FFCP PHASE1:Hg19::chr15:101459591..101459607,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79705|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18608|TSSclassifier=S|UniProt=|association_with_transcript=41bp_to_ENST00000532029_5end|description=CAGE_peak_3_at_LRRK1_5end|id=chr15:101459591..101459607,+|ontology_enrichment_celltype=CL:0000557!5.29e-13!71;CL:0002009!3.88e-12!65;CL:0000860!6.86e-12!45;CL:0002057!1.24e-11!42;CL:0000763!2.99e-11!112;CL:0000049!2.99e-11!112;CL:0000766!3.28e-11!76;CL:0002194!4.41e-11!63;CL:0000576!4.41e-11!63;CL:0000040!4.41e-11!63;CL:0000559!4.41e-11!63;CL:0000839!1.55e-10!70;CL:0000451!3.22e-09!10;CL:0000990!7.39e-08!8;CL:0000738!1.34e-07!140;CL:0002393!3.46e-07!9;CL:0002397!3.46e-07!9;CL:0000037!7.45e-07!172;CL:0000566!7.45e-07!172|ontology_enrichment_celltype_v019=CL:0000451;5.53e-23;10!CL:0000990;2.43e-19;8!CL:0000840;2.93e-14;5!CL:0002393;7.71e-13;6!CL:0002397;7.71e-13;6!CL:0000453;7.37e-11;5!CL:0000576;2.69e-08;48!CL:0000784;2.17e-07;3!CL:0000875;6.31e-07;3!CL:0002396;6.31e-07;3|ontology_enrichment_celltype_v019_2=CL:0000451,1.99e-23,10;CL:0000990,1.53e-19,8;CL:0002393,1.24e-17,9;CL:0002397,1.24e-17,9;CL:0002009,1.48e-16,61;CL:0000557,9.75e-16,67;CL:0000860,5.68e-15,42;CL:0002057,5.68e-15,42;CL:0000763,2.45e-14,108;CL:0000049,2.45e-14,108;CL:0002194,3.18e-14,59;CL:0000576,3.18e-14,59;CL:0000040,3.18e-14,59;CL:0000559,3.18e-14,59;CL:0000840,3.22e-14,5;CL:0001029,3.22e-14,5;CL:0000738,7.55e-14,136;CL:0000766,6.74e-13,72;CL:0000473,2.15e-12,48;CL:0000234,2.15e-12,48;CL:0000037,3.23e-12,168;CL:0000839,5.04e-12,66;CL:0000453,4.80e-11,5;CL:0000988,5.17e-11,177;CL:0002032,9.99e-11,161;CL:0000837,9.99e-11,161;CL:0002087,4.77e-09,115;CL:0002031,2.03e-08,120;CL:0000784,1.19e-07,3;CL:0000875,4.97e-07,3;CL:0002396,4.97e-07,3|ontology_enrichment_development_v019=CL:0002057;1.21e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.25e-13!112;UBERON:0002371!1.49e-12!80;UBERON:0001474!1.79e-11!86;UBERON:0002390!4.37e-11!102;UBERON:0003061!4.37e-11!102;UBERON:0002405!8.05e-11!115;UBERON:0004765!3.87e-10!101;UBERON:0001434!3.87e-10!101;UBERON:0003081!2.62e-08!216;UBERON:0002204!2.76e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.09e-19,93;UBERON:0002193,1.33e-17,108;UBERON:0002371,2.91e-14,76;UBERON:0001474,7.74e-14,82;UBERON:0002390,2.65e-13,98;UBERON:0003061,2.65e-13,98;UBERON:0004765,6.66e-12,90;UBERON:0001434,6.06e-10,100;UBERON:0003081,1.59e-08,203;UBERON:0002465,8.63e-07,10|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0.783556884599516,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0,0.840547463227464,0.903106483949403,0.708397031823113,0,0,1.85779347979291,0.919421224478927,0.30120591877825,0.739508020333575,2.78881922089086,0.710846162437108,0,3.32397245119126,2.4065333696417,2.60413044859022,0.223915474239924,0,0.77272670290256,1.16318591023652,1.13362783106643,0.970336244751265,0.464858073811369,0.411167888021826,0.619412741790207,0.28769239232215,0.768482119587302,1.18241114944293,0.344745680736619,0.645484683583826,0,0.188242339542605,1.09162460023138,1.12361742222542,1.22433556948361,0.320929027076094,0.639337125799041,1.31940520074686,0.398927315243264,1.27867425159808,0.580418477257168,0.56738522469114,1.24564449799115,0,0,0.434377689410233,0,0.368277635987565,0.949387162322653,1.05627643155971,2.76385589954557,1.04829322754188,1.23561494261145,1.20141514273205,1.12507910687956,4.27519115611873,1.9891667719909,1.0959849225878,0,0,0,0.853460445133014,0,1.14950487990897,0,0,1.1384259382189,0.587237189370939,0,1.32171328579026,1.12101712596307,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,1.44575660953827,0,0.869079113764942,0,0,0.189069634328136,0,0.087834785693126,0.458426764241994,0,0,4.54366351116557,6.09454080547435,5.05240249971688,3.57735936458013,3.43196946468077,1.48583000531826,0.993812036833525,0.860234595106124,0.347140501607594,1.13061588384802,0,0,0.835979866147242,1.29208379584664,1.06729878806013,1.33888245105868,0.402829317109147,0,0.488