Personal tools

FFCP PHASE1:Mm9::chrX:39503903..39503928,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chrX:39503903..39503928,+
|id=chrX:39503903..39503928,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001048!2.06e-07!147;UBERON:0002048!4.26e-07!14;UBERON:0000117!4.26e-07!14;UBERON:0000171!4.26e-07!14;UBERON:0000170!4.26e-07!14;UBERON:0005597!4.26e-07!14;UBERON:0000118!4.26e-07!14
|ontology_enrichment_uberon=UBERON:0001048!2.06e-07!147;UBERON:0002048!4.26e-07!14;UBERON:0000117!4.26e-07!14;UBERON:0000171!4.26e-07!14;UBERON:0000170!4.26e-07!14;UBERON:0005597!4.26e-07!14;UBERON:0000118!4.26e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.73e-08,134;UBERON:0002048,4.25e-07,14;UBERON:0000117,4.25e-07,14;UBERON:0000171,4.25e-07,14;UBERON:0000170,4.25e-07,14;UBERON:0005597,4.25e-07,14;UBERON:0000118,4.25e-07,14
|phase1_expression=5.76535849577258,1.74487703819681,2.72999543633722,2.11724947914781,2.00358291978539,2.51818907867835,1.63528848416868,9.94249590500137,27.3130120974233,27.3855495796732,3.08192342805909,6.30200056063158,10.2720437958723,10.2281870830227,3.33109761815663,5.06188168474565,4.89693314689703,7.25562980323947,8.36398044995006,3.39511721438424,3.48677489619386,12.4113689001107,10.9703911438353,4.47978783821539,3.67054849707472,0.57423196411502,0.86152399231815,2.58565479223067,3.42042155021473,4.53654233567875,1.55211357458713,2.54012269383853,1.84519436275371,0,3.46621943701529,4.48833542467929,5.10423390655923,28.4601508901097,20.3147189576188,27.7467584306113,34.7056577938298,25.2726829434625,33.0147040061184,6.04304726282771,5.17022349219524,5.13930906052708,0,1.09012578190223,0.219686182734472,1.1665793944457,0.55994568650145,0,8.38913030288682,5.07753499407941,10.7550015725588,9.51859913333004,6.5902691185914,2.06268836910977,1.21389876515759,0,1.26766280701236,1.35537812827653,0,1.3498495759221,0.988866362566974,0,0.599200221036809,0.768436610643109,2.28117147078651,1.4850653216486,2.3135745748652,0.571301968807607,0.662605622854841,3.30725157880376,1.53352753629178,0.919218786610021,2.20231761998777,2.68143409978894,3.07213066512487,0.395658863190582,0.731901148819277,1.56274011167028,0.558365998002762,4.50210088025344,4.12555268997387,2.94628585473668,3.27454865837937,1.67759501242771,7.34544075331885,8.38844317185319,14.2033599463822,3.44169550792555,0.679971333707751,3.2382191498269,5.84798775702902,4.03224198387602,4.63466586434781,8.01022516116871,7.53379413348319,4.94675404314476,5.21120653173718,5.13305909657271,2.54805239706646,0,1.73192832808971,1.52015919285059,3.53867111510348,6.2801133845483,17.0899003207133,5.04703272820404,6.41895709034703,3.95805121805784,5.76538743140146,4.37095657602605,9.7598626922635,4.14699751387929,5.19109432242185,6.36237170447611,11.4999371753484,8.41187619726528,6.18356251689102,8.24287930329878,0,4.9772735491963,6.28340120440365,4.85368404896324,16.7741174308288,8.39863823390771,12.9611631614526,4.19413790333504,6.8625090422794,5.40313714085317,3.82413504423008,5.62574006126727,4.98691306942944,4.2182728397617,12.6280811174392,9.08170885453679,2.0217820674694,4.41927897361595,9.23855145035196,9.19608417733892,8.64298223065676,11.1521565198429,10.2054748726992,10.5053250633577,7.49613796477831,8.01980449290949,2.80238390812695,10.9681526497335,9.32540958068929,8.76782929710299,14.7365042089567,11.1440693287093,12.9642745937004,11.7430217422911,11.2354109970118,11.0659600059328,11.9348669746149,9.52778553663309,9.85009451920604,10.6236616261999,10.180023630164,11.0187969778546,11.415766353666,12.0917651270212,12.0723030629829,13.4280143722245,7.40519324610662,8.04420573987567,5.35054143002648,4.38599962275997,5.04965265169416,7.78397228810156,6.30869845692382,5.86556290561921,6.60837565967596,4.23120906661671,8.53153002140936,10.2184135618593,8.50525244725816,7.66397393568702,5.11469500843202,7.98947629672748,2.84717436926707,6.75265714368445,8.79673230800943,6.16765063327568,5.06906626509712,4.49409704327111,5.40345124686736,4.97853183135918,0.948339504765408,9.48262654660749,9.01661885384643,12.4227309985642,8.92181440971078,10.0995580642