FFCP PHASE1:Hg19::chr11:76381029..76381041,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2615|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4161|TSSclassifier=S|UniProt=Q14392,C9JYU3|association_with_transcript=2bp_to_ENST00000407242,ENST00000421973,NM_005512,uc001oxq.3,uc010rsf.1_5end|coexpression_cluster_id=C2167|description=CAGE_peak_6_at_LRRC32_5end|id=chr11:76381029..76381041,-|ontology_enrichment_celltype=CL:0002334!8.46e-11!12;CL:0000057!1.20e-09!75;CL:0000136!1.70e-08!15;CL:0000055!2.71e-08!180;CL:0002570!1.08e-07!8;CL:0005020!3.01e-07!6;CL:0002138!3.01e-07!6;CL:0005022!3.01e-07!6|ontology_enrichment_celltype_v019=CL:0002334;2.55e-27;12!CL:0002580;5.05e-17;3!CL:0002579;1.13e-16;3!CL:0002569;2.50e-14;6!CL:0000349;1.96e-09;19!CL:0000134;1.53e-08;55!CL:0002615;6.94e-08;3!CL:0002582;6.94e-08;3|ontology_enrichment_celltype_v019_2=CL:0002334,3.42e-27,12;CL:0002580,3.20e-17,3;CL:0002579,1.23e-16,3;CL:0002569,2.89e-14,6;CL:0000349,2.09e-09,19;CL:0002615,9.19e-08,3;CL:0000057,1.13e-07,76;CL:0002582,1.17e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003688!8.83e-09!6;UBERON:0002358!8.83e-09!6;UBERON:0003684!8.83e-09!6;UBERON:0001178!8.83e-09!6;UBERON:0001009!1.38e-07!113;UBERON:0004535!1.48e-07!110;UBERON:0001473!4.77e-07!8;UBERON:0004536!4.77e-07!8;UBERON:0006558!4.77e-07!8;UBERON:0002049!4.95e-07!79;UBERON:0007798!4.95e-07!79;UBERON:0002465!5.60e-07!10;UBERON:0004872!7.72e-07!84|ontology_enrichment_uberon_v019=UBERON:0003688;6.73e-22;6!UBERON:0002358;6.73e-22;6!UBERON:0003684;6.73e-22;6!UBERON:0001178;6.73e-22;6!UBERON:0004457;1.53e-14;9!UBERON:0000042;1.53e-14;9!UBERON:0003422;2.50e-14;6!UBERON:0003104;2.66e-12;7!UBERON:0009142;2.66e-12;7!UBERON:0000310;8.22e-09;10!UBERON:0002331;1.21e-08;10!UBERON:0001443;5.13e-08;11!UBERON:0000478;2.39e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.03e-21,6;UBERON:0002358,1.03e-21,6;UBERON:0003684,1.03e-21,6;UBERON:0001178,1.03e-21,6;UBERON:0003422,2.89e-14,6;UBERON:0004457,9.23e-11,12;UBERON:0000042,9.23e-11,12;UBERON:0000310,6.85e-09,10;UBERON:0002331,1.32e-08,10;UBERON:0000358,1.32e-08,10;UBERON:0000307,1.32e-08,10;UBERON:0000091,1.32e-08,10;UBERON:0000087,1.32e-08,10;UBERON:0007010,1.32e-08,10;UBERON:0007806,1.32e-08,10;UBERON:0008780,1.32e-08,10;UBERON:0005728,1.32e-08,10;UBERON:0001443,4.35e-08,11;UBERON:0000478,2.51e-07,24|phase1_expression=1.2717486548939,0.428201047781966,1.40954404095971,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0.994192127183747,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0,0.258416759169329,0.71153252537342,0.66944122552934,0,0,0,0,0.81014194788176,0,0,0.563057402416611,0,2.84779697870439,0,0,0,0,0.993943903390637,0.25326102332916,0.794455084879313,0.860509862246441,0,1.12135520028461,0,0.49333509683432,0.311211035399766,0.404132016209064,0.163461903113459,1.05950199351452,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0,0.206105058476878,0,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.184099797284599,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0.721832238805369,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.07333828582095,1.29271715757778,7.15312891703765,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0.428933980974443,1.08524321078289,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,2.63587341040741,1.14861935834114,0,1.01346914667305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.415941723061614,0,0.315404830067869,0,0.300946099727719,4.5481500811197,0,0,0,0.0868836144680828,0.979005787313703,0.343143423810856,0,0,0,0,0,0.30239029332968,3.47350930946288,1.84154367945675,2.24528075546459,3.58789617915963,1.02341449813341,1.44768529029247,0,0,0.710246901252508,0.98552587216571,1.03850885836724,1.04589340613963,0,0,0,0,0,0.393373244878272,0,0,0,0,0,6.8240030442538,0.510281115829547,0.215915916102139,6.16909010761157,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.178064071293475,0,0,0,0,0,3.46293581513704,0.6970372701606,0,0.532306030317022,0,0,0,0.372158369359667,1.89827654831236,0.762520775695299,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2615 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4161 | |||
