FFCP PHASE1:Hg19::chr12:104323304..104323327,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C75|description=CAGE_peak_at_chr12:104323304..104323327,+|id=chr12:104323304..104323327,+|ontology_enrichment_celltype=CL:0000738!1.61e-27!140;CL:0000037!2.58e-20!172;CL:0000566!2.58e-20!172;CL:0002031!8.79e-20!124;CL:0000988!4.29e-19!182;CL:0000542!1.54e-17!53;CL:0000051!1.54e-17!53;CL:0002087!1.88e-17!119;CL:0000838!1.32e-16!52;CL:0002032!7.21e-16!165;CL:0000837!7.21e-16!165;CL:0000624!2.24e-11!6;CL:0000084!2.03e-09!25;CL:0000827!2.03e-09!25;CL:0000219!2.42e-09!390;CL:0002274!3.03e-09!5;CL:0000457!3.03e-09!5;CL:0002191!3.03e-09!5;CL:0000097!3.03e-09!5;CL:0000831!3.03e-09!5;CL:0002028!3.03e-09!5;CL:0000134!4.64e-09!358;CL:0002320!5.60e-09!365;CL:0000791!1.34e-08!18;CL:0000789!1.34e-08!18;CL:0002420!1.34e-08!18;CL:0002419!1.34e-08!18;CL:0000790!1.34e-08!18;CL:0000034!2.41e-08!444;CL:0000048!2.09e-07!430;CL:0000623!3.35e-07!3;CL:0000825!3.35e-07!3;CL:0000766!4.56e-07!76;CL:0000723!4.84e-07!436;CL:0000767!6.06e-07!3;CL:0002393!8.21e-07!9;CL:0002397!8.21e-07!9|ontology_enrichment_celltype_v019=CL:0000623;4.95e-24;3!CL:0000767;7.59e-23;3!CL:0000094;3.58e-15;8!CL:0000097;8.31e-14;5!CL:0002393;1.87e-11;6!CL:0002397;1.87e-11;6!CL:0000081;4.39e-11;11!CL:0000784;5.54e-11;3!CL:0000037;6.90e-09;1!CL:0001024;6.90e-09;1!CL:0000163;6.77e-08;9|ontology_enrichment_celltype_v019_2=CL:0000623,5.36e-24,3;CL:0000825,5.36e-24,3;CL:0000767,5.64e-23,3;CL:0000738,2.31e-22,136;CL:0000037,2.78e-19,168;CL:0000988,4.21e-18,177;CL:0002032,2.11e-16,161;CL:0000837,2.11e-16,161;CL:0000094,3.09e-15,8;CL:0002031,1.77e-14,120;CL:0000097,1.16e-13,5;CL:0002028,1.16e-13,5;CL:0000766,2.70e-12,72;CL:0000081,3.95e-11,11;CL:0000784,6.95e-11,3;CL:0000763,5.26e-09,108;CL:0000049,5.26e-09,108;CL:0001024,7.75e-09,1;CL:0002087,1.91e-08,115;CL:0000838,3.25e-08,52;CL:0000542,4.88e-08,53;CL:0000051,4.88e-08,53;CL:0002393,6.54e-08,9;CL:0002397,6.54e-08,9;CL:0000163,8.10e-08,9;CL:0000557,2.51e-07,67;CL:0000134,5.36e-07,354;CL:0002320,8.85e-07,361|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!3.00e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.41e-08,76;UBERON:0001474,3.56e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0,0.157421562627358,4.32700704533794,1.91914699048606,1.39334510984468,0,0,0,0.0774672005803016,0,2.05520307534393,1.66198622559563,1.60435557976113,1.73608696572681,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,1.35426486594342,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0.434377689410233,0,0,0,0.422510572623884,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0.889509253863555,0,0.400395987036012,0.574752439954483,0,0.954053754535364,0,4.69789751496751,1.52909291250092,3.96513985737078,2.80254281490768,0,0.786839080455332,1.57204305099666,0.616804496998528,0,0.977766799900771,0.473447805734733,0,0.222820913770347,0.883817722424512,0,0,0.128091319725675,0.130059347559878,0,0,0,0.444859689486181,0.267540828089713,1.04535523804977,0,0.766440987203842,0.34362744548263,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,2.13952156626806,1.73789284659359,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,1.43094374583205,4.0039643754609,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,3.9534125230819,0,0,0,0,0,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,1.03664057770386,1.44119953416961,2.77733353538036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13764596424047,4.31255149719035,6.67383788654692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0.360299883542404,0,0.157566364614447,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,0.899895566206002,3.0952078182318,0,0,0.0788057072991982,0,0.316801009558219,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:104323304..104323327,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C75 | |||
|description=CAGE_peak_at_chr12:104323304..104323327,+ | |||
