UBERON:0005068,4.16e-11,52;UBERON:0006241,4.16e-11,52;UBERON:0007135,4.16e-11,52;UBERON:0003080,7.21e-11,40;UBERON:0002616,9.80e-11,46;UBERON:0002780,2.14e-10,39;UBERON:0001890,2.14e-10,39;UBERON:0006240,2.14e-10,39;UBERON:0003528,3.43e-08,29;UBERON:0002791,3.43e-08,29;UBERON:0001893,3.43e-08,29;UBERON:0002020,4.65e-08,34
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4118,64.2631777889717,65.0264600604998,58.957892211468,58.2613976382425,82.3228419024346,51.8276765128379,62.8632620465195,78.9100927620396,13.5286305284206,88.6633118040794,76.6072810816362,93.3365704051429,79.8207709092378,72.9890462120162,122.16888543023,95.0492009360836,69.7314640430977,36.7207863655529,26.7867905819815,81.2148580014418,60.2093889411788,61.4211523845667,47.9407836788064,54.0660620915794,53.0479217265977,61.780461053264,59.37118992418,62.0943667181108,82.9130056406398,66.0411512646305,72.7035790318553,66.001323365266,82.7488467445508,58.949899739955,7.76950836809226,3.6782681209885,11.4161539127573,84.0374734040028,59.870709668927,64.6525233663446,70.5271967170127,60.1886524842436,68.8997247992821,60.3026059824402,73.3306257202428,63.5856774671644,78.7844897736239,83.093328712867,80.3276775275849,82.4087801900323,87.4564849339515,74.0397245805103,84.8980503238565,101.751342717263,67.9519750901454,61.992212852415,74.2030595703057,73.9050903969057,61.1178501454442,58.513956255846,57.7654577265267,57.6149642821458,64.6372214720111,61.4921872918608,51.5964706159052,60.6318193274112,57.033420672924,60.9655924842334,67.7923306777405,65.2033165167323,56.0436825092497,60.6459550953717,61.3735961769894,52.8877902354826,58.8937389169883,56.1037168200788,62.5827379761949,62.6994244477323,56.1588876719412,57.0861273820119,63.5563252798633,51.6250889925119,62.0461144789431,62.057823896605,65.0677358639806,53.1433365267863,66.1669675665315,71.1960147123146,58.2489705029067,76.2792241871459,80.1498111368454,67.9421570888108,59.8219015900687
|phase1_expression=81.9962097176545,31.0588112799031,35.9449399117733,52.3263085560816,41.5743455855468,33.7437336542898,32.004931761587,53.327932581371,18.7249000461717,18.9592266320815,6.33506482434368,2.39316476986009,54.2706313881922,38.4649770643589,30.3129883252253,33.8133696541009,53.1667027377391,42.429661240683,46.3446785587397,39.8926272690148,45.4131169406713,80.2270885703153,85.4123310484319,37.5982193564506,25.9232487605902,31.0085260622111,38.7685796543167,33.6135122989987,45.6056206695297,59.2270804935837,26.8293917892919,5.08024538767705,4.92051830067656,0,42.4611881034374,36.9040912695853,42.058887390048,93.3325536543304,60.9441568728564,72.2462766683842,81.764176836311,98.3585498340162,79.138187544078,60.0527821743504,54.9462967209769,42.9499400058335,32.8604364626176,40.552679086763,55.3609180490869,48.8019046676451,52.6348945311363,48.8758718840903,32.8853907873163,54.4021606508508,65.8743846319229,41.4187692017875,59.5989555072614,50.0201929509119,142.026155523438,140.182609507089,115.357315438125,38.6282766558811,40.0182658250013,28.7967909530048,31.6437236021432,34.8135256323589,42.5432156936135,36.8849573108692,116.650813847037,126.365558278462,131.663425805965,63.1288675532406,66.7022993673873,139.762001904263,153.831980984269,135.125161631673,74.8787990795843,75.9739661606867,84.1763802244214,129.907993414241,127.259312250952,129.707429268633,71.1916647453521,77.6612401843718,82.8166502950311,65.1129173896806,64.9214864443909,96.5549129375057,35.2126798999306,83.8088601584251,73.0458511528228,47.3233132339763,31.9586526842643,44.7953649059388,39.6363614643078,64.9638986291137,41.290659518735,41.7554290316241,39.7472587042389,33.213920003972,66.3372507148165,55.1803852881567,96.8259910885254,49.7746692207332,44.8136454893213,48.1383744402687,41.4530044912122,38.4799674653232,54.1180176822589,98.268696060914,60.3728937146153,68.5047326202318,64.8029547289524,65.7150712809434,90.6608932016284,81.8089509556187,70.9449557397653,63.3345183309213,55.7304647728421,61.1478692801207,49.0268170982074,50.4270263260631,57.7814459776179,98.9599093899029,98.6493989091373,54.6678098146386,74.5250074426824,50.3918294034462,57.3086724099522,97.0643343343251,83.26510971299,105.047038366355,86.9121600961382,78.5046454004115,84.3619460911814,77.2268412202526,105.607420