Personal tools

FFCP PHASE1:Mm9::chr6:97262017..97262032,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 7: Line 7:
|id=chr6:97262017..97262032,-
|id=chr6:97262017..97262032,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,2.26e-08,9;CL:0000789,2.26e-08,9;CL:0002420,2.26e-08,9;CL:0002419,2.26e-08,9;CL:0000790,2.26e-08,9;CL:0000624,7.63e-08,8;CL:0000066,4.02e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!2.00e-16!130;UBERON:0000925!2.00e-16!130;UBERON:0006595!2.00e-16!130;UBERON:0001007!3.84e-16!128;UBERON:0001555!3.84e-16!128;UBERON:0007026!3.84e-16!128;UBERON:0004921!3.81e-15!126;UBERON:0004185!3.81e-15!126;UBERON:0005911!2.73e-11!69;UBERON:0000077!2.98e-11!97;UBERON:0001041!4.07e-10!92;UBERON:0009854!7.19e-10!23;UBERON:0009856!7.19e-10!23;UBERON:0003929!1.07e-09!55;UBERON:0002365!2.24e-09!25;UBERON:0002330!2.24e-09!25;UBERON:0002107!2.73e-09!22;UBERON:0007499!2.73e-09!22;UBERON:0006925!2.73e-09!22;UBERON:0009497!2.73e-09!22;UBERON:0000015!2.73e-09!22;UBERON:0002423!2.73e-09!22;UBERON:0006235!2.73e-09!22;UBERON:0008835!2.73e-09!22;UBERON:0003894!2.73e-09!22;UBERON:0004161!2.73e-09!22;UBERON:0008836!2.73e-09!22;UBERON:0002530!2.59e-08!65;UBERON:0002368!2.33e-07!60;UBERON:0005057!8.20e-07!51
|ontology_enrichment_uberon=UBERON:0004119!2.00e-16!130;UBERON:0000925!2.00e-16!130;UBERON:0006595!2.00e-16!130;UBERON:0001007!3.84e-16!128;UBERON:0001555!3.84e-16!128;UBERON:0007026!3.84e-16!128;UBERON:0004921!3.81e-15!126;UBERON:0004185!3.81e-15!126;UBERON:0005911!2.73e-11!69;UBERON:0000077!2.98e-11!97;UBERON:0001041!4.07e-10!92;UBERON:0009854!7.19e-10!23;UBERON:0009856!7.19e-10!23;UBERON:0003929!1.07e-09!55;UBERON:0002365!2.24e-09!25;UBERON:0002330!2.24e-09!25;UBERON:0002107!2.73e-09!22;UBERON:0007499!2.73e-09!22;UBERON:0006925!2.73e-09!22;UBERON:0009497!2.73e-09!22;UBERON:0000015!2.73e-09!22;UBERON:0002423!2.73e-09!22;UBERON:0006235!2.73e-09!22;UBERON:0008835!2.73e-09!22;UBERON:0003894!2.73e-09!22;UBERON:0004161!2.73e-09!22;UBERON:0008836!2.73e-09!22;UBERON:0002530!2.59e-08!65;UBERON:0002368!2.33e-07!60;UBERON:0005057!8.20e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0001007,3.16e-18,116;UBERON:0001555,3.16e-18,116;UBERON:0007026,3.16e-18,116;UBERON:0004119,1.40e-17,118;UBERON:0000925,1.40e-17,118;UBERON:0006595,1.40e-17,118;UBERON:0004921,7.33e-17,114;UBERON:0009854,1.17e-13,23;UBERON:0009856,1.17e-13,23;UBERON:0002365,1.74e-13,25;UBERON:0002330,1.74e-13,25;UBERON:0002107,9.09e-13,22;UBERON:0007499,9.09e-13,22;UBERON:0006925,9.09e-13,22;UBERON:0009497,9.09e-13,22;UBERON:0000015,9.09e-13,22;UBERON:0002423,9.09e-13,22;UBERON:0006235,9.09e-13,22;UBERON:0008835,9.09e-13,22;UBERON:0003894,9.09e-13,22;UBERON:0004161,9.09e-13,22;UBERON:0008836,9.09e-13,22;UBERON:0001041,3.38e-11,80;UBERON:0003929,2.07e-09,55;UBERON:0005911,3.80e-09,69
|phase1_expression=0.320297694209588,4.88565570695105,5.91499011206397,0.90739263392049,1.50268718983904,4.02910252588535,5.37309073369709,8.00564605337773,25.9051248759067,22.2361300005894,3.76679530096111,2.39316476986009,3.76641605848653,2.88487327982691,0,0.404950534779652,0,0.315462165358238,0.137114433605739,0,0.340173160604279,0,0,5.43974237497583,5.96464130774642,2.8711598205751,7.32295393470427,6.03319451520489,1.71021077510736,1.00812051903972,5.54326276638262,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0.167782606057736,7.25362142011344,2.68875039313971,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,1.13589289999776,0.0755715601067855,2.31891590961342,12.9063581547208,79.5566460438068,24.8263468153396,31.8390444549358,14.3368603871147,5.75822122540183,0,0,0,0.563373679106722