|id=chr12:104323304..104323327,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.61e-27!140;CL:0000037!2.58e-20!172;CL:0000566!2.58e-20!172;CL:0002031!8.79e-20!124;CL:0000988!4.29e-19!182;CL:0000542!1.54e-17!53;CL:0000051!1.54e-17!53;CL:0002087!1.88e-17!119;CL:0000838!1.32e-16!52;CL:0002032!7.21e-16!165;CL:0000837!7.21e-16!165;CL:0000624!2.24e-11!6;CL:0000084!2.03e-09!25;CL:0000827!2.03e-09!25;CL:0000219!2.42e-09!390;CL:0002274!3.03e-09!5;CL:0000457!3.03e-09!5;CL:0002191!3.03e-09!5;CL:0000097!3.03e-09!5;CL:0000831!3.03e-09!5;CL:0002028!3.03e-09!5;CL:0000134!4.64e-09!358;CL:0002320!5.60e-09!365;CL:0000791!1.34e-08!18;CL:0000789!1.34e-08!18;CL:0002420!1.34e-08!18;CL:0002419!1.34e-08!18;CL:0000790!1.34e-08!18;CL:0000034!2.41e-08!444;CL:0000048!2.09e-07!430;CL:0000623!3.35e-07!3;CL:0000825!3.35e-07!3;CL:0000766!4.56e-07!76;CL:0000723!4.84e-07!436;CL:0000767!6.06e-07!3;CL:0002393!8.21e-07!9;CL:0002397!8.21e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000623;4.95e-24;3!CL:0000767;7.59e-23;3!CL:0000094;3.58e-15;8!CL:0000097;8.31e-14;5!CL:0002393;1.87e-11;6!CL:0002397;1.87e-11;6!CL:0000081;4.39e-11;11!CL:0000784;5.54e-11;3!CL:0000037;6.90e-09;1!CL:0001024;6.90e-09;1!CL:0000163;6.77e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,5.36e-24,3;CL:0000825,5.36e-24,3;CL:0000767,5.64e-23,3;CL:0000738,2.31e-22,136;CL:0000037,2.78e-19,168;CL:0000988,4.21e-18,177;CL:0002032,2.11e-16,161;CL:0000837,2.11e-16,161;CL:0000094,3.09e-15,8;CL:0002031,1.77e-14,120;CL:0000097,1.16e-13,5;CL:0002028,1.16e-13,5;CL:0000766,2.70e-12,72;CL:0000081,3.95e-11,11;CL:0000784,6.95e-11,3;CL:0000763,5.26e-09,108;CL:0000049,5.26e-09,108;CL:0001024,7.75e-09,1;CL:0002087,1.91e-08,115;CL:0000838,3.25e-08,52;CL:0000542,4.88e-08,53;CL:0000051,4.88e-08,53;CL:0002393,6.54e-08,9;CL:0002397,6.54e-08,9;CL:0000163,8.10e-08,9;CL:0000557,2.51e-07,67;CL:0000134,5.36e-07,354;CL:0002320,8.85e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.00e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.41e-08,76;UBERON:0001474,3.56e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0,0.157421562627358,4.32700704533794,1.91914699048606,1.39334510984468,0,0,0,0.0774672005803016,0,2.05520307534393,1.66198622559563,1.60435557976113,1.73608696572681,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,1.35426486594342,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0.434377689410233,0,0,0,0.422510572623884,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0,0.889509253863555,0,0.400395987036012,0.574752439954483,0,0.954053754535364,0,4.69789751496751,1.52909291250092,3.96513985737078,2.80254281490768,0,0.786839080455332,1.57204305099666,0.616804496998528,0,0.977766799900771,0.473447805734733,0,0.222820913770347,0.883817722424512,0,0,0.128091319725675,0.130059347559878,0,0,0,0.444859689486181,0.267540828089713,1.04535523804977,0,0.766440987203842,0.34362744548263,0.506039384039006,0,0,0,0,0.127986611154418,0,0,0,0.80642697289893,2.13952156626806,1.73789284659359,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,1.43094374583205,4.0039643754609,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,3.9534125230819,0,0,0,0,0,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,1.03664057770386,1.44119953416961,2.77733353538036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13764596424047,4.31255149719035,6.67383788654692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0.360299883542404,0,0.157566364614447,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0,0.899895566206002,3.0952078182318,0,0,0.0788057072991982,0,0.316801009558219,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:104323304..104323327,+ | |||
}} |
Revision as of 20:31, 10 September 2013
Short description: | p@chr12:104323304..104323327, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:104323304..104323327, + |
Coexpression cluster: | C75_Eosinophils_Natural_CD8_Basophils_CD14_CD4_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 5.36e-24 | 3 |
pro-NK cell | 5.36e-24 | 3 |
basophil | 5.64e-23 | 3 |
leukocyte | 2.31e-22 | 136 |
hematopoietic stem cell | 2.78e-19 | 168 |
hematopoietic cell | 4.21e-18 | 177 |
hematopoietic oligopotent progenitor cell | 2.11e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.11e-16 | 161 |
granulocyte | 3.09e-15 | 8 |
hematopoietic lineage restricted progenitor cell | 1.77e-14 | 120 |
mast cell | 1.16e-13 | 5 |
basophil mast progenitor cell | 1.16e-13 | 5 |
myeloid leukocyte | 2.70e-12 | 72 |
blood cell | 3.95e-11 | 11 |
plasmacytoid dendritic cell | 6.95e-11 | 3 |
myeloid cell | 5.26e-09 | 108 |
common myeloid progenitor | 5.26e-09 | 108 |
CD34-positive, CD38-negative hematopoietic stem cell | 7.75e-09 | 1 |
nongranular leukocyte | 1.91e-08 | 115 |
lymphoid lineage restricted progenitor cell | 3.25e-08 | 52 |
lymphocyte | 4.88e-08 | 53 |
common lymphoid progenitor | 4.88e-08 | 53 |
intermediate monocyte | 6.54e-08 | 9 |
CD14-positive, CD16-positive monocyte | 6.54e-08 | 9 |
endocrine cell | 8.10e-08 | 9 |
granulocyte monocyte progenitor cell | 2.51e-07 | 67 |
mesenchymal cell | 5.36e-07 | 354 |
connective tissue cell | 8.85e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.41e-08 | 76 |
bone element | 3.56e-07 | 82 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.