059,6.89278254654404,6.19962621514329,4.08196692387575,5.42947521255922,4.74324203339438,8.3422552858047,8.64859578498093,6.07127703439105,7.1001042485976,7.23531479257251,6.11102044275408,8.0554918486227,9.72811360650212,4.94210543738547,10.0637744569148,9.67566463938109,5.30464044294753,3.78868316920668,3.76734568396016,8.20153986317724,11.2699446001629,9.09558776498327,10.2667935158476,14.2585872051158,9.62230017982859,12.3954630506944,16.4250112211349,13.6593553500459,13.8718926813448,11.5161638617363,10.3645599627367,13.6006551214063,8.28887912956299,12.5844680965915,9.04747703635634,15.7732648307426,1.96705709207614,6.07060841870411,3.85321415970701,5.74337264301796,6.22952792431367,10.6037789425837,7.2566890465739,10.5418460960092,10.3403230911743,8.36390792833932,10.0259403337077,8.20921939287614,10.1202675418724,6.72188473196017,13.4397844501818,4.4984984299053,7.52282451603824,2.84904965867608,12.0536349921646,8.24850614862677,5.30980553359851,6.79785781233948,3.62788268357701,5.65815239267694,2.06711325016541,5.53383266299069,9.04499026088774,6.18007340111759,5.34746067577082,5.05658812697306,4.21674434299995,5.15677716240934,8.85142974959849,8.10274923140896,1.68166288917581,5.5727629108214,8.86701168211368,7.66985915688903,9.05019613311665,4.26250928760439,6.8054795338476,3.60114520468494,6.61585194164886,5.27636009412736,15.339120536111,11.5197686612778,9.31104283224465,7.55048138827282,5.24665505933731,6.30446026835733,8.71441492069049,8.87463532241857,11.2968661695524,7.72310673719233,6.83471138605126,8.00723606222829,15.1280802694531,17.2140286358099,12.2997976685937,1.90934123603023,9.01557581706236,10.5726122905961,8.3164112432787,7.10900206449194,5.24070152990826,5.12484516262319,6.86023682520288,4.4498510137285,4.27729411862916,4.97071450469541,0,8.22341003241883,5.79104716599842,8.75030347548214,6.71631082084202,8.27885014904813,14.2002258761362,7.03103678157331,4.71867049915699,0.483168241652012,2.01621004380506,12.324433704499,5.0681303822541,7.49789987303239,10.133824192268,12.1738153053887,7.3512101269068,8.77426781495773,11.8151621739662,12.6208062435185,11.202400578285,10.7884018096419,9.74578807397524,10.8719381053572,9.23327527234395,2.72076460338254,2.44184548711471,3.49884040776955,3.52557694364565,6.18206700903009,7.13193406714492,6.41030684935428,3.64426244434412,7.02200945649509,6.21227026878773,4.14292712856459,3.43737308063638,3.95262319390481,2.05524755931193,5.2877572817279,4.72515750162264,5.40385443869065,4.98456649882625,3.10656187051092,9.85979802049678,9.17757208822371,8.87814749921498,8.75184181445858,5.24032906569956,4.96377472815038,8.00088220085815,6.18105171716683,6.73930340142812,5.55933865880354,7.09742039692671,9.61994341068989,8.80230170216895,6.59459069770154,8.84506221916444,8.57328644309533,6.2577536010222,7.7163688185482,10.3021475200827,8.39033844766065,3.77156177623957,8.16388708332953,8.82213902805088,7.55801366488108,7.52875043322645,8.54607539705933,7.13419094203813,6.83981249738391,8.41985505844343,10.1005608898393,9.37216643180976,6.40279135441163,6.13846564754534,6.04253680625267,5.98010494041538,4.24677982494508,7.71974307869848,8.80971321598023,8.7992632751668,6.83833399270498,6.02856372613096
|phase1_expression=5.76535849577258,1.74487703819681,2.72999543633722,2.11724947914781,2.00358291978539,2.51818907867835,1.63528848416868,9.94249590500137,27.3130120974233,27.3855495796732,3.08192342805909,6.30200056063158,10.2720437958723,10.2281870830227,3.33109761815663,5.06188168474565,4.89693314689703,7.25562980323947,8.36398044995006,3.39511721438424,3.48677489619386,12.4113689001107,10.9703911438353,4.47978783821539,3.67054849707472,0.57423196411502,0.86152399231815,2.58565479223067,3.42042155021473,4.53654233567875,1.55211357458713,2.54012269383853,1.84519436275371,0,3.46621943701529,4.48833542467929,5.10423390655923,28.4601508901097,20.3147189576188,27.7467584306113,34.7056577938298,25.2726829434625,33.0147040061184,6.04304726282771,5.17022349219524,5.13930906052708,0,1.09012578190223,0.219686182734472,1.1665793944457,0.55994568650145,0,8.38913030288682,5.