,0,0,0,5.84525810730278,3.54703811665138,4.54972000513305,10.1623652949963,2.33044095282455,0.742210695324124,0.520455980298408,0,0.461230994512117,0.150722640552623,0.823120949949934,0.125666591329675,1.48316980640624,1.15679485535929,0,0,0.220841518460394,0.484875253135222,7.45567044872489,0,0,2.04365644166873,0.599075622529601,0.599902730993408,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0,0.305518091550949,0.248813941220186,0,1.05220927943237,0.130120442962704,0,0.180062129805349,0.452114453507145,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0.378212160335639,0.351902248327898,0,0.556094498451196,6.61679116392116,2.67516777330327,0,0,0,0,0,0,0,0.473489471170421,0,0,0,0,0.233530684734339,0.16455984991348,0,0.324275238183423,0.146199987425332,0.439100230582101,0.805238512562231,0.841159794256509,0.205809224758569,3.63460661282178,0.793351699990633,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0.760902504450237,0,2.14108641141214,0.502670417600539,1.79060824837036,1.9496408711912,2.69645822596266,1.72910439899755,1.7922714592893,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.252946148497029,0.885660887877613,0.941992367048249,0.246794327843601,13.3403682189217,0.166845105716094,0,0.224862112384854,1.21716072833102,0.72353147925725,2.03700681425136,3.45235364940973,6.64754429777645,4.11842119782122,11.5014565221884,8.55924179637558,4.99260276983297,9.85057623993736,16.6839594575378,16.8855232477179,1.66277871149944,0,0.325929952884052,0.678980343100753,0.234690248288502,1.84256883185997,1.90434912708811,2.92700471786698,1.10344600874334,0.8858587585951,0.956728611944923,0.655453258862952,0.518054945597687,1.3018415272336,0,0,0,3.58717770196152,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,1.13552068166615,0,0.162886959353576,1.15479086080775,0,0,0,0,0,0.614870295887855,2.06742634534577,0.727067458955011,0.356497378384721,0.316036757935816,0,1.03135543248187,0.340439605753788,0.18006109403131,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0.469343416127421,0.847328283455281,3.08739757276947,19.1268053412117,8.23468576149118,6.81536051688161,8.11731939221328,10.9974402829191,1.1659233465194,0,0,0.206386867963223,0,0,0.136694227721025,0.228778173206523,6.28920190977265,4.19854356970974,4.00779924032829,4.77335309007557,0,0,0.216010681643603,2.09088296014469,3.27543845619266,5.25970950900801,6.4469695465762,5.75863072364865,4.79575401179634,9.32008969630389,0,0.448549638131936,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0.632022241256357,0.608175645870493,0.205421914329655,0.649604114888975,0.179026695667481,0.596044064343795,0.721172697119813,0,0.908698049533329,0.990688486514998,0.201652370273681,0.584747284438515,0.577271049841977,0.701261413089414,14.2840141677583,0,0,0,0.772758376128762,1.31377732815827,1.09890974560359,5.35920947697665,2.00628841614145,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.551530525350042,0.888986911206461,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.754505365544305,0.280924522409647,0.704276676453562,0.804096565378586,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.883193520806384,0.685738504770831,1.06485483695602,0.476872379894642,1.30811774969096,0.752875043322645,0.676916863133412,0.914639864363863,0.526139422875686,0.407412341537585,2.24456908663095,0.355905054372522,0.788035859004508,0.818462086339379,0.929621047115796,1.73615949883027,1.74867404556562,1.40358965067245,2.14871054048298,1.72159498861959,0,0.231867835620421