124115096339,0,0.81014194788176,0.625098097988558,0.673588117878509,0.225222960966644,3.06633274931766,0.949265659568129,0.366403487860815,0,0,0,0,0.379891534993739,1.05927344650575,1.14734648299525,0.709336764396714,0,1.06748995729705,0.74000264525148,0.311211035399766,0.67355336034844,0.490385709340376,0,0,0,0,0.570471821544449,0.747243402759005,0.117434498643765,0.647491777472526,0.280901613404497,0.408308342509787,0.61417158655884,0.103325781175765,1.18800285728205,0.494533858557114,0,2.15585442544872,0,0.375355559615893,0.277064115484183,0.438977620880838,0,0.150238058906597,0.453728732640084,0.89694817844431,0.213557388818567,0,0.300091096084402,0.412210116953756,0.515281080091258,0,0.843881661206331,0.682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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79705 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18608 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=41bp_to_ENST00000532029_5end | |||
|description=CAGE_peak_3_at_LRRK1_5end | |||
|id=chr15:101459591..101459607,+ | |||
|ontology_enrichment_celltype=CL:0000557!5.29e-13!71;CL:0002009!3.88e-12!65;CL:0000860!6.86e-12!45;CL:0002057!1.24e-11!42;CL:0000763!2.99e-11!112;CL:0000049!2.99e-11!112;CL:0000766!3.28e-11!76;CL:0002194!4.41e-11!63;CL:0000576!4.41e-11!63;CL:0000040!4.41e-11!63;CL:0000559!4.41e-11!63;CL:0000839!1.55e-10!70;CL:0000451!3.22e-09!10;CL:0000990!7.39e-08!8;CL:0000738!1.34e-07!140;CL:0002393!3.46e-07!9;CL:0002397!3.46e-07!9;CL:0000037!7.45e-07!172;CL:0000566!7.45e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000451;5.53e-23;10!CL:0000990;2.43e-19;8!CL:0000840;2.93e-14;5!CL:0002393;7.71e-13;6!CL:0002397;7.71e-13;6!CL:0000453;7.37e-11;5!CL:0000576;2.69e-08;48!CL:0000784;2.17e-07;3!CL:0000875;6.31e-07;3!CL:0002396;6.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000451,1.99e-23,10;CL:0000990,1.53e-19,8;CL:0002393,1.24e-17,9;CL:0002397,1.24e-17,9;CL:0002009,1.48e-16,61;CL:0000557,9.75e-16,67;CL:0000860,5.68e-15,42;CL:0002057,5.68e-15,42;CL:0000763,2.45e-14,108;CL:0000049,2.45e-14,108;CL:0002194,3.18e-14,59;CL:0000576,3.18e-14,59;CL:0000040,3.18e-14,59;CL:0000559,3.18e-14,59;CL:0000840,3.22e-14,5;CL:0001029,3.22e-14,5;CL:0000738,7.55e-14,136;CL:0000766,6.74e-13,72;CL:0000473,2.15e-12,48;CL:0000234,2.15e-12,48;CL:0000037,3.23e-12,168;CL:0000839,5.04e-12,66;CL:0000453,4.80e-11,5;CL:0000988,5.17e-11,177;CL:0002032,9.99e-11,161;CL:0000837,9.99e-11,161;CL:0002087,4.77e-09,115;CL:0002031,2.03e-08,120;CL:0000784,1.19e-07,3;CL:0000875,4.97e-07,3;CL:0002396,4.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.21e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.25e-13!112;UBERON:0002371!1.49e-12!80;UBERON:0001474!1.79e-11!86;UBERON:0002390!4.37e-11!102;UBERON:0003061!4.37e-11!102;UBERON:0002405!8.05e-11!115;UBERON:0004765!3.87e-10!101;UBERON:0001434!3.87e-10!101;UBERON:0003081!2.62e-08!216;UBERON:0002204!2.76e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.09e-19,93;UBERON:0002193,1.33e-17,108;UBERON:0002371,2.91e-14,76;UBERON:0001474,7.74e-14,82;UBERON:0002390,2.65e-13,98;UBERON:0003061,2.65e-13,98;UBERON:0004765,6.66e-12,90;UBERON:0001434,6.06e-10,100;UBERON:0003081,1.59e-08,203;UBERON:0002465,8.63e-07,10 | |||
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| |||
|short_description=p3@LRRK1 | |||
}} |
Revision as of 06:19, 11 September 2013
Short description: | p3@LRRK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LRRK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000532029_5end |
EntrezGene: | LRRK1 |
HGNC: | 18608 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immune system | 2.09e-19 | 93 |
hemolymphoid system | 1.33e-17 | 108 |
bone marrow | 2.91e-14 | 76 |
bone element | 7.74e-14 | 82 |
hematopoietic system | 2.65e-13 | 98 |
blood island | 2.65e-13 | 98 |
skeletal element | 6.66e-12 | 90 |
skeletal system | 6.06e-10 | 100 |
lateral plate mesoderm | 1.59e-08 | 203 |
lymphoid system | 8.63e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.