FFCP PHASE1:Hg19::chr11:65321727..65321741,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4054|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6716|TSSclassifier=S|UniProt=|association_with_transcript=-116bp_to_ENST00000524798_5end|description=CAGE_peak_10_at_LTBP3_5end|id=chr11:65321727..65321741,-|ontology_enrichment_celltype=CL:0000057!3.75e-08!75|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!1.59e-12!365;UBERON:0000481!9.50e-11!347;UBERON:0000477!4.78e-10!286;UBERON:0000119!9.31e-10!312;UBERON:0000483!2.89e-09!309;UBERON:0004111!1.23e-08!241;UBERON:0002346!2.20e-08!90;UBERON:0003075!3.00e-08!86;UBERON:0007284!3.00e-08!86;UBERON:0000025!7.09e-07!194|ontology_enrichment_uberon_v019=UBERON:0004905;3.20e-09;8!UBERON:0000982;3.20e-09;8!UBERON:0004770;3.20e-09;8!UBERON:0011135;7.42e-08;5!UBERON:0002216;7.42e-08;5!UBERON:0011134;7.42e-08;5!UBERON:0002209;7.42e-08;5!UBERON:0002213;7.42e-08;5!UBERON:0007844;7.42e-08;5!UBERON:0011138;7.42e-08;5!UBERON:0001130;7.42e-08;5!UBERON:0001066;7.42e-08;5!UBERON:0001468;7.42e-08;5!UBERON:0000020;1.27e-07;23!UBERON:0007625;1.45e-07;11!UBERON:0001032;3.60e-07;24!UBERON:0004456;3.60e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0004905,7.54e-09,8;UBERON:0000982,7.54e-09,8;UBERON:0004770,7.54e-09,8;UBERON:0007625,7.91e-08,11;UBERON:0011135,1.87e-07,5;UBERON:0002216,1.87e-07,5;UBERON:0011134,1.87e-07,5;UBERON:0002209,1.87e-07,5;UBERON:0002213,1.87e-07,5;UBERON:0005856,1.87e-07,5;UBERON:0005866,1.87e-07,5;UBERON:0005863,1.87e-07,5;UBERON:0007844,1.87e-07,5;UBERON:0011138,1.87e-07,5;UBERON:0001130,1.87e-07,5;UBERON:0001066,1.87e-07,5;UBERON:0001468,1.87e-07,5;UBERON:0000020,6.21e-07,24;UBERON:0001032,6.21e-07,24;UBERON:0004456,6.21e-07,24|phase1_expression=1.2717486548939,2.35510576280081,0.563817616383885,1.0007329835313,2.23480547213644,2.61701557230111,0,0,1.30592814099919,0.491467873003018,0,0,0.263766978228454,1.11389717664042,2.65117900582333,0,0,2.19093027116212,0.487932798790507,0.861847406537515,2.24400760368678,3.13454721478088,0.286235987131057,1.23186982565596,2.00868223351684,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,1.17903228824749,0.822405995998037,0,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0,0,0.130059347559878,0,0,0,0.444859689486181,0.267540828089713,2.09071047609954,0.226618685395132,0,0,0,0.318565414324097,0,0,0.301150238155546,0.511946444617674,0,0.236777252044017,0.821127996921047,0.403213486449465,1.60464117470104,1.15859523106239,0,0.670700859703636,0.511450247374121,0,1.00267582127178,4.05570253090306,0,1.94653948121054,1.22895262313288,4.87804674417641,3.86473057049755,0.392937226493138,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0.694281003215189,0,1.25849830862972,0.825354125820202,0.208994966536811,0.516833518338658,0,0,1.61131726843659,0.760272105718513,0.976248230192678,0.367663080345869,1.62028389576352,0.446498641420399,0,0,0,0,0.366403487860815,0,0,0,0.993943903390637,1.01304409331664,0.397227542439656,5.16305917347865,0.709336764396714,1.68203280042692,1.06748995729705,3.7000132262574,0,0.269421344139376,0.326923806226917,0.454072282934794,0.576175924479999,0.234321431833797,1.24864030732128,0.570471821544449,0.896692083310806,0.117434498643765,0.323745888736263,0.140450806702248,0.204154171254893,0,1.13658359293342,1.18800285728205,0.989067717114227,0,2.87447256726495,0,0.750711119231785,0.277064115484183,0,1.22595118319608,1.20190447125277,0.113432183160021,0.538168907066586,0.427114777637135,0.847727604638247,1.50045548042201,0.206105058476878,1.03056216018252,0.37223371266318,1.0126579934476,0.487185025805993,1.00973509697646,0.276149695926898,1.13152239773168,0.355009592516614,0.302256294682921,0.169560592310488,0,0,0,0,0,0.232387885739037,0,0,0,0,2.57296375277154,0,2.