312778,62.9499271287071,63.1806896084187,84.3871842104761,80.804795079839,71.2696523743766,82.2883933210446,80.7777823599433,116.002231053014,111.458936647819,98.7616176859542,85.1134089731362,96.1433248480476,90.2036002400498,93.7819491793847,84.8287484494715,83.1361275184538,60.595876974857,66.8791943325816,82.4001864628562,49.8571362992397,51.9842772371725,55.6960458815362,56.131084357121,64.4946664948015,62.8416594498942,62.2638654589103,72.2124730512972,72.0427417184057,61.6214953588581,63.3125227303101,85.7057612975024,65.0011407158248,68.4578325209827,72.6376533530867,64.3279944671462,64.5477338955689,80.6580576749834,81.5925000428814,103.419135441181,55.5103555412781,25.6517049663638,77.8502114453604,80.3538884637117,62.2429838185711,63.9336773055996,58.7078035750458,50.7902421720533,52.6727258314408,63.2443986140202,79.4219259808852,80.7763276487072,81.105060241554,45.8397898413653,59.2218256656662,70.6951520053004,80.4191900041066,76.5465034485183,71.0058734740407,70.667010762324,78.5507573028884,104.291964176904,82.081025187286,80.7427509448424,55.7345483836881,66.7578656816941,60.4763359257784,26.8620620202911,29.090731276754,24.9596944747188,36.717681971319,29.4236134897949,34.1198641387103,45.1682935797773,61.9356566280635,36.2421065408268,54.6319184803947,69.5903572140101,58.0390071993083,63.9024561206193,49.8724809590916,48.7267956577001,89.4205440406367,68.406399649145,71.3786596816073,74.857582826858,74.6314989557437,74.8752970764916,87.6000598460531,109.469976448225,108.925884577378,111.618203582983,97.1079541124096,86.1921035404782,67.6925128914311,100.531095714151,42.2215595029962,42.9685490216781,33.4399705652945,57.3948432313844,87.0184197733832,77.1252897776697,48.0329389953659,49.7367726592615,75.0909562210691,70.6694127176916,96.2942587865611,75.5141401530064,80.8759186919091,101.624474553191,78.9380868266044,73.6484761936506,83.0104333687699,95.7537522936985,95.3837372599565,87.2521457969551,107.179619254653,74.0715852146684,38.4960901185892,57.0534494964206,53.2089460257962,47.3398750187304,46.6576990751621,45.1929667477573,67.1913562237375,76.7056169197537,64.8825228660193,53.0941753332171,55.8718625447493,54.661837921539,85.109901438447,87.5096916992168,89.3868504938834,84.663128837479,73.0641762606167,70.2773141352158,68.7814906116866,85.859115650317,48.1077001530606,42.366414172764,59.1016106787298,79.9698326766178,112.540705407046,56.513210657682,67.8034913937815,63.3583873015936,71.4128049743134,87.7061678509711,40.4963987490911,62.12244725693,51.2988840814101,47.0921142511728,34.3102511579773,35.003060500598,92.1283090566696,100.205239863739,92.7321824227684,45.8241896647254,80.9820143567706,72.7883692314118,64.2631777889717,65.0264600604998,58.957892211468,58.2613976382425,82.3228419024346,51.8276765128379,62.8632620465195,78.9100927620396,13.5286305284206,88.6633118040794,76.6072810816362,93.3365704051429,79.8207709092378,72.9890462120162,122.16888543023,95.0492009360836,69.7314640430977,36.7207863655529,26.7867905819815,81.2148580014418,60.2093889411788,61.4211523845667,47.9407836788064,54.0660620915794,53.0479217265977,61.780461053264,59.37118992418,62.0943667181108,82.9130056406398,66.0411512646305,72.7035790318553,66.001323365266,82.7488467445508,58.949899739955,7.76950836809226,3.6782681209885,11.4161539127573,84.0374734040028,59.870709668927,64.6525233663446,70.5271967170127,60.1886524842436,68.8997247992821,60.3026059824402,73.3306257202428,63.5856774671644,78.7844897736239,83.093328712867,80.3276775275849,82.4087801900323,87.4564849339515,74.0397245805103,84.8980503238565,101.751342717263,67.9519750901454,61.992212852415,74.2030595703057,73.9050903969057,61.1178501454442,58.513956255846,57.7654577265267,57.6149642821458,64.6372214720111,61.4921872918608,51.5964706159052,60.6318193274112,57.033420672924,60.9655924842334,67.7923306777405,65.2033165167323,56.0436825092497,60.6459550953717,61.3735961769894,52.8877902354826,58.8937389169883,56.1037168200788,62.5827379761949,62.6994244477323,56.1588876719412,57.0861273820119,63.5563252798633,51.6250889925119,62.0461144789431,62.057823896605,65.0677358639806,53.1433365267863,66.1669675665315,71.1960147123146,58.2489705029067,76.2792241871459,80.1498111368454,67.9421570888108,59.8219015900687