|phase1_expression=0.320297694209588,4.88565570695105,5.91499011206397,0.90739263392049,1.50268718983904,4.02910252588535,5.37309073369709,8.00564605337773,25.9051248759067,22.2361300005894,3.76679530096111,2.39316476986009,3.76641605848653,2.88487327982691,0,0.404950534779652,0,0.315462165358238,0.137114433605739,0,0.340173160604279,0,0,5.43974237497583,5.96464130774642,2.8711598205751,7.32295393470427,6.03319451520489,1.71021077510736,1.00812051903972,5.54326276638262,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,0.167782606057736,7.25362142011344,2.68875039313971,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,1.13589289999776,0.0755715601067855,2.31891590961342,12.9063581547208,79.5566460438068,24.8263468153396,31.8390444549358,14.3368603871147,5.75822122540183,0,0,0,0.563373679106722,0,0,0,5.84525810730278,3.54703811665138,4.54972000513305,10.1623652949963,2.33044095282455,0.742210695324124,0.520455980298408,0,0.461230994512117,0.150722640552623,0.823120949949934,0.125666591329675,1.48316980640624,1.15679485535929,0,0,0.220841518460394,0.484875253135222,7.45567044872489,0,0,2.04365644166873,0.599075622529601,0.599902730993408,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0,0.305518091550949,0.248813941220186,0,1.05220927943237,0.130120442962704,0,0.180062129805349,0.452114453507145,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0.378212160335639,0.351902248327898,0,0.556094498451196,6.61679116392116,2.67516777330327,0,0,0,0,0,0,0,0.473489471170421,0,0,0,0,0.233530684734339,0.16455984991348,0,0.324275238183423,0.146199987425332,0.439100230582101,0.805238512562231,0.841159794256509,0.205809224758569,3.63460661282178,0.793351699990633,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0.760902504450237,0,2.14108641141214,0.502670417600539,1.79060824837036,1.9496408711912,2.69645822596266,1.72910439899755,1.7922714592893,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.252946148497029,0.885660887877613,0.941992367048249,0.246794327843601,13.3403682189217,0.166845105716094,0,0.224862112384854,1.21716072833102,0.72353147925725,2.03700681425136,3.45235364940973,6.64754429777645,4.11842119782122,11.5014565221884,8.55924179637558,4.99260276983297,9.85057623993736,16.6839594575378,16.8855232477179,1.66277871149944,0,0.325929952884052,0.678980343100753,0.234690248288502,1.84256883185997,1.90434912708811,2.92700471786698,1.10344600874334,0.8858587585951,0.956728611944923,0.655453258862952,0.518054945597687,1.3018415272336,0,0,0,3.58717770196152,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,1.13552068166615,0,0.162886959353576,1.15479086080775,0,0,0,0,0,0.614870295887855,2.06742634534577,0.727067458955011,0.356497378384721,0.316036757935816,0,1.03135543248187,0.340439605753788,0.18006109403131,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.329098041204242,0.304464949114599,0.469343416127421,0.847328283455281,3.08739757276947,19.1268053412117,8.23468576149118,6.81536051688161,8.11731939221328,10.9974402829191,1.1659233465194,0,0,0.206386867963223,0,0,0.136694227721025,0.228778173206523,6.28920190977265,4.19854356970974,4.00779924032829,4.77335309007557,0,0,0.216010681643603,2.09088296014469,3.27543845619266,5.25970950900801,6.4469695465762,5.75863072364865,4.79575401179634,9.32008969630389,0,0.448549638131936,0.165458490457098,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0.632022241256357,0.608175645870493,0.205421914329655,0.649604114888975,0.179026695667481,0.596044064343795,0.721172697119813,0,0.908698049533329,0.990688486514998,0.201652370273681,0.584747284438515,0.577271049841977,0.701261413089414,14.2840141677583,0,0,0,0.772758376128762,1.31377732815827,1.09890974560359,5.35920947697665,2.00628841614