07753499407941,10.7550015725588,9.51859913333004,6.5902691185914,2.06268836910977,1.21389876515759,0,1.26766280701236,1.35537812827653,0,1.3498495759221,0.988866362566974,0,0.599200221036809,0.768436610643109,2.28117147078651,1.4850653216486,2.3135745748652,0.571301968807607,0.662605622854841,3.30725157880376,1.53352753629178,0.919218786610021,2.20231761998777,2.68143409978894,3.07213066512487,0.395658863190582,0.731901148819277,1.56274011167028,0.558365998002762,4.50210088025344,4.12555268997387,2.94628585473668,3.27454865837937,1.67759501242771,7.34544075331885,8.38844317185319,14.2033599463822,3.44169550792555,0.679971333707751,3.2382191498269,5.84798775702902,4.03224198387602,4.63466586434781,8.01022516116871,7.53379413348319,4.94675404314476,5.21120653173718,5.13305909657271,2.54805239706646,0,1.73192832808971,1.52015919285059,3.53867111510348,6.2801133845483,17.0899003207133,5.04703272820404,6.41895709034703,3.95805121805784,5.76538743140146,4.37095657602605,9.7598626922635,4.14699751387929,5.19109432242185,6.36237170447611,11.4999371753484,8.41187619726528,6.18356251689102,8.24287930329878,0,4.9772735491963,6.28340120440365,4.85368404896324,16.7741174308288,8.39863823390771,12.9611631614526,4.19413790333504,6.8625090422794,5.40313714085317,3.82413504423008,5.62574006126727,4.98691306942944,4.2182728397617,12.6280811174392,9.08170885453679,2.0217820674694,4.41927897361595,9.23855145035196,9.19608417733892,8.64298223065676,11.1521565198429,10.2054748726992,10.5053250633577,7.49613796477831,8.01980449290949,2.80238390812695,10.9681526497335,9.32540958068929,8.76782929710299,14.7365042089567,11.1440693287093,12.9642745937004,11.7430217422911,11.2354109970118,11.0659600059328,11.9348669746149,9.52778553663309,9.85009451920604,10.6236616261999,10.180023630164,11.0187969778546,11.415766353666,12.0917651270212,12.0723030629829,13.4280143722245,7.40519324610662,8.04420573987567,5.35054143002648,4.38599962275997,5.04965265169416,7.78397228810156,6.30869845692382,5.86556290561921,6.60837565967596,4.23120906661671,8.53153002140936,10.2184135618593,8.50525244725816,7.66397393568702,5.11469500843202,7.98947629672748,2.84717436926707,6.75265714368445,8.79673230800943,6.16765063327568,5.06906626509712,4.49409704327111,5.40345124686736,4.97853183135918,0.948339504765408,9.48262654660749,9.01661885384643,12.4227309985642,8.92181440971078,10.0995580642059,6.89278254654404,6.19962621514329,4.08196692387575,5.42947521255922,4.74324203339438,8.3422552858047,8.64859578498093,6.07127703439105,7.1001042485976,7.23531479257251,6.11102044275408,8.0554918486227,9.72811360650212,4.94210543738547,10.0637744569148,9.67566463938109,5.30464044294753,3.78868316920668,3.76734568396016,8.20153986317724,11.2699446001629,9.09558776498327,10.2667935158476,14.2585872051158,9.62230017982859,12.3954630506944,16.4250112211349,13.6593553500459,13.8718926813448,11.5161638617363,10.3645599627367,13.6006551214063,8.28887912956299,12.5844680965915,9.04747703635634,15.7732648307426,1.96705709207614,6.07060841870411,3.85321415970701,5.74337264301796,6.22952792431367,10.6037789425837,7.2566890465739,10.5418460960092,10.3403230911743,8.36390792833932,10.0259403337077,8.20921939287614,10.1202675418724,6.72188473196017,13.4397844501818,4.4984984299053,7.52282451603824,2.84904965867608,12.0536349921646,8.24850614862677,5.30980553359851,6.79785781233948,3.62788268357701,5.65815239267694,2.06711325016541,5.53383266299069,9.04499026088774,6.18007340111759,5.34746067577082,5.05658812697306,4.21674434299995,5.15677716240934,8.85142974959849,8.10274923140896,1.68166288917581,5.5727629108214,8.86701168211368,7.66985915688903,9.05019613311665,4.26250928760439,6.8054795338476,3.60114520468494,6.61585194164886,5.27636009412736,15.339120536111,11.5197686612778,9.31104283224465,7.55048138827282,5.24665505933731,6.30446026835733,8.71441492069049,8.87463532241857,11.2968661695524,7.72310673719233,6.83471138605126,8.00723606222829,15.1280802694531,17.2140286358099,12.2997976685937,1.90934123603023,9.01557581706236,10.5726122905961,8.3164112432787,7.10900206449194,5.24070152990826,5.