|short_description=p1@Hp1bp3
|short_description=p1@Hp1bp3
}}
}}

Revision as of 21:24, 14 November 2012

Short description:p1@Hp1bp3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hp1bp3_5end
Coexpression cluster:MCL_coexpression_mm9:321
Association with transcript: 0bp_to_ENSMUST00000030541, ENSMUST00000097836, ENSMUST00000105825, ENSMUST00000105826, ENSMUST00000124305, ENSMUST00000137865, NM_001122896, NM_010470, uc008vkg.2, uc008vkh.2, uc008vki.2, uc008vkj.2, uc008vkk.2_5end
EntrezGene:Hp1bp3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hp1bp3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G782.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I531.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I635.94
CD326+ enterocyte, pool1.CNhs13542.11848-124I352.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I441.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I733.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I832.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E953.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E718.72
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F218.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E454.27
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E838.46
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A130.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A333.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A553.17
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A242.43
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A446.34
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A639.89
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A345.41
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H280.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I985.41
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D137.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.92
GP2+ M cell, pool1.CNhs13228.11845-124H931.01
GP2+ M cell, pool2.CNhs13231.11846-124I138.77
GP2+ M cell, pool3.CNhs13240.11847-124I233.61
Ileum epithelium, pool1.CNhs13199.10252-104B945.61
Ileum epithelium, pool2.CNhs13232.10253-104C159.23
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C826.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F542.46
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F636.90
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F742.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G893.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H160.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H372.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G981.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H298.36
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H479.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D860.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D954.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B342.95
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B732.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C240.55
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B855.36
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C348.80
Mouse Astrocytes, donor2.CNhs12078.11552-120C452.63
Mouse Astrocytes, donor3.CNhs12107.11633-122C448.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A232.89
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I954.40
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A165.87
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C141.42
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E159.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C550.02
Mouse Granule cells, donor1.CNhs12131.11713-123C3142.03
Mouse Granule cells, donor2.CNhs12357.11731-123E3140.18
Mouse Granule cells, donor3.CNhs12108.11636-122C7115.36
Mouse Meningeal cells, donor1.CNhs12132.11716-123C638.63
Mouse Meningeal cells, donor3.CNhs12109.11639-122D140.02
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C728.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E731.64
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D234.81
Mouse Microglia, donor1.CNhs12629.11718-123C842.54
Mouse Microglia, donor2.CNhs12634.11736-123E836.88
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5116.65