|TSSclassifier=S | |||
|UniProt=Q14392,C9JYU3 | |||
|association_with_transcript=2bp_to_ENST00000407242,ENST00000421973,NM_005512,uc001oxq.3,uc010rsf.1_5end | |||
|coexpression_cluster_id=C2167 | |||
|description=CAGE_peak_6_at_LRRC32_5end | |||
|id=chr11:76381029..76381041,- | |||
|ontology_enrichment_celltype=CL:0002334!8.46e-11!12;CL:0000057!1.20e-09!75;CL:0000136!1.70e-08!15;CL:0000055!2.71e-08!180;CL:0002570!1.08e-07!8;CL:0005020!3.01e-07!6;CL:0002138!3.01e-07!6;CL:0005022!3.01e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.55e-27;12!CL:0002580;5.05e-17;3!CL:0002579;1.13e-16;3!CL:0002569;2.50e-14;6!CL:0000349;1.96e-09;19!CL:0000134;1.53e-08;55!CL:0002615;6.94e-08;3!CL:0002582;6.94e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.42e-27,12;CL:0002580,3.20e-17,3;CL:0002579,1.23e-16,3;CL:0002569,2.89e-14,6;CL:0000349,2.09e-09,19;CL:0002615,9.19e-08,3;CL:0000057,1.13e-07,76;CL:0002582,1.17e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!8.83e-09!6;UBERON:0002358!8.83e-09!6;UBERON:0003684!8.83e-09!6;UBERON:0001178!8.83e-09!6;UBERON:0001009!1.38e-07!113;UBERON:0004535!1.48e-07!110;UBERON:0001473!4.77e-07!8;UBERON:0004536!4.77e-07!8;UBERON:0006558!4.77e-07!8;UBERON:0002049!4.95e-07!79;UBERON:0007798!4.95e-07!79;UBERON:0002465!5.60e-07!10;UBERON:0004872!7.72e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.73e-22;6!UBERON:0002358;6.73e-22;6!UBERON:0003684;6.73e-22;6!UBERON:0001178;6.73e-22;6!UBERON:0004457;1.53e-14;9!UBERON:0000042;1.53e-14;9!UBERON:0003422;2.50e-14;6!UBERON:0003104;2.66e-12;7!UBERON:0009142;2.66e-12;7!UBERON:0000310;8.22e-09;10!UBERON:0002331;1.21e-08;10!UBERON:0001443;5.13e-08;11!UBERON:0000478;2.39e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.03e-21,6;UBERON:0002358,1.03e-21,6;UBERON:0003684,1.03e-21,6;UBERON:0001178,1.03e-21,6;UBERON:0003422,2.89e-14,6;UBERON:0004457,9.23e-11,12;UBERON:0000042,9.23e-11,12;UBERON:0000310,6.85e-09,10;UBERON:0002331,1.32e-08,10;UBERON:0000358,1.32e-08,10;UBERON:0000307,1.32e-08,10;UBERON:0000091,1.32e-08,10;UBERON:0000087,1.32e-08,10;UBERON:0007010,1.32e-08,10;UBERON:0007806,1.32e-08,10;UBERON:0008780,1.32e-08,10;UBERON:0005728,1.32e-08,10;UBERON:0001443,4.35e-08,11;UBERON:0000478,2.51e-07,24 | |||
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|short_description=p6@LRRC32 | |||
}} |
Revision as of 19:45, 10 September 2013
Short description: | p6@LRRC32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LRRC32_5end |
Coexpression cluster: | C2167_Mesenchymal_Renal_Preadipocyte_tenocyte_Adipocyte_mesenchymal_Multipotent |
Association with transcript: | 2bp_to_ENST00000407242, ENST00000421973, NM_005512, uc001oxq.3, uc010rsf.1_5end |
EntrezGene: | LRRC32 |
HGNC: | 4161 |
UniProt: | Q14392C9JYU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.42e-27 | 12 |
preadipocyte of the breast | 3.20e-17 | 3 |
omentum preadipocyte | 1.23e-16 | 3 |
mesenchymal stem cell of umbilical cord | 2.89e-14 | 6 |
extraembryonic cell | 2.09e-09 | 19 |
adipocyte of omentum tissue | 9.19e-08 | 3 |
fibroblast | 1.13e-07 | 76 |
visceral preadipocyte | 1.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.03e-21 | 6 |
peritoneum | 1.03e-21 | 6 |
abdominal cavity | 1.03e-21 | 6 |
visceral peritoneum | 1.03e-21 | 6 |
mesenchyme of umbilical cord | 2.89e-14 | 6 |
cavity lining | 9.23e-11 | 12 |
serous membrane | 9.23e-11 | 12 |
breast | 6.85e-09 | 10 |
umbilical cord | 1.32e-08 | 10 |
blastocyst | 1.32e-08 | 10 |
blastula | 1.32e-08 | 10 |
bilaminar disc | 1.32e-08 | 10 |
inner cell mass | 1.32e-08 | 10 |
cleaving embryo | 1.32e-08 | 10 |
connecting stalk | 1.32e-08 | 10 |
inner cell mass derived epiblast | 1.32e-08 | 10 |
extraembryonic mesoderm | 1.32e-08 | 10 |
chest | 4.35e-08 | 11 |
extraembryonic structure | 2.51e-07 | 24 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.