FFCP PHASE1:Mm9::chr10:98376400..98376404,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 8: | Line 8: | ||
|id=chr10:98376400..98376404,- | |id=chr10:98376400..98376404,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.62e-08,32;CL:0002032,1.62e-08,32;CL:0000037,1.62e-08,32;CL:0000837,1.62e-08,32;CL:0000838,3.21e-07,12;CL:0000791,5.13e-07,9;CL:0000789,5.13e-07,9;CL:0002420,5.13e-07,9;CL:0002419,5.13e-07,9;CL:0000790,5.13e-07,9;CL:0002320,6.24e-07,46;CL:0000134,6.24e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.24e-07,46 | |||
|phase1_expression=0.640595388419176,0,0.454999239389536,2.41971369045464,4.50806156951712,0.839396359559449,0.934450562382103,9.55512593467664,4.36445038670167,2.34064526321993,1.36974374580404,0.398860794976682,7.53283211697305,5.24522414513984,0,0.202475267389826,0.699561878128147,1.57731082679119,1.91960207048034,0.42438965179803,0.510259740906419,1.09220046320974,0.783599367416806,0.47997726838022,1.14704640533585,0,0.430761996159075,0.215471232685889,0.190023419456374,0,0.443461021310609,1.90509202037889,0,0,4.04392267651784,1.16364251750945,2.24586291888606,8.37063261473815,9.37602413428561,6.80580867165938,28.8233429135197,12.294818729252,7.2826552954673,1.6366586336825,1.31790010585369,1.46837401729345,0,0.436050312760893,0.219686182734472,0.194429899074283,0,0,5.5368259999053,4.35217285206807,2.01656279485478,0.514518872071894,0,1.03134418455488,0.606949382578793,1.05798195854407,0,0.677689064138264,0,1.7997994345628,2.96659908770092,2.8419204597844,0.898800331555214,0,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0.220868540951614,0.244981598429908,0.191690942036473,0,0,0.255374676170375,0.153606533256243,0.263772575460388,0.274462930807229,0.52091337055676,0.279182999001381,0,0.763991238884051,1.76777151284201,0,1.3047961207771,0.302904773332736,0.68014404096107,2.6087803983151,0.860423876981386,0,0,0,0.448026887097336,0.421333260395256,0.681721290312231,0.519572009205738,0,0.422530259330042,0,0,0,0.649473123033642,1.01343946190039,0.505524445014783,0.68510327831436,0.776813650941515,0.29688427812965,0.693941307064543,0.304465478312141,1.38369298353635,0.301445281105245,0.470354828542819,0.753999547978053,1.97755974187499,0.289198713839823,0.884610551949874,0,0.662524555381181,0,0,2.04946557908083,1.25668024088073,1.02182822083437,1.91704199209472,1.19980546198682,3.30382590389968,0.299581278809645,1.83000241127451,0.628271760564322,0.695297280769106,1.02286182932132,0.20778804455956,1.62241263067758,1.12023300235348,0.497627882440372,2.77995034277042,2.10441855886474,0.260240885925407,0,0.900310649026746,0.452114453507145,0.136072998302656,1.15302348256365,0.374806898238915,1.55222022443409,0,0.567318240503458,0.351902248327898,0.876782929710299,0,1.0447564995665,0.411564272815887,0.995171334092466,2.1066395619397,3.08817488537658,4.26245249093389,0.207125772535502,0.703578179943289,0,0.473489471170421,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.350296027101508,0.493679549740441,0.820837320395476,0.324275238183423,0.877199924551994,0.439100230582101,0.939444931322602,1.89260953707715,0.617427674275707,1.98251269790279,1.05780226665418,0.639864751605702,1.39342003116263,0.257734922644187,0.605050573870028,0.889512175379481,0.190225626112559,1.42358718463353,1.15289268306808,1.00534083520108,0.795825888164603,0.779856348476481,3.59527763461689,0.648