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5126.37
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9131.66
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F163.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D566.70
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2139.76
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2153.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6135.13
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D374.88
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F375.97
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D784.18
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4129.91
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4127.26
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8129.71
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E471.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E577.66
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I682.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D665.11
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F664.92
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E196.55
Mouse Schwann, donor1.CNhs12507.11728-123D935.21
Mouse Schwann, donor2.CNhs12573.11746-123F983.81
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G373.05
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F747.32
Mouse hepatocyte, donor1.CNhs13078.11714-123C431.96
Mouse hepatocyte, donor3.CNhs12615.11637-122C844.80
Mouse hepatocyte, donor6.CNhs13090.11822-124F439.64
Mouse hepatocyte, donor8.CNhs13091.11824-124F664.96
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A741.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I741.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E339.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I833.21
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G666.34
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H155.18
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I896.83
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G144.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G248.14
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G341.45
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B638.48
accessory axillary lymph node, adult.CNhs10475.1063-29H954.12
adrenal gland, adult.CNhs10508.49-24D798.27
adrenal gland, embryo E14.CNhs11038.406-44C560.37
adrenal gland, embryo E16.CNhs11004.1254-43D668.50
adrenal gland, embryo E17.CNhs11043.1263-45I164.80
adrenal gland, embryo E18.CNhs11026.1262-18F565.72
adrenal gland, neonate N00.CNhs11191.1311-23C190.66
adrenal gland, neonate N25.CNhs11223.1377-27I381.81
amnion, adult pregnant day17.5.CNhs10488.583-22A870.94
aorta, adult.CNhs10498.46-23H163.33
bone (os femoris), adult.CNhs10483.56-12G255.73
bone (os femoris), neonate N02.CNhs11227.1985-43F561.15
bone (os femoris), neonate N16.CNhs11225.1525-43A649.03
bone (os femoris), neonate N20.CNhs11195.1350-25C350.43
cecum, adult.CNhs10467.37-13H457.78
cerebellum, adult.CNhs10494.15-8B298.96
cerebellum, neonate N30.CNhs11135.1395-42I298.65
colon, adult.CNhs10468.36-18H754.67
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C774.53
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D150.39
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D457.31
corpora quadrigemina, adult.CNhs10501.16-22A497.06
corpus striatum, adult.CNhs10487.19-21D883.27
corpus striatum, neonate N00.CNhs11226.630-43F1105.05
cortex, adult.CNhs10473.12-14D586.91
cortex, neonate N30.CNhs11107.1392-42F278.50
diencephalon, adult.CNhs10482.20-12F284.36
diencephalon, neonate N30.CNhs11201.1388-42B277.23
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1105.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A262.95
epididymis, adult.CNhs10490.58-23B263.18
eyeball, adult.CNhs10484.31-12G484.39
eyeball, embryo E12.CNhs11016.345-16C680.80
eyeball, embryo E14.CNhs10521.399-16E271.27
eyeball, embryo E15.CNhs10593.426-16C982.29
eyeball, embryo E17.CNhs11023.1261-18D480.78
eyeball, neonate N00.CNhs11207.633-15C6116.00
eyeball, neonate N01.CNhs11140.1532-43E7111.46
eyeball, neonate N02.CNhs11205.1551-44G898.76
eyeball, neonate N16.CNhs11188.777-19A285.11
forelimb, embryo E11.CNhs10596.335-25E296.14
forelimb, embryo E12.CNhs10600.359-14H290.20