78620756819187,1.44375896333917,0,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0,0.245976877086227,1.54411029268673,0.109750285408626,0,0.100528972411631,0.462942225792648,0,1.03993478527958,2.88662684050547,0.927443239800615,1.52631302506568,0.577465791044295,0.462985512576611,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0.383382679165211,0.985326475791887,0.088048434013226,0,0.144119953416961,0.12624243342638,0.126995788584338,0,0,0,0.719792448923265,0,0.571652865261156,0.336393253036082,3.05172048183296,0.5867062865676,0.904902010304444,0,0.845302752556,0.531876233169741,1.04007436911366,0,0,1.3321108950805,0.857867961948885,1.08524321078289,0,0,0.355391948742546,0,1.20575750823834,0,2.99918973546171,0,0,0,0.958499421966331,1.14861935834114,0,0.144781306667579,3.90405012845728,0.358121926479791,0,0,0.215627574859517,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4054 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6716 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-116bp_to_ENST00000524798_5end | |||
|description=CAGE_peak_10_at_LTBP3_5end | |||
|id=chr11:65321727..65321741,- | |||
|ontology_enrichment_celltype=CL:0000057!3.75e-08!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.59e-12!365;UBERON:0000481!9.50e-11!347;UBERON:0000477!4.78e-10!286;UBERON:0000119!9.31e-10!312;UBERON:0000483!2.89e-09!309;UBERON:0004111!1.23e-08!241;UBERON:0002346!2.20e-08!90;UBERON:0003075!3.00e-08!86;UBERON:0007284!3.00e-08!86;UBERON:0000025!7.09e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;3.20e-09;8!UBERON:0000982;3.20e-09;8!UBERON:0004770;3.20e-09;8!UBERON:0011135;7.42e-08;5!UBERON:0002216;7.42e-08;5!UBERON:0011134;7.42e-08;5!UBERON:0002209;7.42e-08;5!UBERON:0002213;7.42e-08;5!UBERON:0007844;7.42e-08;5!UBERON:0011138;7.42e-08;5!UBERON:0001130;7.42e-08;5!UBERON:0001066;7.42e-08;5!UBERON:0001468;7.42e-08;5!UBERON:0000020;1.27e-07;23!UBERON:0007625;1.45e-07;11!UBERON:0001032;3.60e-07;24!UBERON:0004456;3.60e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,7.54e-09,8;UBERON:0000982,7.54e-09,8;UBERON:0004770,7.54e-09,8;UBERON:0007625,7.91e-08,11;UBERON:0011135,1.87e-07,5;UBERON:0002216,1.87e-07,5;UBERON:0011134,1.87e-07,5;UBERON:0002209,1.87e-07,5;UBERON:0002213,1.87e-07,5;UBERON:0005856,1.87e-07,5;UBERON:0005866,1.87e-07,5;UBERON:0005863,1.87e-07,5;UBERON:0007844,1.87e-07,5;UBERON:0011138,1.87e-07,5;UBERON:0001130,1.87e-07,5;UBERON:0001066,1.87e-07,5;UBERON:0001468,1.87e-07,5;UBERON:0000020,6.21e-07,24;UBERON:0001032,6.21e-07,24;UBERON:0004456,6.21e-07,24 | |||
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| |||
|short_description=p10@LTBP3 | |||
}} |
Revision as of 18:58, 10 September 2013
Short description: | p10@LTBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_LTBP3_5end |
Coexpression cluster: | NA |
Association with transcript: | -116bp_to_ENST00000524798_5end |
EntrezGene: | LTBP3 |
HGNC: | 6716 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
articulation | 7.54e-09 | 8 |
skeletal joint | 7.54e-09 | 8 |
articular system | 7.54e-09 | 8 |
pigment epithelium of eye | 7.91e-08 | 11 |
intervertebral cartilage | 1.87e-07 | 5 |
symphysis | 1.87e-07 | 5 |
nonsynovial joint | 1.87e-07 | 5 |
fibrous joint | 1.87e-07 | 5 |
cartilaginous joint | 1.87e-07 | 5 |
developing mesenchymal condensation | 1.87e-07 | 5 |
pre-cartilage condensation | 1.87e-07 | 5 |
cartilaginous condensation | 1.87e-07 | 5 |
cartilage element | 1.87e-07 | 5 |
post-cranial axial skeletal system | 1.87e-07 | 5 |
vertebral column | 1.87e-07 | 5 |
intervertebral disk | 1.87e-07 | 5 |
intervertebral joint | 1.87e-07 | 5 |
sense organ | 6.21e-07 | 24 |
sensory system | 6.21e-07 | 24 |
entire sense organ system | 6.21e-07 | 24 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.