FFCP PHASE1:Hg19::chr11:394196..394258,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!2.66e-41!254;CL:0002076!7.32e-21!43;CL:0000223!5.63e-19!59;CL:0002251!7.00e-10!21;CL:0002368!2.32e-09!13;CL:0002159!1.85e-08!13;CL:0000082!3.11e-07!19 | |ontology_enrichment_celltype=CL:0000066!2.66e-41!254;CL:0002076!7.32e-21!43;CL:0000223!5.63e-19!59;CL:0002251!7.00e-10!21;CL:0002368!2.32e-09!13;CL:0002159!1.85e-08!13;CL:0000082!3.11e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.04e-19;42!CL:0002251;7.71e-13;20!CL:0002368;4.81e-11;13!CL:0002159;6.46e-09;14!CL:0002202;1.99e-07;9!CL:0002632;1.99e-07;9!CL:0000082;2.85e-07;19 | |ontology_enrichment_celltype_v019=CL:0002076;1.04e-19;42!CL:0002251;7.71e-13;20!CL:0002368;4.81e-11;13!CL:0002159;6.46e-09;14!CL:0002202;1.99e-07;9!CL:0002632;1.99e-07;9!CL:0000082;2.85e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.65e-50,253;CL:0002076,2.61e-26,42;CL:0000223,1.63e-24,58;CL:0002251,7.91e-13,20;CL:0002368,4.92e-11,13;CL:0002159,6.20e-09,14;CL:0002202,2.03e-07,9;CL:0002632,2.03e-07,9;CL:0000082,3.09e-07,19;CL:0000076,4.01e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;6.59e-13;58!UBERON:0008947;1.60e-12;29!UBERON:0006595;1.34e-10;86 | |ontology_enrichment_development_v019=CL:0000223;6.59e-13;58!UBERON:0008947;1.60e-12;29!UBERON:0006595;1.34e-10;86 | ||
|ontology_enrichment_disease=DOID:305!1.38e-35!106;DOID:0050687!6.82e-27!143;DOID:162!6.94e-14!235;DOID:14566!8.23e-13!239;DOID:299!1.31e-10!25;DOID:1749!4.36e-10!14 | |ontology_enrichment_disease=DOID:305!1.38e-35!106;DOID:0050687!6.82e-27!143;DOID:162!6.94e-14!235;DOID:14566!8.23e-13!239;DOID:299!1.31e-10!25;DOID:1749!4.36e-10!14 | ||
|ontology_enrichment_disease_v019=DOID:299;1.11e-12;25!DOID:305;3.67e-12;106!DOID:1749;1.08e-11;14 | |ontology_enrichment_disease_v019=DOID:299;1.11e-12;25!DOID:305;3.67e-12;106!DOID:1749;1.08e-11;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,9.06e-41,106;DOID:0050687,5.56e-29,143;DOID:162,7.22e-17,235;DOID:14566,7.90e-16,239;DOID:299,1.29e-12,25;DOID:1749,9.82e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.89e-33!169;UBERON:0000925!6.89e-33!169;UBERON:0006595!6.89e-33!169;UBERON:0001007!2.75e-25!155;UBERON:0001555!2.75e-25!155;UBERON:0007026!2.75e-25!155;UBERON:0000077!1.94e-22!130;UBERON:0001004!3.25e-22!72;UBERON:0004921!5.78e-22!129;UBERON:0004185!5.78e-22!129;UBERON:0000065!6.61e-18!53;UBERON:0001041!7.04e-17!98;UBERON:0008947!3.30e-15!38;UBERON:0003258!3.30e-15!38;UBERON:0000072!3.08e-14!46;UBERON:0000464!1.08e-13!104;UBERON:0000466!7.02e-12!126;UBERON:0005911!7.32e-12!82;UBERON:0005153!2.77e-11!37;UBERON:0005181!1.58e-09!35;UBERON:0005178!2.27e-09!34;UBERON:0002224!2.27e-09!34;UBERON:0005157!3.77e-09!51;UBERON:0003104!4.82e-09!238;UBERON:0009142!4.82e-09!238;UBERON:0000915!7.59e-09!52;UBERON:0000161!1.07e-08!35;UBERON:0005631!2.12e-08!14;UBERON:0000158!2.12e-08!14;UBERON:0000062!3.86e-08!511;UBERON:0002048!3.86e-08!22;UBERON:0000117!3.86e-08!22;UBERON:0000171!3.86e-08!22;UBERON:0000170!3.86e-08!22;UBERON:0005597!3.86e-08!22;UBERON:0000118!3.86e-08!22;UBERON:0005177!7.51e-08!107;UBERON:0004807!9.71e-08!28;UBERON:0001557!2.27e-07!19;UBERON:0001048!2.39e-07!168;UBERON:0001737!2.39e-07!9;UBERON:0004802!3.11e-07!19;UBERON:0000115!3.11e-07!19;UBERON:0004175!3.18e-07!25;UBERON:0005156!3.66e-07!59;UBERON:0000990!3.66e-07!59;UBERON:0000166!3.87e-07!21;UBERON:0003124!7.24e-07!7 | |ontology_enrichment_uberon=UBERON:0004119!6.89e-33!169;UBERON:0000925!6.89e-33!169;UBERON:0006595!6.89e-33!169;UBERON:0001007!2.75e-25!155;UBERON:0001555!2.75e-25!155;UBERON:0007026!2.75e-25!155;UBERON:0000077!1.94e-22!130;UBERON:0001004!3.25e-22!72;UBERON:0004921!5.78e-22!129;UBERON:0004185!5.78e-22!129;UBERON:0000065!6.61e-18!53;UBERON:0001041!7.04e-17!98;UBERON:0008947!3.30e-15!38;UBERON:0003258!3.30e-15!38;UBERON:0000072!3.08e-14!46;UBERON:0000464!1.08e-13!104;UBERON:0000466!7.02e-12!126;UBERON:0005911!7.32e-12!82;UBERON:0005153!2.77e-11!37;UBERON:0005181!1.58e-09!35;UBERON:0005178!2.27e-09!34;UBERON:0002224!2.27e-09!34;UBERON:0005157!3.77e-09!51;UBERON:0003104!4.82e-09!238;UBERON:0009142!4.82e-09!238;UBERON:0000915!7.59e-09!52;UBERON:0000161!1.07e-08!35;UBERON:0005631!2.12e-08!14;UBERON:0000158!2.12e-08!14;UBERON:0000062!3.86e-08!511;UBERON:0002048!3.86e-08!22;UBERON:0000117!3.86e-08!22;UBERON:0000171!3.86e-08!22;UBERON:0000170!3.86e-08!22;UBERON:0005597!3.86e-08!22;UBERON:0000118!3.86e-08!22;UBERON:0005177!7.51e-08!107;UBERON:0004807!9.71e-08!28;UBERON:0001557!2.27e-07!19;UBERON:0001048!2.39e-07!168;UBERON:0001737!2.39e-07!9;UBERON:0004802!3.11e-07!19;UBERON:0000115!3.11e-07!19;UBERON:0004175!3.18e-07!25;UBERON:0005156!3.66e-07!59;UBERON:0000990!3.66e-07!59;UBERON:0000166!3.87e-07!21;UBERON:0003124!7.24e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000065;8.27e-14;44!UBERON:0000072;3.46e-12;37!UBERON:0001004;2.31e-11;65!UBERON:0004921;3.25e-10;33!UBERON:0004807;1.42e-09;22!UBERON:0005178;2.55e-09;34!UBERON:0002224;2.55e-09;34!UBERON:0005911;2.62e-09;36!UBERON:0005181;1.66e-08;35!UBERON:0001737;1.76e-08;9!UBERON:0001557;1.76e-08;9!UBERON:0002048;2.51e-08;22!UBERON:0000117;2.51e-08;22!UBERON:0000171;2.51e-08;22!UBERON:0000170;2.51e-08;22!UBERON:0000161;2.00e-07;19!UBERON:0000166;2.00e-07;19!UBERON:0001041;2.61e-07;14!UBERON:0004802;2.85e-07;19!UBERON:0000115;2.85e-07;19!UBERON:0001555;4.70e-07;54!UBERON:0004119;6.82e-07;158 | |ontology_enrichment_uberon_v019=UBERON:0000065;8.27e-14;44!UBERON:0000072;3.46e-12;37!UBERON:0001004;2.31e-11;65!UBERON:0004921;3.25e-10;33!UBERON:0004807;1.42e-09;22!UBERON:0005178;2.55e-09;34!UBERON:0002224;2.55e-09;34!UBERON:0005911;2.62e-09;36!UBERON:0005181;1.66e-08;35!UBERON:0001737;1.76e-08;9!UBERON:0001557;1.76e-08;9!UBERON:0002048;2.51e-08;22!UBERON:0000117;2.51e-08;22!UBERON:0000171;2.51e-08;22!UBERON:0000170;2.51e-08;22!UBERON:0000161;2.00e-07;19!UBERON:0000166;2.00e-07;19!UBERON:0001041;2.61e-07;14!UBERON:0004802;2.85e-07;19!UBERON:0000115;2.85e-07;19!UBERON:0001555;4.70e-07;54!UBERON:0004119;6.82e-07;158 | ||
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| ||
|short_description=p1@PKP3 | |short_description=p1@PKP3 | ||
}} | }} |
Revision as of 10:38, 18 November 2012
Short description: | p1@PKP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PKP3_5end |
Coexpression cluster: | C511_Placental_Alveolar_Bronchial_amniotic_Gingival_Corneal_Mammary |
Association with transcript: | 0bp_to_ENST00000331563, ENST00000531857, ENST00000533069, NM_007183, uc001lpc.2_5end |
EntrezGene: | PKP3 |
HGNC: | 9025 |
UniProt: | Q9Y446E9PK71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.65e-50 | 253 |
endo-epithelial cell | 2.61e-26 | 42 |
endodermal cell | 1.63e-24 | 58 |
epithelial cell of alimentary canal | 7.91e-13 | 20 |
respiratory epithelial cell | 4.92e-11 | 13 |
general ecto-epithelial cell | 6.20e-09 | 14 |
epithelial cell of tracheobronchial tree | 2.03e-07 | 9 |
epithelial cell of lower respiratory tract | 2.03e-07 | 9 |
epithelial cell of lung | 3.09e-07 | 19 |
squamous epithelial cell | 4.01e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.06e-41 | 106 |
cell type cancer | 5.56e-29 | 143 |
cancer | 7.22e-17 | 235 |
disease of cellular proliferation | 7.90e-16 | 239 |
adenocarcinoma | 1.29e-12 | 25 |
squamous cell carcinoma | 9.82e-12 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.