FFCP PHASE1:Hg19::chr13:102569922..102569927,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3350|description=CAGE_peak_at_chr13:102569922..102569927,-|id=chr13:102569922..102569927,-|ontology_enrichment_celltype=CL:0002553!4.09e-07!1|ontology_enrichment_celltype_v019=CL:0002553;8.64e-30;1|ontology_enrichment_celltype_v019_2=CL:0002553,7.48e-30,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4362;4.93e-07;5|ontology_enrichment_disease_v019_2=DOID:4362,5.08e-07,5|ontology_enrichment_uberon=UBERON:0001049!4.17e-43!57;UBERON:0005068!4.17e-43!57;UBERON:0006241!4.17e-43!57;UBERON:0007135!4.17e-43!57;UBERON:0002616!1.68e-41!59;UBERON:0002780!4.08e-37!41;UBERON:0001890!4.08e-37!41;UBERON:0006240!4.08e-37!41;UBERON:0003080!3.69e-36!42;UBERON:0000955!2.74e-34!69;UBERON:0006238!2.74e-34!69;UBERON:0001869!5.94e-33!32;UBERON:0001893!6.96e-31!34;UBERON:0002020!8.13e-31!34;UBERON:0003528!8.13e-31!34;UBERON:0001017!3.36e-28!82;UBERON:0002791!1.18e-27!33;UBERON:0003075!4.71e-27!86;UBERON:0007284!4.71e-27!86;UBERON:0005743!1.09e-26!86;UBERON:0002346!1.21e-25!90;UBERON:0003056!7.51e-24!61;UBERON:0000073!9.61e-24!94;UBERON:0001016!9.61e-24!94;UBERON:0000369!2.40e-21!4;UBERON:0002435!2.40e-21!4;UBERON:0000204!2.40e-21!4;UBERON:0010082!2.40e-21!4;UBERON:0002420!1.97e-20!9;UBERON:0007245!1.97e-20!9;UBERON:0010009!1.97e-20!9;UBERON:0010011!1.97e-20!9;UBERON:0000454!1.97e-20!9;UBERON:0002308!2.11e-20!9;UBERON:0000125!2.11e-20!9;UBERON:0001950!3.28e-19!20;UBERON:0009663!1.32e-18!7;UBERON:0002619!2.09e-17!22;UBERON:0000033!2.69e-17!123;UBERON:0005383!1.17e-16!3;UBERON:0005382!1.17e-16!3;UBERON:0000153!2.83e-16!129;UBERON:0007811!2.83e-16!129;UBERON:0001896!3.38e-16!3;UBERON:0005290!3.38e-16!3;UBERON:0010096!3.38e-16!3;UBERON:0002298!6.99e-16!8;UBERON:0007023!2.05e-15!115;UBERON:0000025!2.26e-15!194;UBERON:0000956!3.21e-15!25;UBERON:0000203!3.21e-15!25;UBERON:0000064!5.89e-13!219;UBERON:0000007!4.19e-12!2;UBERON:0001873!1.24e-11!2;UBERON:0010122!1.24e-11!2;UBERON:0004111!3.06e-11!241;UBERON:0004121!3.29e-11!169;UBERON:0000924!7.65e-11!173;UBERON:0006601!7.65e-11!173;UBERON:0004733!1.59e-10!12;UBERON:0002028!1.59e-10!12;UBERON:0007277!1.59e-10!12;UBERON:0001872!2.31e-10!5;UBERON:0004732!1.07e-09!13;UBERON:0000477!1.47e-08!286;UBERON:0003076!2.25e-08!15;UBERON:0003057!2.25e-08!15;UBERON:0000483!2.50e-08!309;UBERON:0000119!3.43e-08!312;UBERON:0000988!1.17e-07!3;UBERON:0001894!1.45e-07!7;UBERON:0006222!1.45e-07!7;UBERON:0002171!9.48e-07!1;UBERON:0006518!9.48e-07!1;UBERON:0008949!9.48e-07!1;UBERON:0000101!9.48e-07!1;UBERON:0002167!9.48e-07!1;UBERON:0000481!9.66e-07!347|ontology_enrichment_uberon_v019=UBERON:0001950;8.91e-13;20!UBERON:0002619;9.92e-12;22!UBERON:0000956;1.85e-10;25!UBERON:0000203;1.85e-10;25!UBERON:0002791;5.44e-08;32!UBERON:0003528;8.22e-08;34!UBERON:0002020;8.22e-08;34!UBERON:0001869;8.22e-08;32!UBERON:0001872;6.21e-07;5!UBERON:0002021;6.21e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.47e-13,20;UBERON:0002619,1.05e-11,22;UBERON:0000956,1.94e-10,25;UBERON:0000203,1.94e-10,25;UBERON:0002791,2.28e-08,32;UBERON:0001869,2.28e-08,32;UBERON:0003528,6.31e-08,34;UBERON:0002020,6.31e-08,34;UBERON:0001893,6.31e-08,34;UBERON:0002021,6.04e-07,5;UBERON:0001872,6.77e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3350 | |||
|description=CAGE_peak_at_chr13:102569922..102569927,- | |||
|id=chr13:102569922..102569927,- | |||