forelimb, embryo E13.CNhs10589.384-1E293.78
forelimb, embryo E14.CNhs10577.413-26A884.83
forelimb, embryo E15.CNhs11007.437-20E783.14
forelimb, embryo E17.CNhs10598.1517-43C460.60
forelimb, embryo E18.CNhs11008.1520-43B566.88
gonad, embryo E13.CNhs11044.1564-45I682.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C849.86
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D251.98
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D555.70
heart, embryo E11.CNhs10586.331-24E956.13
heart, embryo E12.CNhs11015.353-12F564.49
heart, embryo E13.CNhs11013.376-3I962.84
heart, embryo E14.CNhs10597.403-26D462.26
heart, embryo E15.CNhs11017.431-16C872.21
heart, embryo E16.CNhs11021.457-17C672.04
heart, embryo E17.CNhs11025.479-18E561.62
heart, embryo E18.CNhs11030.1283-20G363.31
heart, neonate N00.CNhs11213.639-21E385.71
heart, neonate N03.CNhs11221.1349-25I265.00
heart, neonate N10.CNhs11118.749-24G168.46
heart, neonate N16.CNhs11209.782-15G172.64
heart, neonate N20.CNhs11127.821-26I664.33
heart, neonate N25.CNhs11196.1351-25D364.55
heart, neonate N30.CNhs11202.1390-42D280.66
hippocampus, adult.CNhs10478.13-16E881.59
hippocampus, neonate N00.CNhs11228.627-43G1103.42
intestinal mucosa, adult.CNhs10506.860-29I355.51
intestine, adult.CNhs10496.178-9A325.65
intestine, embryo E12.CNhs11019.1251-16I577.85
intestine, embryo E13.CNhs11010.381-16D580.35
intestine, embryo E15.CNhs10602.976-16D862.24
intestine, embryo E16.CNhs10585.463-22H463.93
intestine, embryo E17.CNhs10582.482-18D358.71
intestine, embryo E18.CNhs10526.1289-20F750.79
intestine, neonate N00.CNhs11126.644-26D152.67
intestine, neonate N01.CNhs11192.1322-23E963.24
intestine, neonate N06.CNhs11102.688-20B879.42
intestine, neonate N07.CNhs11095.720-20F280.78
intestine, neonate N10.CNhs11098.755-23A581.11
intestine, neonate N20.CNhs11187.827-18D145.84
intestine, neonate N25.CNhs11121.1352-25E359.22
intestine, neonate N30.CNhs11131.1384-42G170.70
kidney, embryo E14.CNhs10606.411-4I980.42
kidney, embryo E15.CNhs10997.434-16F876.55
kidney, embryo E16.CNhs10584.464-22A571.01
kidney, embryo E17.CNhs11028.483-18I270.67
kidney, embryo E18.CNhs11001.1288-20C778.55
kidney, neonate N00.CNhs11214.646-21G7104.29
kidney, neonate N10.CNhs11206.758-6D582.08
kidney, neonate N20.CNhs11113.832-19I180.74
kidney, neonate N25.CNhs11122.1353-25F355.73
kidney, neonate N30.CNhs11203.1385-42H166.76
liver, adult pregnant day01.CNhs10466.508-5B260.48
liver, embryo E12.CNhs10601.355-15F826.86
liver, embryo E13.CNhs10524.378-3H629.09
liver, embryo E14.CNhs10594.409-16E124.96
liver, embryo E15.CNhs10520.433-16D736.72
liver, embryo E16.CNhs10523.462-17F529.42
liver, embryo E17.CNhs10510.481-18A334.12
liver, embryo E18.CNhs10579.499-43G445.17
liver, neonate N00.CNhs11117.641-24F461.94
liver, neonate N03.CNhs11123.1345-25G236.24
liver, neonate N06.CNhs11101.684-20A854.63
liver, neonate N07.CNhs11103.716-20H269.59
liver, neonate N10.CNhs11115.751-24B958.04
liver, neonate N20.CNhs11220.823-25A363.90
liver, neonate N25.CNhs11198.1368-26H149.87
liver, neonate N30.CNhs11106.1382-42D148.73
lung, adult.CNhs10474.28-22B189.42
lung, embryo E12.CNhs10522.354-16G268.41
lung, embryo E14.CNhs10604.404-26F871.38
lung, embryo E15.CNhs11020.432-17C574.86
lung, embryo E16.CNhs10998.458-17B674.63
lung, embryo E17.CNhs10605.480-44A674.88
lung, embryo E18.CNhs10583.1287-20I687.60
lung, neonate N00.CNhs11224.640-42C6109.47
lung, neonate N06.CNhs11212.683-20E5108.93
lung, neonate N07.CNhs11111.715-19A3111.62
lung, neonate N10.CNhs11219.750-23E697.11
lung, neonate N20.CNhs11109.822-18A486.19
lung, neonate N25.CNhs11119.1359-25C767.69
lung, neonate N30.CNhs11133.1394-42H2100.53
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A142.22
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A142.97
mammary gland, adult lactating day02.CNhs10480.595-22B633.44
mammary gland, adult pregnant day19.CNhs10476.588-5H257.39
medulla oblongata, adult.CNhs10477.17-12C287.02
medulla oblongata, neonate N30.CNhs11200.1396-42A377.13
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C748.03
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C249.74
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E175.09
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E270.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E396.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D775.51
