FFCP PHASE1:Hg19::chr13:111855414..111855417,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8874|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15607|TSSclassifier=S|UniProt=B7Z6G2|association_with_transcript=0bp_to_ENST00000375737_5end|coexpression_cluster_id=C80|description=CAGE_peak_21_at_ARHGEF7_5end|id=chr13:111855414..111855417,+|ontology_enrichment_celltype=CL:0002139!1.19e-22!24;CL:0000071!1.83e-15!18;CL:0002546!1.83e-15!18;CL:0000115!3.85e-13!35;CL:0002078!4.80e-09!44;CL:0005020!5.46e-09!6;CL:0002138!5.46e-09!6;CL:0005022!5.46e-09!6;CL:1000413!2.52e-07!9|ontology_enrichment_celltype_v019=CL:0002139;5.35e-28;24!CL:0000071;1.42e-18;18!CL:0000115;9.04e-17;36!CL:0001014;3.29e-16;2!CL:0001016;3.29e-16;2!CL:0002138;2.18e-11;6!CL:0002078;4.91e-11;45!CL:0002144;1.16e-10;3!CL:1000413;1.28e-07;9!CL:0000213;1.54e-07;58!CL:0000215;1.54e-07;58!CL:0000453;5.43e-07;5|ontology_enrichment_celltype_v019_2=CL:0002139,8.36e-28,24;CL:0000071,1.57e-18,18;CL:0002546,1.57e-18,18;CL:0000115,5.34e-18,36;CL:0001014,3.30e-16,2;CL:0001016,3.30e-16,2;CL:0002078,4.51e-14,45;CL:0005020,3.29e-11,6;CL:0002138,3.29e-11,6;CL:0005022,3.29e-11,6;CL:0002144,1.22e-10,3;CL:0000213,1.50e-10,58;CL:0000215,1.50e-10,58;CL:1000413,1.36e-07,9;CL:0000453,5.44e-07,5|ontology_enrichment_development_v019=CL:0002546;1.42e-18;18!CL:0005022;2.18e-11;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001009!1.40e-20!113;UBERON:0002049!3.69e-19!79;UBERON:0007798!3.69e-19!79;UBERON:0004535!1.50e-18!110;UBERON:0004872!8.01e-16!84;UBERON:0000055!1.00e-15!69;UBERON:0001986!1.83e-15!18;UBERON:0004638!1.83e-15!18;UBERON:0004852!1.83e-15!18;UBERON:0000025!8.38e-13!194;UBERON:0000477!2.19e-12!286;UBERON:0001981!5.15e-12!60;UBERON:0007500!5.15e-12!60;UBERON:0004537!5.15e-12!60;UBERON:0006965!5.15e-12!60;UBERON:0004111!5.75e-12!241;UBERON:0000487!1.01e-11!22;UBERON:0000119!4.28e-11!312;UBERON:0007023!1.59e-10!115;UBERON:0000483!1.77e-10!309;UBERON:0002346!7.02e-10!90;UBERON:0006914!9.88e-10!25;UBERON:0003075!2.30e-09!86;UBERON:0007284!2.30e-09!86;UBERON:0001893!3.28e-08!34;UBERON:0001017!4.94e-08!82;UBERON:0005743!6.37e-08!86;UBERON:0003914!6.81e-08!118;UBERON:0003056!8.94e-08!61;UBERON:0002616!9.56e-08!59;UBERON:0003080!1.01e-07!42;UBERON:0002791!1.03e-07!33;UBERON:0002020!2.16e-07!34;UBERON:0003528!2.16e-07!34;UBERON:0003915!2.52e-07!9;UBERON:0004700!2.52e-07!9;UBERON:0001917!2.52e-07!9;UBERON:0001869!2.94e-07!32;UBERON:0007100!4.21e-07!27;UBERON:0000955!4.26e-07!69;UBERON:0006238!4.26e-07!69;UBERON:0002780!5.65e-07!41;UBERON:0001890!5.65e-07!41;UBERON:0006240!5.65e-07!41;UBERON:0001049!8.41e-07!57;UBERON:0005068!8.41e-07!57;UBERON:0006241!8.41e-07!57;UBERON:0007135!8.41e-07!57|ontology_enrichment_uberon_v019=UBERON:0004638;1.42e-18;18!UBERON:0001986;1.42e-18;18!UBERON:0004852;1.42e-18;18!UBERON:0000487;4.67e-15;22!UBERON:0006914;3.72e-13;25!UBERON:0010523;1.16e-10;3!UBERON:0001915;1.16e-10;3!UBERON:0001982;1.16e-10;3!UBERON:0002134;7.83e-09;1!UBERON:0005208;7.83e-09;1!UBERON:0004145;7.83e-09;1!UBERON:0005946;7.83e-09;1!UBERON:0005965;7.83e-09;1!UBERON:0002