|ontology_enrichment_celltype=CL:0002553!4.09e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002553;8.64e-30;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,7.48e-30,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;4.93e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.08e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.17e-43!57;UBERON:0005068!4.17e-43!57;UBERON:0006241!4.17e-43!57;UBERON:0007135!4.17e-43!57;UBERON:0002616!1.68e-41!59;UBERON:0002780!4.08e-37!41;UBERON:0001890!4.08e-37!41;UBERON:0006240!4.08e-37!41;UBERON:0003080!3.69e-36!42;UBERON:0000955!2.74e-34!69;UBERON:0006238!2.74e-34!69;UBERON:0001869!5.94e-33!32;UBERON:0001893!6.96e-31!34;UBERON:0002020!8.13e-31!34;UBERON:0003528!8.13e-31!34;UBERON:0001017!3.36e-28!82;UBERON:0002791!1.18e-27!33;UBERON:0003075!4.71e-27!86;UBERON:0007284!4.71e-27!86;UBERON:0005743!1.09e-26!86;UBERON:0002346!1.21e-25!90;UBERON:0003056!7.51e-24!61;UBERON:0000073!9.61e-24!94;UBERON:0001016!9.61e-24!94;UBERON:0000369!2.40e-21!4;UBERON:0002435!2.40e-21!4;UBERON:0000204!2.40e-21!4;UBERON:0010082!2.40e-21!4;UBERON:0002420!1.97e-20!9;UBERON:0007245!1.97e-20!9;UBERON:0010009!1.97e-20!9;UBERON:0010011!1.97e-20!9;UBERON:0000454!1.97e-20!9;UBERON:0002308!2.11e-20!9;UBERON:0000125!2.11e-20!9;UBERON:0001950!3.28e-19!20;UBERON:0009663!1.32e-18!7;UBERON:0002619!2.09e-17!22;UBERON:0000033!2.69e-17!123;UBERON:0005383!1.17e-16!3;UBERON:0005382!1.17e-16!3;UBERON:0000153!2.83e-16!129;UBERON:0007811!2.83e-16!129;UBERON:0001896!3.38e-16!3;UBERON:0005290!3.38e-16!3;UBERON:0010096!3.38e-16!3;UBERON:0002298!6.99e-16!8;UBERON:0007023!2.05e-15!115;UBERON:0000025!2.26e-15!194;UBERON:0000956!3.21e-15!25;UBERON:0000203!3.21e-15!25;UBERON:0000064!5.89e-13!219;UBERON:0000007!4.19e-12!2;UBERON:0001873!1.24e-11!2;UBERON:0010122!1.24e-11!2;UBERON:0004111!3.06e-11!241;UBERON:0004121!3.29e-11!169;UBERON:0000924!7.65e-11!173;UBERON:0006601!7.65e-11!173;UBERON:0004733!1.59e-10!12;UBERON:0002028!1.59e-10!12;UBERON:0007277!1.59e-10!12;UBERON:0001872!2.31e-10!5;UBERON:0004732!1.07e-09!13;UBERON:0000477!1.47e-08!286;UBERON:0003076!2.25e-08!15;UBERON:0003057!2.25e-08!15;UBERON:0000483!2.50e-08!309;UBERON:0000119!3.43e-08!312;UBERON:0000988!1.17e-07!3;UBERON:0001894!1.45e-07!7;UBERON:0006222!1.45e-07!7;UBERON:0002171!9.48e-07!1;UBERON:0006518!9.48e-07!1;UBERON:0008949!9.48e-07!1;UBERON:0000101!9.48e-07!1;UBERON:0002167!9.48e-07!1;UBERON:0000481!9.66e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.91e-13;20!UBERON:0002619;9.92e-12;22!UBERON:0000956;1.85e-10;25!UBERON:0000203;1.85e-10;25!UBERON:0002791;5.44e-08;32!UBERON:0003528;8.22e-08;34!UBERON:0002020;8.22e-08;34!UBERON:0001869;8.22e-08;32!UBERON:0001872;6.21e-07;5!UBERON:0002021;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,9.47e-13,20;UBERON:0002619,1.05e-11,22;UBERON:0000956,1.94e-10,25;UBERON:0000203,1.94e-10,25;UBERON:0002791,2.28e-08,32;UBERON:0001869,2.28e-08,32;UBERON:0003528,6.31e-08,34;UBERON:0002020,6.31e-08,34;UBERON:0001893,6.31e-08,34;UBERON:0002021,6.04e-07,5;UBERON:0001872,6.77e-07,5 | |||
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|short_description=p@chr13:102569922..102569927,- | |||
}} |
Revision as of 01:19, 11 September 2013
Short description: | p@chr13:102569922..102569927, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:102569922..102569927, - |
Coexpression cluster: | C3350_small_smallcell_nonsmall_pituitary_rhabdomyosarcoma_occipital_argyrophil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 7.48e-30 | 1 |
Ontology term | p-value | n |
---|---|---|
neocortex | 9.47e-13 | 20 |
regional part of cerebral cortex | 1.05e-11 | 22 |
cerebral cortex | 1.94e-10 | 25 |
pallium | 1.94e-10 | 25 |
regional part of telencephalon | 2.28e-08 | 32 |
cerebral hemisphere | 2.28e-08 | 32 |
brain grey matter | 6.31e-08 | 34 |
gray matter | 6.31e-08 | 34 |
telencephalon | 6.31e-08 | 34 |
occipital lobe | 6.04e-07 | 5 |
parietal lobe | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.08e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.