12484516262319,6.86023682520288,4.4498510137285,4.27729411862916,4.97071450469541,0,8.22341003241883,5.79104716599842,8.75030347548214,6.71631082084202,8.27885014904813,14.2002258761362,7.03103678157331,4.71867049915699,0.483168241652012,2.01621004380506,12.324433704499,5.0681303822541,7.49789987303239,10.133824192268,12.1738153053887,7.3512101269068,8.77426781495773,11.8151621739662,12.6208062435185,11.202400578285,10.7884018096419,9.74578807397524,10.8719381053572,9.23327527234395,2.72076460338254,2.44184548711471,3.49884040776955,3.52557694364565,6.18206700903009,7.13193406714492,6.41030684935428,3.64426244434412,7.02200945649509,6.21227026878773,4.14292712856459,3.43737308063638,3.95262319390481,2.05524755931193,5.2877572817279,4.72515750162264,5.40385443869065,4.98456649882625,3.10656187051092,9.85979802049678,9.17757208822371,8.87814749921498,8.75184181445858,5.24032906569956,4.96377472815038,8.00088220085815,6.18105171716683,6.73930340142812,5.55933865880354,7.09742039692671,9.61994341068989,8.80230170216895,6.59459069770154,8.84506221916444,8.57328644309533,6.2577536010222,7.7163688185482,10.3021475200827,8.39033844766065,3.77156177623957,8.16388708332953,8.82213902805088,7.55801366488108,7.52875043322645,8.54607539705933,7.13419094203813,6.83981249738391,8.41985505844343,10.1005608898393,9.37216643180976,6.40279135441163,6.13846564754534,6.04253680625267,5.98010494041538,4.24677982494508,7.71974307869848,8.80971321598023,8.7992632751668,6.83833399270498,6.02856372613096
|short_description=p3@Stag2
|short_description=p3@Stag2
}}
}}

Revision as of 23:41, 14 November 2012

Short description:p3@Stag2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Stag2_5end
Coexpression cluster:MCL_coexpression_mm9:298
Association with transcript: 25bp_to_ENSMUST00000069619, NM_021465, uc009taz.1_5end
EntrezGene:Stag2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Stag2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E727.31
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F227.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.30
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.27
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.36
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.41
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.97
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C14.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.47
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G828.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H120.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H327.75
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G934.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H225.27
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.17
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.14
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.39
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.52
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D97.35
Mouse Schwann, donor2.CNhs12573.11746-123F98.39
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.20
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.21
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.28
accessory axillary lymph node, adult.CNhs10475.1063-29H917.09
adrenal gland, adult.CNhs10508.49-24D75.05
adrenal gland, embryo E14.CNhs11038.406-44C56.42
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I15.77
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C19.76
adrenal gland, neonate N25.CNhs11223.1377-27I34.15
amnion, adult pregnant day17.5.CNhs10488.583-22A85.19
aorta, adult.CNhs10498.46-23H16.36
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F58.41
bone (os femoris), neonate N16.CNhs11225.1525-43A66.18
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I26.28
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C716.77
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.96
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F15.40
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B24.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.08
