FFCP PHASE1:Hg19::chr10:115999180..115999190,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=340706|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24709|TSSclassifier=S|UniProt=Q5GFL6|association_with_transcript=91bp_to_ENST00000298715,ENST00000392982_5end|coexpression_cluster_id=C42|description=CAGE_peak_7_at_VWA2_5end|id=chr10:115999180..115999190,+|ontology_enrichment_celltype=CL:1001319!6.63e-08!1;CL:1000600!6.63e-08!1|ontology_enrichment_celltype_v019=CL:0000047;7.14e-26;2|ontology_enrichment_celltype_v019_2=CL:0000047,1.69e-07,8|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050619!2.04e-08!1;DOID:1357!2.04e-08!1;DOID:8552!4.11e-08!1;DOID:5409!7.11e-08!4|ontology_enrichment_disease_v019=DOID:0050619;3.99e-50;1!DOID:1357;3.99e-50;1!DOID:5409;8.81e-14;4!DOID:0050615;1.83e-13;16!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9|ontology_enrichment_disease_v019_2=DOID:0050619,6.58e-50,1;DOID:1357,6.58e-50,1;DOID:5409,8.82e-14,4;DOID:0050615,1.95e-13,16;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9|ontology_enrichment_uberon=UBERON:0002780!1.62e-11!41;UBERON:0001890!1.62e-11!41;UBERON:0006240!1.62e-11!41;UBERON:0002791!1.78e-11!33;UBERON:0003080!3.24e-11!42;UBERON:0001893!4.07e-11!34;UBERON:0001049!6.79e-10!57;UBERON:0005068!6.79e-10!57;UBERON:0006241!6.79e-10!57;UBERON:0007135!6.79e-10!57;UBERON:0001017!2.79e-09!82;UBERON:0009663!3.07e-09!7;UBERON:0005743!9.26e-09!86;UBERON:0002020!1.32e-08!34;UBERON:0003528!1.32e-08!34;UBERON:0007023!1.34e-08!115;UBERON:0001764!2.04e-08!1;UBERON:0001825!2.04e-08!1;UBERON:0002038!2.71e-08!1;UBERON:0009661!2.71e-08!1;UBERON:0004913!4.71e-08!1;UBERON:0003703!4.71e-08!1;UBERON:0001174!4.71e-08!1;UBERON:0004914!4.71e-08!1;UBERON:0001882!5.05e-08!1;UBERON:0005403!5.05e-08!1;UBERON:0004645!6.63e-08!1;UBERON:0001256!6.63e-08!1;UBERON:0001259!6.63e-08!1;UBERON:0002902!8.12e-08!1;UBERON:0009899!8.12e-08!1;UBERON:0002336!8.69e-08!1;UBERON:0001018!8.69e-08!1;UBERON:0002473!8.69e-08!1;UBERON:0005340!8.69e-08!1;UBERON:0002316!8.69e-08!1;UBERON:0003544!8.69e-08!1;UBERON:0001020!8.69e-08!1;UBERON:0005970!8.69e-08!1;UBERON:0002437!8.69e-08!1;UBERON:0000073!9.57e-08!94;UBERON:0001016!9.57e-08!94;UBERON:0002363!1.06e-07!1;UBERON:0007647!1.06e-07!1;UBERON:0010115!1.06e-07!1;UBERON:0002394!1.10e-07!4;UBERON:0003928!1.10e-07!4;UBERON:0002616!1.22e-07!59;UBERON:0000369!1.39e-07!4;UBERON:0002435!1.39e-07!4;UBERON:0000204!1.39e-07!4;UBERON:0010082!1.39e-07!4;UBERON:0003056!2.39e-07!61;UBERON:0003075!2.42e-07!86;UBERON:0007284!2.42e-07!86;UBERON:0002370!2.68e-07!4;UBERON:0005058!2.68e-07!4;UBERON:0009113!2.68e-07!4;UBERON:0003295!2.68e-07!4;UBERON:0005562!2.68e-07!4;UBERON:0002308!2.76e-07!9;UBERON:0002420!2.76e-07!9;UBERON:0000125!2.76e-07!9;UBERON:0007245!2.76e-07!9;UBERON:0010009!2.76e-07!9;UBERON:0010011!2.76e-07!9;UBERON:0000454!2.76e-07!9;UBERON:0002346!6.15e-07!90;UBERON:0001869!8.28e-07!32|ontology_enrichment_uberon_v019=UBERON:0001764;3.99e-50;1!UBERON:0001825;3.99e-50;1|ontology_enrichment_uberon_v019_2=UBERON:0001764,6.58e-50,1;UBERON:0001825,6.58e-50,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0.781078098613847,0,0.126831620387814,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=340706 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24709 | |||
|TSSclassifier=S | |||
|UniProt=Q5GFL6 | |||
|association_with_transcript=91bp_to_ENST00000298715,ENST00000392982_5end | |||
|coexpression_cluster_id=C42 | |||
|description=CAGE_peak_7_at_VWA2_5end | |||
|id=chr10:115999180..115999190,+ | |||