414149624083,1.7922714592893,0.758671603812327,0.799739588268102,0,0.814605311381257,0.387904974335251,0.49095073923223,1.20149420536089,0.442830443938806,0.784993639206874,1.23397163921801,0,0.333690211432188,0.196558995113203,0.449724224769707,1.01430060694251,0.482354319504834,0.763877555344259,0.863088412352432,0.324270453550071,0.823684239564244,0,0.744281895337007,0.624075346229121,0,0,0.964887042726734,2.21703828199926,0.189491411770485,0.488894929326078,0.339490171550376,0.469380496577004,1.50755631697634,1.6663054862021,2.34160377429359,0.472905432318573,2.21464689648775,0.797273843287435,1.63863314715738,1.38147985492716,2.16973587872267,3.01582567878545,1.63171705145613,1.47529281905711,0,1.28440471990234,0.820481806145422,0.163934945376675,0.252470927204373,1.57754109708128,0.390438744296638,1.07711698866399,0.477937595905104,0.222798674082394,0.849229592366497,0,0.292255857911312,0.395287777946524,2.57057053137446,0.709700426041343,0.534196811001766,0.81443479676788,0.494910368917606,1.32745138339963,0,0.604647113929502,0.754420319023592,0.590603785761546,1.22974059177571,1.03371317267288,0.727067458955011,2.13898427030833,0,0,0,3.40439605753788,0.36012218806262,0.388076051348264,1.28602221018955,1.41872186913819,1.24858172321449,1.31639216481697,3.04464949114599,0,0.21183207086382,0.882113592219848,0.49465875882444,0.484393280087717,0.904693873922338,0.119372344003136,0.328281799490123,2.33184669303881,0.741701208042039,0.854354403989263,0.619160603889667,1.29636169158798,0.376736914009382,1.23024804948923,0.915112692826091,2.71965487990169,1.95932033253121,1.10559979043539,0,0.632671987162271,0.813277868507395,0.648032044930808,0.627264888043406,0.655087691238533,0.674321731924103,0.578574190077352,1.04702376793612,1.16653475962614,1.24267862617385,0,0.747582730219894,0.330916980914195,0.777804753376191,1.16243841129958,0.675824501963113,1.05621514781179,0.911430693907651,0.629156066554265,1.44950472495604,0.864090018773596,0.632022241256357,0.202725215290164,0.616265742988964,0.129920822977795,0.179026695667481,0,0.240390899039938,0.443068581523732,0.201932899896295,0.228620419965,0.705783295957884,0.584747284438515,0.769694733122636,0.467507608726276,1.13365191807606,0.443971906748129,0.0897138566094757,0,0.965947970160952,0.563047426353546,0.36630324853453,0.214368379079066,1.00314420807073,0.564751842617067,1.38097570952153,0.572895513439397,1.03111909406213,0,0.755393897389701,0,0.45032120322422,2.71885445390523,1.03552062350364,0.518936737920883,0.798049746802062,0.512200817262403,0.729320151204882,1.04806581313991,0.183843508450014,0,0.206035057238894,0.64183841918363,0.505394423527595,1.52087579934144,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.231768651889711,0.38581844092741,0,0.441596760403192,0.342869252385415,0.354951612318675,0.476872379894642,0.581385666529314,0.376437521661322,0.761531471025089,0.914639864363863,0.789209134313529,0.135804113845862,0.561142271657738,0.237270036248348,0.492522411877817,0.818462086339379,0.309873682371932,1.15743966588685,0.499621155875892,0.701794825336225,0.859484216193193,0.765153328275374,0,0 | |phase1_expression=0.640595388419176,0,0.454999239389536,2.41971369045464,4.50806156951712,0.839396359559449,0.934450562382103,9.55512593467664,4.36445038670167,2.34064526321993,1.36974374580404,0.398860794976682,7.53283211697305,5.24522414513984,0,0.202475267389826,0.699561878128147,1.57731082679119,1.91960207048034,0.42438965179803,0.510259740906419,1.09220046320974,0.783599367416806,0.47997726838022,1.14704640533585,0,0.430761996159075,0.215471232685889,0.190023419456374,0,0.443461021310609,1.90509202037889,0,0,4.04392267651784,1.16364251750945,2.24586291888606,8.37063261473815,9.37602413428561,6.80580867165938,28.8233429135197,12.294818729252,7.2826552954673,1.6366586336825,1.31790010585369,1.46837401729345,0,0.436050312760893,0.219686182734472,0.194429899074283,0,0,5.5368259999053,4.35217285206807,2.01656279485478,0.514518872071894,0,1.03134418455488,0.606949382578793,1.05798195854407,0,0.677689064138264,0,1.7997994345628,2.96659908770092,2.8419204597844,0.898800331555214,0,0.207379224616955,0.135005938331691,0.210324961351382,0.285650984403804,0.220868540951614,0.244981598429908,0.191690942036473,0,0,0.255374676170375,0.153606533256243,0.263772575460388,0.274462930807229,0.52091337055676,0.279182999001381,0,0.763991238884051,1.76777151284201,0,1.3047961207771,0.302904773332736,0.68014404096107,2.6087803983151,0.860423876981386,0,0,0,0.448026887097336,0.421333260395256,0.681721290312231,0.519572009205738,0,0.422530259330042,0,0,0,0.649473123033642,1.01343946190039,0.505524445014783,0.68510327831436,0.776813650941515,0.29688427812965,0.693941307064543,0.304465478312141,1.38369298353635,0.301445281105245,0.470354828542819,0.753999547978053,1.97755974187499,0.289198713839823,0.884610551949874,0,0.662524555381181,0,0,2.04946557908083,1.25668024088073,1.02182822083437,1.91704199209472,1.19980546198682,3.30382590389968,0.299581278809645,1.83000241127451,0.628271760564322,0.695297280769106,1.02286182932132,0.20778804455956,1.62241263067758,1.12023300235348,0.497627882440372,2.77995034277042,2.10441855886474,0.260240885925407,0,0.900310649026746,0.452114453507145,0.136072998302656,1.15302348256365,0.374806898238915,1.55222022443409,0,0.567318240503458,0.351902248327898,0.876782929710299,0,1.0447564995665,0.411564272815887,0.995171334092466,2.1066395619397,3.08817488537658,4.26245249093389,0.207125772535502,0.703578179943289,0,0.473489471170421,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.350296027101508,0.493679549740441,0.820837320395476,0.324275238183423,0.877199924551994,0.439100230582101,0.939444931322602,1.89260953707715,0.617427674275707,1.98251269790279,1.05780226665418,0.639864751605702,1.39342003116263,0.257734922644187,0.605050573870028,0.889512175379481,0.190225626112559,1.42358718463353,1.15289268306808,1.00534083520108,0.795825888164603,0.779856348476481,3.59527763461689,0.648414149624083,1.7922714592893,0.758671603812327,0.799739588268102,0,0.814605311381257,0.387904974335251,0.49095073923223,1.20149420536089,0.442830443938806,0.784993639206874,1.23397163921801,0,0.333690211432188,0.196558995113203,0.449724224769707,1.01430060694251,0.482354319504834,0.763877555344259,0.863088412352432,0.324270453550071,0.823684239564244,0,0.744281895337007,0.624075346229121,0,0,0.964887042726734,2.21703828199926,0.189491411770485,0.488894929326078,0.339490171550376,0.469380496577004,1.50755631697634,1.6663054862021,2.34160377429359,0.472905432318573,2.21464689648775,0.797273843287435,1.63863314715738,1.38147985492716,2.16973587872267,3.01582567878545,1.63171705145613,1.47529281905711,0,1.28440471990234,0.820481806145422,0.163934945376675,0.252470927204373,1.57754