FFCP PHASE1:Hg19::chr10:100027943..100027958,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!6.72e-25!180;CL:0000057!1.76e-14!75;CL:0000680!1.02e-13!57;CL:0000056!1.02e-13!57;CL:0000355!1.02e-13!57;CL:0000183!1.35e-13!59;CL:0000187!8.15e-13!54;CL:0000192!3.51e-12!42;CL:0000514!3.51e-12!42;CL:0000393!3.03e-10!60;CL:0000211!3.03e-10!60;CL:0000359!3.15e-09!32;CL:0002620!3.93e-08!23;CL:0002334!1.58e-07!12 | |ontology_enrichment_celltype=CL:0000055!6.72e-25!180;CL:0000057!1.76e-14!75;CL:0000680!1.02e-13!57;CL:0000056!1.02e-13!57;CL:0000355!1.02e-13!57;CL:0000183!1.35e-13!59;CL:0000187!8.15e-13!54;CL:0000192!3.51e-12!42;CL:0000514!3.51e-12!42;CL:0000393!3.03e-10!60;CL:0000211!3.03e-10!60;CL:0000359!3.15e-09!32;CL:0002620!3.93e-08!23;CL:0002334!1.58e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000192;5.51e-11;43!CL:0000359;5.71e-10;32!CL:0002334;4.24e-09;12!CL:0002620;1.57e-08;23!CL:0000134;1.91e-07;55!CL:0002320;7.08e-07;188!CL:0000048;9.88e-07;58 | |ontology_enrichment_celltype_v019=CL:0000192;5.51e-11;43!CL:0000359;5.71e-10;32!CL:0002334;4.24e-09;12!CL:0002620;1.57e-08;23!CL:0000134;1.91e-07;55!CL:0002320;7.08e-07;188!CL:0000048;9.88e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.72e-14,43;CL:0000514,2.72e-14,43;CL:0000057,2.97e-14,76;CL:0000680,4.72e-14,58;CL:0000056,4.72e-14,58;CL:0000355,4.72e-14,58;CL:0000187,5.80e-13,55;CL:0000359,1.61e-10,32;CL:0000393,2.63e-10,61;CL:0000211,2.63e-10,61;CL:0002334,4.65e-09,12;CL:0002620,1.65e-08,23;CL:0000048,3.76e-08,427;CL:0000723,1.78e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;5.51e-11;43!CL:0000355;4.49e-07;58 | |ontology_enrichment_development_v019=CL:0000514;5.51e-11;43!CL:0000355;4.49e-07;58 | ||
|ontology_enrichment_disease=DOID:2394!4.92e-08!14 | |ontology_enrichment_disease=DOID:2394!4.92e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.25e-10;14 | |ontology_enrichment_disease_v019=DOID:2394;5.25e-10;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,5.30e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.25e-19!365;UBERON:0004290!6.06e-17!70;UBERON:0005256!6.46e-17!143;UBERON:0000914!5.16e-16!83;UBERON:0002329!5.16e-16!83;UBERON:0003077!5.16e-16!83;UBERON:0003059!5.16e-16!83;UBERON:0007282!5.16e-16!83;UBERON:0009618!5.16e-16!83;UBERON:0007285!5.16e-16!83;UBERON:0002385!6.82e-15!63;UBERON:0001015!6.82e-15!63;UBERON:0000383!6.82e-15!63;UBERON:0001134!1.25e-14!61;UBERON:0002036!1.25e-14!61;UBERON:0003082!1.25e-14!61;UBERON:0000481!1.83e-14!347;UBERON:0002100!1.25e-13!216;UBERON:0000486!1.84e-13!82;UBERON:0000490!1.03e-10!138;UBERON:0003104!1.17e-10!238;UBERON:0009142!1.17e-10!238;UBERON:0000119!5.38e-10!312;UBERON:0000483!6.55e-10!309;UBERON:0004573!1.38e-08!33;UBERON:0004571!1.38e-08!33;UBERON:0001637!3.71e-08!42;UBERON:0003509!3.71e-08!42;UBERON:0004572!3.71e-08!42;UBERON:0000468!5.28e-08!659;UBERON:0000477!1.77e-07!286;UBERON:0000467!2.15e-07!625;UBERON:0000480!3.07e-07!626;UBERON:0003102!3.49e-07!95;UBERON:0003914!7.08e-07!118;UBERON:0002199!7.78e-07!45;UBERON:0002416!7.78e-07!45 | |ontology_enrichment_uberon=UBERON:0000475!3.25e-19!365;UBERON:0004290!6.06e-17!70;UBERON:0005256!6.46e-17!143;UBERON:0000914!5.16e-16!83;UBERON:0002329!5.16e-16!83;UBERON:0003077!5.16e-16!83;UBERON:0003059!5.16e-16!83;UBERON:0007282!5.16e-16!83;UBERON:0009618!5.16e-16!83;UBERON:0007285!5.16e-16!83;UBERON:0002385!6.82e-15!63;UBERON:0001015!6.82e-15!63;UBERON:0000383!6.82e-15!63;UBERON:0001134!1.25e-14!61;UBERON:0002036!1.25e-14!61;UBERON:0003082!1.25e-14!61;UBERON:0000481!1.83e-14!347;UBERON:0002100!1.25e-13!216;UBERON:0000486!1.84e-13!82;UBERON:0000490!1.03e-10!138;UBERON:0003104!1.17e-10!238;UBERON:0009142!1.17e-10!238;UBERON:0000119!5.38e-10!312;UBERON:0000483!6.55e-10!309;UBERON:0004573!1.38e-08!33;UBERON:0004571!1.38e-08!33;UBERON:0001637!3.71e-08!42;UBERON:0003509!3.71e-08!42;UBERON:0004572!3.71e-08!42;UBERON:0000468!5.28e-08!659;UBERON:0000477!1.77e-07!286;UBERON:0000467!2.15e-07!625;UBERON:0000480!3.07e-07!626;UBERON:0003102!3.49e-07!95;UBERON:0003914!7.08e-07!118;UBERON:0002199!7.78e-07!45;UBERON:0002416!7.78e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.44e-09;33!UBERON:0004571;8.44e-09;33!UBERON:0002385;6.41e-07;31!UBERON:0001015;6.41e-07;31!UBERON:0000383;6.41e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0004573;8.44e-09;33!UBERON:0004571;8.44e-09;33!UBERON:0002385;6.41e-07;31!UBERON:0001015;6.41e-07;31!UBERON:0000383;6.41e-07;31 | ||
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| ||
|short_description=p1@LOXL4 | |short_description=p1@LOXL4 | ||
}} | }} |
Revision as of 03:48, 16 November 2012
Short description: | p1@LOXL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOXL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_ENST00000260702, NM_032211, uc001kpa.1_5end |
EntrezGene: | LOXL4 |
HGNC: | 17171 |
UniProt: | Q96JB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.72e-14 | 43 |
smooth muscle myoblast | 2.72e-14 | 43 |
fibroblast | 2.97e-14 | 76 |
muscle precursor cell | 4.72e-14 | 58 |
myoblast | 4.72e-14 | 58 |
multi-potent skeletal muscle stem cell | 4.72e-14 | 58 |
muscle cell | 5.80e-13 | 55 |
vascular associated smooth muscle cell | 1.61e-10 | 32 |
electrically responsive cell | 2.63e-10 | 61 |
electrically active cell | 2.63e-10 | 61 |
preadipocyte | 4.65e-09 | 12 |
skin fibroblast | 1.65e-08 | 23 |
multi fate stem cell | 3.76e-08 | 427 |
somatic stem cell | 1.78e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 1.85e-17 | 122 |
somite | 3.99e-17 | 71 |
presomitic mesoderm | 3.99e-17 | 71 |
presumptive segmental plate | 3.99e-17 | 71 |
dermomyotome | 3.99e-17 | 71 |
trunk paraxial mesoderm | 3.99e-17 | 71 |
paraxial mesoderm | 1.29e-16 | 72 |
presumptive paraxial mesoderm | 1.29e-16 | 72 |
dense mesenchyme tissue | 4.03e-16 | 73 |
epithelial vesicle | 8.35e-16 | 78 |
skeletal muscle tissue | 3.55e-15 | 62 |
striated muscle tissue | 3.55e-15 | 62 |
myotome | 3.55e-15 | 62 |
muscle tissue | 5.50e-15 | 64 |
musculature | 5.50e-15 | 64 |
musculature of body | 5.50e-15 | 64 |
multilaminar epithelium | 2.43e-14 | 83 |
mesenchyme | 2.58e-13 | 160 |
entire embryonic mesenchyme | 2.58e-13 | 160 |
trunk | 1.56e-11 | 199 |
unilaminar epithelium | 1.69e-10 | 148 |
systemic artery | 1.18e-09 | 33 |
systemic arterial system | 1.18e-09 | 33 |
integument | 1.62e-08 | 46 |
integumental system | 1.62e-08 | 46 |
artery | 2.21e-08 | 42 |
arterial blood vessel | 2.21e-08 | 42 |
arterial system | 2.21e-08 | 42 |
skin of body | 5.30e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.30e-10 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.