078;7.83e-09;1!UBERON:0001473;1.16e-08;8!UBERON:0004536;1.16e-08;8!UBERON:0006558;1.16e-08;8!UBERON:0000490;1.16e-08;33!UBERON:0007029;2.05e-08;1!UBERON:0002426;2.05e-08;1!UBERON:0003831;2.05e-08;1!UBERON:0003898;2.05e-08;1!UBERON:0004830;2.05e-08;1!UBERON:0003830;2.05e-08;1!UBERON:0005175;2.05e-08;1!UBERON:0001774;2.05e-08;1!UBERON:0001103;2.05e-08;1!UBERON:0003915;1.28e-07;9!UBERON:0004700;1.28e-07;9!UBERON:0001917;1.28e-07;9!UBERON:0002465;5.10e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.57e-18,18;UBERON:0001986,1.57e-18,18;UBERON:0004852,1.57e-18,18;UBERON:0000487,5.06e-15,22;UBERON:0006914,3.99e-13,25;UBERON:0000055,6.22e-13,68;UBERON:0002049,5.35e-11,78;UBERON:0007798,5.35e-11,78;UBERON:0010523,1.22e-10,3;UBERON:0001915,1.22e-10,3;UBERON:0001982,1.22e-10,3;UBERON:0002134,6.50e-09,1;UBERON:0005208,6.50e-09,1;UBERON:0005946,6.50e-09,1;UBERON:0005965,6.50e-09,1;UBERON:0002078,6.50e-09,1;UBERON:0007029,1.02e-08,1;UBERON:0004535,1.17e-08,109;UBERON:0002426,1.48e-08,1;UBERON:0003831,1.48e-08,1;UBERON:0003898,1.48e-08,1;UBERON:0004830,1.48e-08,1;UBERON:0003830,1.48e-08,1;UBERON:0005175,1.48e-08,1;UBERON:0001774,1.48e-08,1;UBERON:0001103,1.48e-08,1;UBERON:0010084,1.48e-08,1;UBERON:0004872,1.53e-08,83;UBERON:0001473,1.57e-08,8;UBERON:0004536,1.57e-08,8;UBERON:0006558,1.57e-08,8;UBERON:0007500,1.84e-08,59;UBERON:0001981,1.84e-08,59;UBERON:0004537,1.84e-08,59;UBERON:0006965,1.84e-08,59;UBERON:0001009,2.30e-08,112;UBERON:0003915,1.36e-07,9;UBERON:0004700,1.36e-07,9;UBERON:0001917,1.36e-07,9;UBERON:0002465,6.48e-07,10|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8874 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15607 | |||
|TSSclassifier=S | |||
|UniProt=B7Z6G2 | |||
|association_with_transcript=0bp_to_ENST00000375737_5end | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_21_at_ARHGEF7_5end | |||
|id=chr13:111855414..111855417,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.19e-22!24;CL:0000071!1.83e-15!18;CL:0002546!1.83e-15!18;CL:0000115!3.85e-13!35;CL:0002078!4.80e-09!44;CL:0005020!5.46e-09!6;CL:0002138!5.46e-09!6;CL:0005022!5.46e-09!6;CL:1000413!2.52e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.35e-28;24!CL:0000071;1.42e-18;18!CL:0000115;9.04e-17;36!CL:0001014;3.29e-16;2!CL:0001016;3.29e-16;2!CL:0002138;2.18e-11;6!CL:0002078;4.91e-11;45!CL:0002144;1.16e-10;3!CL:1000413;1.28e-07;9!CL:0000213;1.54e-07;58!CL:0000215;1.54e-07;58!CL:0000453;5.43e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.36e-28,24;CL:0000071,1.57e-18,18;CL:0002546,1.57e-18,18;CL:0000115,5.34e-18,36;CL:0001014,3.30e-16,2;CL:0001016,3.30e-16,2;CL:0002078,4.51e-14,45;CL:0005020,3.29e-11,6;CL:0002138,3.29e-11,6;CL:0005022,3.29e-11,6;CL:0002144,1.22e-10,3;CL:0000213,1.50e-10,58;CL:0000215,1.50e-10,58;CL:1000413,1.36e-07,9;CL:0000453,5.44e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;1.42e-18;18!CL:0005022;2.18e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!1.40e-20!113;UBERON:0002049!3.69e-19!79;UBERON:0007798!3.69e-19!79;UBERON:0004535!1.50e-18!110;UBERON:0004872!8.01e-16!84;UBERON:0000055!1