FFCP PHASE1:Hg19::chr5:125759280..125759291,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002334;6.52e-17;12!CL:0002580;3.86e-14;3!CL:0002579;7.96e-14;3!CL:0002615;5.87e-13;3!CL:0000136;6.12e-11;13!CL:0002617;1.09e-09;2!CL:0000197;7.65e-07;6!CL:0000098;7.65e-07;6!CL:0002167;7.65e-07;6 | |ontology_enrichment_celltype_v019=CL:0002334;6.52e-17;12!CL:0002580;3.86e-14;3!CL:0002579;7.96e-14;3!CL:0002615;5.87e-13;3!CL:0000136;6.12e-11;13!CL:0002617;1.09e-09;2!CL:0000197;7.65e-07;6!CL:0000098;7.65e-07;6!CL:0002167;7.65e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.24e-17,12;CL:0002580,3.97e-14,3;CL:0002579,6.91e-14,3;CL:0002615,9.82e-13,3;CL:0002617,1.24e-09,2;CL:0000136,2.34e-09,15;CL:0000197,6.09e-07,6;CL:0000098,6.09e-07,6;CL:0002167,6.09e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.11e-16!115;UBERON:0001049!1.75e-14!57;UBERON:0005068!1.75e-14!57;UBERON:0006241!1.75e-14!57;UBERON:0007135!1.75e-14!57;UBERON:0002616!3.43e-13!59;UBERON:0003075!2.05e-11!86;UBERON:0007284!2.05e-11!86;UBERON:0000033!4.91e-11!123;UBERON:0004121!7.08e-11!169;UBERON:0000153!1.18e-10!129;UBERON:0007811!1.18e-10!129;UBERON:0000955!4.14e-10!69;UBERON:0006238!4.14e-10!69;UBERON:0002346!4.38e-10!90;UBERON:0003080!5.16e-10!42;UBERON:0000924!5.29e-10!173;UBERON:0006601!5.29e-10!173;UBERON:0001017!1.23e-09!82;UBERON:0002780!1.55e-09!41;UBERON:0001890!1.55e-09!41;UBERON:0006240!1.55e-09!41;UBERON:0005743!6.27e-09!86;UBERON:0000475!7.15e-09!365;UBERON:0000073!1.40e-07!94;UBERON:0001016!1.40e-07!94;UBERON:0000064!1.51e-07!219;UBERON:0001893!1.86e-07!34;UBERON:0002020!1.94e-07!34;UBERON:0003528!1.94e-07!34;UBERON:0003056!3.52e-07!61;UBERON:0002791!5.08e-07!33 | |ontology_enrichment_uberon=UBERON:0007023!7.11e-16!115;UBERON:0001049!1.75e-14!57;UBERON:0005068!1.75e-14!57;UBERON:0006241!1.75e-14!57;UBERON:0007135!1.75e-14!57;UBERON:0002616!3.43e-13!59;UBERON:0003075!2.05e-11!86;UBERON:0007284!2.05e-11!86;UBERON:0000033!4.91e-11!123;UBERON:0004121!7.08e-11!169;UBERON:0000153!1.18e-10!129;UBERON:0007811!1.18e-10!129;UBERON:0000955!4.14e-10!69;UBERON:0006238!4.14e-10!69;UBERON:0002346!4.38e-10!90;UBERON:0003080!5.16e-10!42;UBERON:0000924!5.29e-10!173;UBERON:0006601!5.29e-10!173;UBERON:0001017!1.23e-09!82;UBERON:0002780!1.55e-09!41;UBERON:0001890!1.55e-09!41;UBERON:0006240!1.55e-09!41;UBERON:0005743!6.27e-09!86;UBERON:0000475!7.15e-09!365;UBERON:0000073!1.40e-07!94;UBERON:0001016!1.40e-07!94;UBERON:0000064!1.51e-07!219;UBERON:0001893!1.86e-07!34;UBERON:0002020!1.94e-07!34;UBERON:0003528!1.94e-07!34;UBERON:0003056!3.52e-07!61;UBERON:0002791!5.08e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.13e-25;6!UBERON:0002358;5.13e-25;6!UBERON:0003684;5.13e-25;6!UBERON:0001178;5.13e-25;6!UBERON:0004457;1.83e-16;9!UBERON:0000042;1.83e-16;9!UBERON:0000310;7.16e-11;10!UBERON:0001443;7.54e-10;11!UBERON:0005162;2.42e-09;2!UBERON:0000122;2.42e-09;2!UBERON:0005406;7.92e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0003688;5.13e-25;6!UBERON:0002358;5.13e-25;6!UBERON:0003684;5.13e-25;6!UBERON:0001178;5.13e-25;6!UBERON:0004457;1.83e-16;9!UBERON:0000042;1.83e-16;9!UBERON:0000310;7.16e-11;10!UBERON:0001443;7.54e-10;11!UBERON:0005162;2.42e-09;2!UBERON:0000122;2.42e-09;2!UBERON:0005406;7.92e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.54e-25,6;UBERON:0002358,7.54e-25,6;UBERON:0003684,7.54e-25,6;UBERON:0001178,7.54e-25,6;UBERON:0004457,4.23e-12,12;UBERON:0000042,4.23e-12,12;UBERON:0000310,7.73e-11,10;UBERON:0001443,8.07e-10,11;UBERON:0005162,1.97e-09,2;UBERON:0000122,1.97e-09,2;UBERON:0005406,3.99e-09,2;UBERON:0001049,1.78e-07,56;UBERON:0005068,1.78e-07,56;UBERON:0006241,1.78e-07,56;UBERON:0007135,1.78e-07,56;UBERON:0003075,2.18e-07,82;UBERON:0007284,2.18e-07,82;UBERON:0002346,6.58e-07,86 | |||
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| ||
|short_description=p12@GRAMD3 | |short_description=p12@GRAMD3 | ||
}} | }} |
Revision as of 01:13, 21 November 2012
Short description: | p12@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_GRAMD3_5end |
Coexpression cluster: | C1274_Preadipocyte_Olfactory_Adipocyte_amniotic_serous_spindle_mesodermal |
Association with transcript: | 116bp_to_ENST00000505720, ENST00000513978, ENST00000514099_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | D6RFH3D6R9P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.24e-17 | 12 |
preadipocyte of the breast | 3.97e-14 | 3 |
omentum preadipocyte | 6.91e-14 | 3 |
adipocyte of omentum tissue | 9.82e-13 | 3 |
adipocyte of breast | 1.24e-09 | 2 |
fat cell | 2.34e-09 | 15 |
receptor cell | 6.09e-07 | 6 |
sensory epithelial cell | 6.09e-07 | 6 |
olfactory epithelial cell | 6.09e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.54e-25 | 6 |
peritoneum | 7.54e-25 | 6 |
abdominal cavity | 7.54e-25 | 6 |
visceral peritoneum | 7.54e-25 | 6 |
cavity lining | 4.23e-12 | 12 |
serous membrane | 4.23e-12 | 12 |
breast | 7.73e-11 | 10 |
chest | 8.07e-10 | 11 |
multi cell component structure | 1.97e-09 | 2 |
neuron projection bundle | 1.97e-09 | 2 |
perirenal fat | 3.99e-09 | 2 |
neural tube | 1.78e-07 | 56 |
neural rod | 1.78e-07 | 56 |
future spinal cord | 1.78e-07 | 56 |
neural keel | 1.78e-07 | 56 |
neural plate | 2.18e-07 | 82 |
presumptive neural plate | 2.18e-07 | 82 |
neurectoderm | 6.58e-07 | 86 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.