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D880.88
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9101.62
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D478.94
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D573.65
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D683.01
olfactory brain, adult.CNhs10489.18-22I995.75
ovary, adult.CNhs10507.91-2I795.38
ovary, embryo E18.CNhs11040.505-44H787.25
ovary, neonate N00.CNhs11217.1299-22I4107.18
oviduct, adult pregnant day01.CNhs10500.988-6G674.07
pancreas, adult.CNhs10486.34-16E438.50
pancreas, embryo E14.CNhs11012.405-44F457.05
pancreas, embryo E15.CNhs11042.1556-45F253.21
pancreas, embryo E16.CNhs11003.460-26E547.34
pancreas, embryo E17.CNhs10599.1558-45G346.66
pancreas, embryo E18.CNhs10580.1535-43I745.19
pancreas, neonate N00.CNhs11105.645-26G967.19
pancreas, neonate N01.CNhs11138.1531-43D776.71
pancreas, neonate N02.CNhs11139.1539-43D864.88
pancreas, neonate N16.CNhs11136.787-43B653.09
pancreas, neonate N25.CNhs11094.1555-45E255.87
pancreas, neonate N30.CNhs11182.1548-44H554.66
pituitary gland, adult.CNhs10493.21-1G885.11
pituitary gland, embryo E12.CNhs11018.346-16E687.51
pituitary gland, embryo E13.CNhs11009.370-44C789.39
pituitary gland, embryo E14.CNhs11037.398-44A584.66
pituitary gland, embryo E15.CNhs10592.427-16B973.06
pituitary gland, embryo E16.CNhs11036.449-43F670.28
pituitary gland, embryo E17.CNhs11039.1265-44F568.78
pituitary gland, neonate N00.CNhs11190.1308-22E985.86
placenta, adult pregnant day10.CNhs10472.539-13I748.11
placenta, adult pregnant day17.CNhs10464.577-18G342.37
prostate, adult.CNhs10470.859-1F859.10
skin, adult.CNhs10492.30-1C379.97
skin, neonate N00.CNhs11124.650-25G4112.54
skin, neonate N03.CNhs11215.662-22H356.51
skin, neonate N06.CNhs11097.693-20I567.80
skin, neonate N10.CNhs11108.762-6C463.36
small intestine, neonate N16.CNhs11114.790-21I171.41
spinal cord, adult.CNhs10505.24-13C987.71
spleen, adult.CNhs10465.25-2G240.50
spleen, embryo E16.CNhs11035.461-43C162.12
spleen, embryo E18.CNhs11011.1271-21F251.30
spleen, neonate N10.CNhs11116.752-24D147.09
spleen, neonate N20.CNhs11112.824-19H134.31
spleen, neonate N25.CNhs11099.1354-25G335.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C692.13
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9100.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D392.73
stomach, adult.CNhs10503.33-1H645.82
stomach, embryo E12.CNhs10588.356-43E380.98
stomach, embryo E15.CNhs10603.1252-16G872.79
stomach, embryo E16.CNhs11022.459-17D464.26
stomach, embryo E17.CNhs11006.1035-18D565.03
stomach, embryo E18.CNhs10999.1286-20C658.96
stomach, neonate N03.CNhs11193.1340-24B858.26
stomach, neonate N07.CNhs11210.718-18A982.32
stomach, neonate N25.CNhs11104.1355-25E451.83
stomach, neonate N30.CNhs11134.1386-42I162.86
submandibular gland, adult.CNhs10469.59-29C178.91
testis, adult.CNhs10504.57-7G513.53
testis, embryo E13.CNhs11031.389-23F588.66
testis, embryo E15.CNhs11034.443-27C576.61
testis, embryo E16.CNhs11033.470-26G593.34
testis, embryo E17.CNhs11029.486-18I579.82
testis, embryo E18.CNhs11027.503-18G572.99
testis, neonate N00.CNhs11189.1300-22B7122.17
testis, neonate N07.CNhs11222.726-26I495.05
testis, neonate N10.CNhs11204.763-44D969.73
testis, neonate N20.CNhs11110.839-18H336.72
testis, neonate N30.CNhs11130.1391-42E226.79
thymus, adult.CNhs10471.38-12B581.21
thymus, embryo E14.CNhs11041.402-44I460.21
thymus, embryo E15.CNhs11005.430-45I261.42
thymus, embryo E16.CNhs11002.456-26C547.94
thymus, embryo E17.CNhs10581.478-18C154.07
thymus, embryo E18.CNhs10595.1273-19G453.05
thymus, neonate N02.CNhs11181.1541-43F861.78
thymus, neonate N03.CNhs11137.2104-43C759.37
thymus, neonate N06.CNhs11197.681-26C462.09
thymus, neonate N07.CNhs11211.713-19D382.91
thymus, neonate N10.CNhs11194.748-24E466.04
thymus, neonate N20.CNhs11186.820-7A272.70
thymus, neonate N25.CNhs11125.1362-25G766.00
thymus, neonate N30.CNhs11132.1393-42G282.75
tongue, adult.CNhs10499.32-1B458.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.68
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.42
urinary bladder, adult.CNhs10481.879-12E484.04
uterus, adult pregnant day19.CNhs10497.590-15F559.87