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G44.42
eyeball, embryo E12.CNhs11016.345-16C69.24
eyeball, embryo E14.CNhs10521.399-16E29.20
eyeball, embryo E15.CNhs10593.426-16C98.64
eyeball, embryo E17.CNhs11023.1261-18D411.15
eyeball, neonate N00.CNhs11207.633-15C610.21
eyeball, neonate N01.CNhs11140.1532-43E710.51
eyeball, neonate N02.CNhs11205.1551-44G87.50
eyeball, neonate N16.CNhs11188.777-19A28.02
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H210.97
forelimb, embryo E13.CNhs10589.384-1E29.33
forelimb, embryo E14.CNhs10577.413-26A88.77
forelimb, embryo E15.CNhs11007.437-20E714.74
forelimb, embryo E17.CNhs10598.1517-43C411.14
forelimb, embryo E18.CNhs11008.1520-43B512.96
gonad, embryo E13.CNhs11044.1564-45I611.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.24
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.07
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.93
heart, embryo E11.CNhs10586.331-24E99.53
heart, embryo E12.CNhs11015.353-12F59.85
heart, embryo E13.CNhs11013.376-3I910.62
heart, embryo E14.CNhs10597.403-26D410.18
heart, embryo E15.CNhs11017.431-16C811.02
heart, embryo E16.CNhs11021.457-17C611.42
heart, embryo E17.CNhs11025.479-18E512.09
heart, embryo E18.CNhs11030.1283-20G312.07
heart, neonate N00.CNhs11213.639-21E313.43
heart, neonate N03.CNhs11221.1349-25I27.41
heart, neonate N10.CNhs11118.749-24G18.04
heart, neonate N16.CNhs11209.782-15G15.35
heart, neonate N20.CNhs11127.821-26I64.39
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D27.78
hippocampus, adult.CNhs10478.13-16E86.31
hippocampus, neonate N00.CNhs11228.627-43G15.87
intestinal mucosa, adult.CNhs10506.860-29I36.61
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I58.53
intestine, embryo E13.CNhs11010.381-16D510.22
intestine, embryo E15.CNhs10602.976-16D88.51
intestine, embryo E16.CNhs10585.463-22H47.66
intestine, embryo E17.CNhs10582.482-18D35.11
intestine, embryo E18.CNhs10526.1289-20F77.99
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E96.75
intestine, neonate N06.CNhs11102.688-20B88.80
intestine, neonate N07.CNhs11095.720-20F26.17
intestine, neonate N10.CNhs11098.755-23A55.07
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F89.48
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I212.42
kidney, embryo E18.CNhs11001.1288-20C78.92
kidney, neonate N00.CNhs11214.646-21G710.10
kidney, neonate N10.CNhs11206.758-6D56.89
kidney, neonate N20.CNhs11113.832-19I16.20
kidney, neonate N25.CNhs11122.1353-25F34.08
kidney, neonate N30.CNhs11203.1385-42H15.43
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F88.34
liver, embryo E13.CNhs10524.378-3H68.65
liver, embryo E14.CNhs10594.409-16E16.07
liver, embryo E15.CNhs10520.433-16D77.10
liver, embryo E16.CNhs10523.462-17F57.24
liver, embryo E17.CNhs10510.481-18A36.11
liver, embryo E18.CNhs10579.499-43G48.06
liver, neonate N00.CNhs11117.641-24F49.73
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H29.68
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B111.27
lung, embryo E12.CNhs10522.354-16G29.10
lung, embryo E14.CNhs10604.404-26F810.27
lung, embryo E15.CNhs11020.432-17C514.26
lung, embryo E16.CNhs10998.458-17B69.62
lung, embryo E17.CNhs10605.480-44A612.40
lung, embryo E18.CNhs10583.1287-20I616.43
lung, neonate N00.CNhs11224.640-42C613.66
lung, neonate N06.CNhs11212.683-20E513.87
lung, neonate N07.CNhs11111.715-19A311.52
lung, neonate N10.CNhs11219.750-23E610.36
lung, neonate N20.CNhs11109.822-18A413.60
lung, neonate N25.CNhs11119.1359-25C78.29
lung, neonate N30.CNhs11133.1394-42H212.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A115.77
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H26.07
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A35.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.23
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.60
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.54
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.34
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.36
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.03
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.21