.00e-15!69;UBERON:0001986!1.83e-15!18;UBERON:0004638!1.83e-15!18;UBERON:0004852!1.83e-15!18;UBERON:0000025!8.38e-13!194;UBERON:0000477!2.19e-12!286;UBERON:0001981!5.15e-12!60;UBERON:0007500!5.15e-12!60;UBERON:0004537!5.15e-12!60;UBERON:0006965!5.15e-12!60;UBERON:0004111!5.75e-12!241;UBERON:0000487!1.01e-11!22;UBERON:0000119!4.28e-11!312;UBERON:0007023!1.59e-10!115;UBERON:0000483!1.77e-10!309;UBERON:0002346!7.02e-10!90;UBERON:0006914!9.88e-10!25;UBERON:0003075!2.30e-09!86;UBERON:0007284!2.30e-09!86;UBERON:0001893!3.28e-08!34;UBERON:0001017!4.94e-08!82;UBERON:0005743!6.37e-08!86;UBERON:0003914!6.81e-08!118;UBERON:0003056!8.94e-08!61;UBERON:0002616!9.56e-08!59;UBERON:0003080!1.01e-07!42;UBERON:0002791!1.03e-07!33;UBERON:0002020!2.16e-07!34;UBERON:0003528!2.16e-07!34;UBERON:0003915!2.52e-07!9;UBERON:0004700!2.52e-07!9;UBERON:0001917!2.52e-07!9;UBERON:0001869!2.94e-07!32;UBERON:0007100!4.21e-07!27;UBERON:0000955!4.26e-07!69;UBERON:0006238!4.26e-07!69;UBERON:0002780!5.65e-07!41;UBERON:0001890!5.65e-07!41;UBERON:0006240!5.65e-07!41;UBERON:0001049!8.41e-07!57;UBERON:0005068!8.41e-07!57;UBERON:0006241!8.41e-07!57;UBERON:0007135!8.41e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.42e-18;18!UBERON:0001986;1.42e-18;18!UBERON:0004852;1.42e-18;18!UBERON:0000487;4.67e-15;22!UBERON:0006914;3.72e-13;25!UBERON:0010523;1.16e-10;3!UBERON:0001915;1.16e-10;3!UBERON:0001982;1.16e-10;3!UBERON:0002134;7.83e-09;1!UBERON:0005208;7.83e-09;1!UBERON:0004145;7.83e-09;1!UBERON:0005946;7.83e-09;1!UBERON:0005965;7.83e-09;1!UBERON:0002078;7.83e-09;1!UBERON:0001473;1.16e-08;8!UBERON:0004536;1.16e-08;8!UBERON:0006558;1.16e-08;8!UBERON:0000490;1.16e-08;33!UBERON:0007029;2.05e-08;1!UBERON:0002426;2.05e-08;1!UBERON:0003831;2.05e-08;1!UBERON:0003898;2.05e-08;1!UBERON:0004830;2.05e-08;1!UBERON:0003830;2.05e-08;1!UBERON:0005175;2.05e-08;1!UBERON:0001774;2.05e-08;1!UBERON:0001103;2.05e-08;1!UBERON:0003915;1.28e-07;9!UBERON:0004700;1.28e-07;9!UBERON:0001917;1.28e-07;9!UBERON:0002465;5.10e-07;10 | |||
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|short_description=p21@ARHGEF7 | |||
}} |
Revision as of 01:31, 11 September 2013
Short description: | p21@ARHGEF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_ARHGEF7_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 0bp_to_ENST00000375737_5end |
EntrezGene: | ARHGEF7 |
HGNC: | 15607 |
UniProt: | B7Z6G2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.36e-28 | 24 |
blood vessel endothelial cell | 1.57e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.57e-18 | 18 |
endothelial cell | 5.34e-18 | 36 |
CD1a-positive Langerhans cell | 3.30e-16 | 2 |
immature CD1a-positive Langerhans cell | 3.30e-16 | 2 |
meso-epithelial cell | 4.51e-14 | 45 |
lymphangioblast | 3.29e-11 | 6 |
endothelial cell of lymphatic vessel | 3.29e-11 | 6 |
vascular lymphangioblast | 3.29e-11 | 6 |
capillary endothelial cell | 1.22e-10 | 3 |
lining cell | 1.50e-10 | 58 |
barrier cell | 1.50e-10 | 58 |
endothelial cell of artery | 1.36e-07 | 9 |
Langerhans cell | 5.44e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.