145,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.551530525350042,0.888986911206461,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.754505365544305,0.280924522409647,0.704276676453562,0.804096565378586,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.883193520806384,0.685738504770831,1.06485483695602,0.476872379894642,1.30811774969096,0.752875043322645,0.676916863133412,0.914639864363863,0.526139422875686,0.407412341537585,2.24456908663095,0.355905054372522,0.788035859004508,0.818462086339379,0.929621047115796,1.73615949883027,1.74867404556562,1.40358965067245,2.14871054048298,1.72159498861959,0,0.231867835620421
|short_description=p5@Frmd4b
|short_description=p5@Frmd4b
}}
}}

Revision as of 21:33, 14 November 2012

Short description:p5@Frmd4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Frmd4b_5end
Coexpression cluster:NA
Association with transcript: 341bp_to_ENSMUST00000143698, ENSMUST00000167470, uc009dat.1_5end
EntrezGene:Frmd4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Frmd4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E725.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F222.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I17.32
GP2+ M cell, pool3.CNhs13240.11847-124I26.03
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.91
Mouse hepatocyte, donor1.CNhs13078.11714-123C479.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C824.83
Mouse hepatocyte, donor6.CNhs13090.11822-124F431.84
Mouse hepatocyte, donor8.CNhs13091.11824-124F614.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.16
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.79
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B213.34
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F46.65
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H28.56
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A39.85
liver, neonate N25.CNhs11198.1368-26H116.68
liver, neonate N30.CNhs11106.1382-42D116.89
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C319.13
skin, neonate N00.CNhs11124.650-25G48.23
skin, neonate N03.CNhs11215.662-22H36.82
skin, neonate N06.CNhs11097.693-20I58.12
skin, neonate N10.CNhs11108.762-6C411.00
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.01
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B85.26
stomach, neonate N07.CNhs11210.718-18A96.45
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I14.80
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B414.28
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D55.36
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell2.26e-089
alpha-beta T cell2.26e-089
immature T cell2.26e-089
mature T cell2.26e-089
immature alpha-beta T cell2.26e-089
CD4-positive, alpha-beta T cell7.63e-088
epithelial cell4.02e-0725

Uber anatomy
Ontology termp-valuen
digestive system3.16e-18116
digestive tract3.16e-18116
primitive gut3.16e-18116
endoderm-derived structure1.40e-17118
endoderm1.40e-17118
presumptive endoderm1.40e-17118
subdivision of digestive tract7.33e-17114
digestive tract diverticulum1.17e-1323
sac1.17e-1323
exocrine gland1.74e-1325
exocrine system1.74e-1325
liver9.09e-1322
epithelial sac9.09e-1322
digestive gland9.09e-1322
epithelium of foregut-midgut junction9.09e-1322
anatomical boundary9.09e-1322
hepatobiliary system9.09e-1322
foregut-midgut junction9.09e-1322
hepatic diverticulum9.09e-1322
liver primordium9.09e-1322
septum transversum9.09e-1322
liver bud9.09e-1322
foregut3.38e-1180
gut epithelium2.07e-0955
endo-epithelium3.80e-0969







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:97262017..97262032,-&oldid=2343142"