109708128,0.390438744296638,1.07711698866399,0.477937595905104,0.222798674082394,0.849229592366497,0,0.292255857911312,0.395287777946524,2.57057053137446,0.709700426041343,0.534196811001766,0.81443479676788,0.494910368917606,1.32745138339963,0,0.604647113929502,0.754420319023592,0.590603785761546,1.22974059177571,1.03371317267288,0.727067458955011,2.13898427030833,0,0,0,3.40439605753788,0.36012218806262,0.388076051348264,1.28602221018955,1.41872186913819,1.24858172321449,1.31639216481697,3.04464949114599,0,0.21183207086382,0.882113592219848,0.49465875882444,0.484393280087717,0.904693873922338,0.119372344003136,0.328281799490123,2.33184669303881,0.741701208042039,0.854354403989263,0.619160603889667,1.29636169158798,0.376736914009382,1.23024804948923,0.915112692826091,2.71965487990169,1.95932033253121,1.10559979043539,0,0.632671987162271,0.813277868507395,0.648032044930808,0.627264888043406,0.655087691238533,0.674321731924103,0.578574190077352,1.04702376793612,1.16653475962614,1.24267862617385,0,0.747582730219894,0.330916980914195,0.777804753376191,1.16243841129958,0.675824501963113,1.05621514781179,0.911430693907651,0.629156066554265,1.44950472495604,0.864090018773596,0.632022241256357,0.202725215290164,0.616265742988964,0.129920822977795,0.179026695667481,0,0.240390899039938,0.443068581523732,0.201932899896295,0.228620419965,0.705783295957884,0.584747284438515,0.769694733122636,0.467507608726276,1.13365191807606,0.443971906748129,0.0897138566094757,0,0.965947970160952,0.563047426353546,0.36630324853453,0.214368379079066,1.00314420807073,0.564751842617067,1.38097570952153,0.572895513439397,1.03111909406213,0,0.755393897389701,0,0.45032120322422,2.71885445390523,1.03552062350364,0.518936737920883,0.798049746802062,0.512200817262403,0.729320151204882,1.04806581313991,0.183843508450014,0,0.206035057238894,0.64183841918363,0.505394423527595,1.52087579934144,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.231768651889711,0.38581844092741,0,0.441596760403192,0.342869252385415,0.354951612318675,0.476872379894642,0.581385666529314,0.376437521661322,0.761531471025089,0.914639864363863,0.789209134313529,0.135804113845862,0.561142271657738,0.237270036248348,0.492522411877817,0.818462086339379,0.309873682371932,1.15743966588685,0.499621155875892,0.701794825336225,0.859484216193193,0.765153328275374,0,0 | ||
|short_description=p@chr10:98376400..98376404,- | |short_description=p@chr10:98376400..98376404,- | ||
}} | }} | ||
Revision as of 22:29, 14 November 2012
| Short description: | p@chr10:98376400..98376404, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr10:98376400..98376404, - |
| Coexpression cluster: | MCL_coexpression_mm9:6 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic cell | 1.62e-08 | 32 |
| hematopoietic oligopotent progenitor cell | 1.62e-08 | 32 |
| hematopoietic stem cell | 1.62e-08 | 32 |
| hematopoietic multipotent progenitor cell | 1.62e-08 | 32 |
| lymphoid lineage restricted progenitor cell | 3.21e-07 | 12 |
| mature alpha-beta T cell | 5.13e-07 | 9 |
| alpha-beta T cell | 5.13e-07 | 9 |
| immature T cell | 5.13e-07 | 9 |
| mature T cell | 5.13e-07 | 9 |
| immature alpha-beta T cell | 5.13e-07 | 9 |
| connective tissue cell | 6.24e-07 | 46 |
| mesenchymal cell | 6.24e-07 | 46 |
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 6.24e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
