FFCP PHASE1:Hg19::chr19:17858547..17858582,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23149 | |EntrezGene=23149 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29002 | |HGNC=29002 | ||
|TSSclassifier=S | |||
|UniProt=O14526,B4E120 | |UniProt=O14526,B4E120 | ||
|association_with_transcript=20bp_to_ENST00000252771,ENST00000389133,NM_001161357,NM_001161358,uc002nhg.3,uc010ebb.2_5end | |association_with_transcript=20bp_to_ENST00000252771,ENST00000389133,NM_001161357,NM_001161358,uc002nhg.3,uc010ebb.2_5end | ||
Revision as of 17:35, 8 July 2013
| Short description: | p1@FCHO1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_FCHO1_5end |
| Coexpression cluster: | C1387_Neutrophils_Eosinophils_Whole_brain_parietal_optic_temporal |
| Association with transcript: | 20bp_to_ENST00000252771, ENST00000389133, NM_001161357, NM_001161358, uc002nhg.3, uc010ebb.2_5end |
| EntrezGene: | FCHO1 |
| HGNC: | 29002 |
| UniProt: | O14526B4E120 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@FCHO1 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 5.30e-51 | 168 |
| leukocyte | 6.92e-50 | 136 |
| hematopoietic cell | 3.03e-48 | 177 |
| hematopoietic oligopotent progenitor cell | 5.24e-47 | 161 |
| hematopoietic multipotent progenitor cell | 5.24e-47 | 161 |
| nongranular leukocyte | 5.04e-45 | 115 |
| hematopoietic lineage restricted progenitor cell | 4.77e-40 | 120 |
| myeloid leukocyte | 1.74e-25 | 72 |
| myeloid cell | 4.48e-23 | 108 |
| common myeloid progenitor | 4.48e-23 | 108 |
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 2.89e-30 | 56 |
| neural rod | 2.89e-30 | 56 |
| future spinal cord | 2.89e-30 | 56 |
| neural keel | 2.89e-30 | 56 |
| regional part of nervous system | 2.14e-28 | 53 |
| regional part of brain | 2.14e-28 | 53 |
| central nervous system | 3.06e-27 | 81 |
| hematopoietic system | 1.82e-26 | 98 |
| blood island | 1.82e-26 | 98 |
| regional part of forebrain | 5.14e-24 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