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.12
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.72
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.44
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I77.52
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I412.05
oviduct, adult pregnant day01.CNhs10500.988-6G68.25
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F46.80
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E55.66
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G99.04
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E68.10
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A55.57
pituitary gland, embryo E15.CNhs10592.427-16B98.87
pituitary gland, embryo E16.CNhs11036.449-43F67.67
pituitary gland, embryo E17.CNhs11039.1265-44F59.05
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I76.81
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F86.62
skin, adult.CNhs10492.30-1C35.28
skin, neonate N00.CNhs11124.650-25G415.34
skin, neonate N03.CNhs11215.662-22H311.52
skin, neonate N06.CNhs11097.693-20I59.31
skin, neonate N10.CNhs11108.762-6C47.55
small intestine, neonate N16.CNhs11114.790-21I15.25
spinal cord, adult.CNhs10505.24-13C96.30
spleen, adult.CNhs10465.25-2G28.71
spleen, embryo E16.CNhs11035.461-43C18.87
spleen, embryo E18.CNhs11011.1271-21F211.30
spleen, neonate N10.CNhs11116.752-24D17.72
spleen, neonate N20.CNhs11112.824-19H16.83
spleen, neonate N25.CNhs11099.1354-25G38.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C615.13
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.30
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E39.02
stomach, embryo E15.CNhs10603.1252-16G810.57
stomach, embryo E16.CNhs11022.459-17D48.32
stomach, embryo E17.CNhs11006.1035-18D57.11
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B85.12
stomach, neonate N07.CNhs11210.718-18A96.86
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I14.28
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F58.22
testis, embryo E15.CNhs11034.443-27C55.79
testis, embryo E16.CNhs11033.470-26G58.75
testis, embryo E17.CNhs11029.486-18I56.72
testis, embryo E18.CNhs11027.503-18G58.28
testis, neonate N00.CNhs11189.1300-22B714.20
testis, neonate N07.CNhs11222.726-26I47.03
testis, neonate N10.CNhs11204.763-44D94.72
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B512.32
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I27.50
thymus, embryo E16.CNhs11002.456-26C510.13
thymus, embryo E17.CNhs10581.478-18C112.17
thymus, embryo E18.CNhs10595.1273-19G47.35
thymus, neonate N02.CNhs11181.1541-43F88.77
thymus, neonate N03.CNhs11137.2104-43C711.82
thymus, neonate N06.CNhs11197.681-26C412.62
thymus, neonate N07.CNhs11211.713-19D311.20
thymus, neonate N10.CNhs11194.748-24E410.79
thymus, neonate N20.CNhs11186.820-7A29.75
thymus, neonate N25.CNhs11125.1362-25G710.87
thymus, neonate N30.CNhs11132.1393-42G29.23
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.50
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E46.18
uterus, adult pregnant day19.CNhs10497.590-15F57.13
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I89.86
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H28.88
whole body, embryo E14.5.CNhs10578.420-27D28.75
whole body, embryo E14.CNhs10519.395-14B15.24
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.82
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.53
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.55
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.13
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.04
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B37.72
whole body, neonate N00.CNhs10525.657-19C28.81
whole body, neonate N01.CNhs10576.659-23C68.80
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B46.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primordium1.73e-08134
lung4.25e-0714
respiratory tube4.25e-0714
respiration organ4.25e-0714
pair of lungs4.25e-0714
lung primordium4.25e-0714
lung bud4.25e-0714







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:39503903..39503928,%2B&oldid=2348824"