|ontology_enrichment_celltype=CL:1001319!6.63e-08!1;CL:1000600!6.63e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.14e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.69e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!2.04e-08!1;DOID:1357!2.04e-08!1;DOID:8552!4.11e-08!1;DOID:5409!7.11e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:0050619;3.99e-50;1!DOID:1357;3.99e-50;1!DOID:5409;8.81e-14;4!DOID:0050615;1.83e-13;16!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,6.58e-50,1;DOID:1357,6.58e-50,1;DOID:5409,8.82e-14,4;DOID:0050615,1.95e-13,16;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0002780!1.62e-11!41;UBERON:0001890!1.62e-11!41;UBERON:0006240!1.62e-11!41;UBERON:0002791!1.78e-11!33;UBERON:0003080!3.24e-11!42;UBERON:0001893!4.07e-11!34;UBERON:0001049!6.79e-10!57;UBERON:0005068!6.79e-10!57;UBERON:0006241!6.79e-10!57;UBERON:0007135!6.79e-10!57;UBERON:0001017!2.79e-09!82;UBERON:0009663!3.07e-09!7;UBERON:0005743!9.26e-09!86;UBERON:0002020!1.32e-08!34;UBERON:0003528!1.32e-08!34;UBERON:0007023!1.34e-08!115;UBERON:0001764!2.04e-08!1;UBERON:0001825!2.04e-08!1;UBERON:0002038!2.71e-08!1;UBERON:0009661!2.71e-08!1;UBERON:0004913!4.71e-08!1;UBERON:0003703!4.71e-08!1;UBERON:0001174!4.71e-08!1;UBERON:0004914!4.71e-08!1;UBERON:0001882!5.05e-08!1;UBERON:0005403!5.05e-08!1;UBERON:0004645!6.63e-08!1;UBERON:0001256!6.63e-08!1;UBERON:0001259!6.63e-08!1;UBERON:0002902!8.12e-08!1;UBERON:0009899!8.12e-08!1;UBERON:0002336!8.69e-08!1;UBERON:0001018!8.69e-08!1;UBERON:0002473!8.69e-08!1;UBERON:0005340!8.69e-08!1;UBERON:0002316!8.69e-08!1;UBERON:0003544!8.69e-08!1;UBERON:0001020!8.69e-08!1;UBERON:0005970!8.69e-08!1;UBERON:0002437!8.69e-08!1;UBERON:0000073!9.57e-08!94;UBERON:0001016!9.57e-08!94;UBERON:0002363!1.06e-07!1;UBERON:0007647!1.06e-07!1;UBERON:0010115!1.06e-07!1;UBERON:0002394!1.10e-07!4;UBERON:0003928!1.10e-07!4;UBERON:0002616!1.22e-07!59;UBERON:0000369!1.39e-07!4;UBERON:0002435!1.39e-07!4;UBERON:0000204!1.39e-07!4;UBERON:0010082!1.39e-07!4;UBERON:0003056!2.39e-07!61;UBERON:0003075!2.42e-07!86;UBERON:0007284!2.42e-07!86;UBERON:0002370!2.68e-07!4;UBERON:0005058!2.68e-07!4;UBERON:0009113!2.68e-07!4;UBERON:0003295!2.68e-07!4;UBERON:0005562!2.68e-07!4;UBERON:0002308!2.76e-07!9;UBERON:0002420!2.76e-07!9;UBERON:0000125!2.76e-07!9;UBERON:0007245!2.76e-07!9;UBERON:0010009!2.76e-07!9;UBERON:0010011!2.76e-07!9;UBERON:0000454!2.76e-07!9;UBERON:0002346!6.15e-07!90;UBERON:0001869!8.28e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;3.99e-50;1!UBERON:0001825;3.99e-50;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,6.58e-50,1;UBERON:0001825,6.58e-50,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0.781078098613847,0,0.126831620387814,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39265542612958,0,4.29195111748048,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@VWA2 | |||
}} |
Revision as of 11:51, 10 September 2013
Short description: | p7@VWA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_VWA2_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | 91bp_to_ENST00000298715, ENST00000392982_5end |
EntrezGene: | VWA2 |
HGNC: | 24709 |
UniProt: | Q5GFL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 6.58e-50 | 1 |
paranasal sinus | 6.58e-50 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 6.58e-50 | 1 |
maxillary sinus cancer | 6.58e-50 | 1 |
lung small cell carcinoma | 8.82e-14 | 4 |
respiratory system cancer | 1.95e-13 | 16 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |
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