uterus, adult.CNhs10509.92-27E564.65
vagina, adult.CNhs10502.89-27D570.53
vesicular gland, adult.CNhs10491.51-27F860.19
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A168.90
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A260.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A373.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D763.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A478.78
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A583.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A680.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A782.41
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A887.46
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A974.04
whole body, embryo E11.CNhs11014.324-5I884.90
whole body, embryo E12.CNhs10587.857-27C9101.75
whole body, embryo E13.CNhs10512.372-23H267.95
whole body, embryo E14.5.CNhs10578.420-27D261.99
whole body, embryo E14.CNhs10519.395-14B174.20
whole body, embryo E16.CNhs10514.453-14F273.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G561.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G558.51
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G557.77
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G557.61
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G564.64
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G561.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G551.60
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G560.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G557.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G560.97
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G567.79
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G565.20
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G556.04
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G560.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G561.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G552.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G558.89
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G556.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G562.58
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G562.70
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G556.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G557.09
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G563.56
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G551.63
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G562.05
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G562.06
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G565.07
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G553.14
whole body, embryo E17.5.CNhs10513.490-9F966.17
whole body, embryo E17.CNhs10517.475-3I571.20
whole body, embryo E18.CNhs10516.493-3B358.25
whole body, neonate N00.CNhs10525.657-19C276.28
whole body, neonate N01.CNhs10576.659-23C680.15
whole body, neonate N06.CNhs10515.692-21D167.94
whole body, neonate N10.CNhs10518.761-6B459.82





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron6.92e-1133
neuronal stem cell6.92e-1133
neuroblast6.92e-1133
electrically signaling cell6.92e-1133
CNS neuron (sensu Vertebrata)6.54e-0923
neuroblast (sensu Vertebrata)6.54e-0923
electrically responsive cell1.12e-0739
electrically active cell1.12e-0739

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure5.45e-1695
ectoderm5.45e-1695
presumptive ectoderm5.45e-1695
neurectoderm7.80e-1564
neural plate7.80e-1564
presumptive neural plate7.80e-1564
ecto-epithelium4.17e-1473
pre-chordal neural plate5.76e-1449
central nervous system6.80e-1473
structure with developmental contribution from neural crest1.15e-1392
nervous system1.62e-1375
regional part of nervous system2.73e-1154
brain3.52e-1147
future brain3.52e-1147
neural tube4.16e-1152
neural rod4.16e-1152
future spinal cord4.16e-1152
neural keel4.16e-1152
anterior neural tube7.21e-1140
regional part of brain9.80e-1146
regional part of forebrain2.14e-1039
forebrain2.14e-1039
future forebrain2.14e-1039
brain grey matter3.43e-0829
regional part of telencephalon3.43e-0829
telencephalon3.43e-0829
gray matter4.65e-0834







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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