FFCP PHASE1:Hg19::chr15:39880996..39881011,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7057|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11785|TSSclassifier=S|UniProt=|association_with_transcript=-37bp_to_ENST00000490247_5end|coexpression_cluster_id=C1206|description=CAGE_peak_41_at_THBS1_5end|id=chr15:39880996..39881011,+|ontology_enrichment_celltype=CL:0000057!9.05e-14!75;CL:0002620!1.54e-09!23;CL:0002371!1.85e-07!591|ontology_enrichment_celltype_v019=CL:0000197;6.39e-17;6!CL:0000098;6.39e-17;6!CL:0002167;6.39e-17;6!CL:0002620;8.71e-16;23!CL:0002580;3.24e-09;3!CL:0000511;2.74e-07;1!CL:0002625;2.74e-07;1!CL:0000216;2.74e-07;1|ontology_enrichment_celltype_v019_2=CL:0000197,8.03e-17,6;CL:0000098,8.03e-17,6;CL:0002167,8.03e-17,6;CL:0002620,8.57e-16,23;CL:0000057,7.35e-15,76;CL:0002580,2.15e-09,3;CL:0000511,2.21e-07,1;CL:0002625,2.21e-07,1;CL:0000216,2.21e-07,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!8.77e-08!5;DOID:450!8.77e-08!5;DOID:66!8.77e-08!5;DOID:423!8.77e-08!5;DOID:0080000!8.77e-08!5;DOID:11722!8.77e-08!5|ontology_enrichment_disease_v019=DOID:17;3.57e-30;5!DOID:450;3.57e-30;5!DOID:66;3.57e-30;5!DOID:423;3.57e-30;5!DOID:0080000;3.57e-30;5!DOID:11722;3.57e-30;5!DOID:3571;2.74e-07;1|ontology_enrichment_disease_v019_2=DOID:17,7.23e-30,5;DOID:450,7.23e-30,5;DOID:66,7.23e-30,5;DOID:423,7.23e-30,5;DOID:0080000,7.23e-30,5;DOID:11722,7.23e-30,5;DOID:3571,2.83e-07,1|ontology_enrichment_uberon=UBERON:0002097!1.22e-09!40;UBERON:0002199!1.47e-09!45;UBERON:0002416!1.47e-09!45;UBERON:0003102!4.54e-08!95|ontology_enrichment_uberon_v019=UBERON:0002097;3.43e-10;41!UBERON:0002199;5.63e-08;46!UBERON:0002416;5.63e-08;46!UBERON:0001136;2.74e-07;1!UBERON:0001343;2.74e-07;1!UBERON:0004910;2.74e-07;1!UBERON:0004813;2.74e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.50e-13,41;UBERON:0002199,1.83e-11,46;UBERON:0002416,1.83e-11,46;UBERON:0001136,2.21e-07,1;UBERON:0001343,2.21e-07,1;UBERON:0004910,2.21e-07,1;UBERON:0005154,2.21e-07,1;UBERON:0005295,2.21e-07,1;UBERON:0004813,2.21e-07,1;UBERON:0005297,2.21e-07,1;UBERON:0005294,2.21e-07,1;UBERON:0010141,2.21e-07,1;UBERON:0005891,2.21e-07,1|phase1_expression=0.181678379270557,1.92690471501885,0.422863212287913,3.00219895059391,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80490002723128,0,0,0.32389366601898,0,0.290796477559129,0,0,0.929716147622738,0,0,1.43846196161075,0.256160706529101,0.236482229888585,0.344745680736619,0.645484683583826,0,0.376484679085209,0.545812300115692,0,0.918251677112708,0,0,0.329851300186716,0.199463657621632,0,1.45104619314292,0,0.622822248995575,0.75374599577023,0,0,3.63239701580021,0,0,0,0,0,0.336985893439485,0.600707571366025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0.50133791063589,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0.208994966536811,0.516833518338658,0,0,0,0,0.976248230192678,0.367663080345869,0.81014194788176,0.803697554556718,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.926864265692532,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,1.48360157567134,0,0,0,0.125118519871964,0,0.438977620880838,1.22595118319608,0.150238058906597,0,5.02290979928813,1.70845911054854,1.05965950579781,1.50045548042201,1.03052529238439,5.92573242104947,0.37223371266318,0.843881661206331,0.876933046450788,1.7670364197088,0.828449087780694,0,1.77504796258307,0.10075209822764,0.169560592310488,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,0,2.3218396401599,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9115920614313,4.81758269752337,2.05013139544115,1.17141414992713,0,0,0,0,0,0.347534457872331,0,0,0.413536052245775,0,0,0,0,0,0,3.22270143904931,1.96462066103151,0.256278298511402,0.511707249066704,1.12597744800525,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.802025881213139,0,0,0.910455840033585,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,1.6068392984416,0,0.154048617114644,0,0.275673144969061,0,0,0,0,0,0.192190067365106,0.510450849978337,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0.276283915531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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-37bp_to_ENST00000490247_5end | |||
|coexpression_cluster_id=C1206 | |||
|description=CAGE_peak_41_at_THBS1_5end | |||
|id=chr15:39880996..39881011,+ | |||
|ontology_enrichment_celltype=CL:0000057!9.05e-14!75;CL:0002620!1.54e-09!23;CL:0002371!1.85e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000197;6.39e-17;6!CL:0000098;6.39e-17;6!CL:0002167;6.39e-17;6!CL:0002620;8.71e-16;23!CL:0002580;3.24e-09;3!CL:0000511;2.74e-07;1!CL:0002625;2.74e-07;1!CL:0000216;2.74e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,8.03e-17,6;CL:0000098,8.03e-17,6;CL:0002167,8.03e-17,6;CL:0002620,8.57e-16,23;CL:0000057,7.35e-15,76;CL:0002580,2.15e-09,3;CL:0000511,2.21e-07,1;CL:0002625,2.21e-07,1;CL:0000216,2.21e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!8.77e-08!5;DOID:450!8.77e-08!5;DOID:66!8.77e-08!5;DOID:423!8.77e-08!5;DOID:0080000!8.77e-08!5;DOID:11722!8.77e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;3.57e-30;5!DOID:450;3.57e-30;5!DOID:66;3.57e-30;5!DOID:423;3.57e-30;5!DOID:0080000;3.57e-30;5!DOID:11722;3.57e-30;5!DOID:3571;2.74e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.23e-30,5;DOID:450,7.23e-30,5;DOID:66,7.23e-30,5;DOID:423,7.23e-30,5;DOID:0080000,7.23e-30,5;DOID:11722,7.23e-30,5;DOID:3571,2.83e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.22e-09!40;UBERON:0002199!1.47e-09!45;UBERON:0002416!1.47e-09!45;UBERON:0003102!4.54e-08!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.43e-10;41!UBERON:0002199;5.63e-08;46!UBERON:0002416;5.63e-08;46!UBERON:0001136;2.74e-07;1!UBERON:0001343;2.74e-07;1!UBERON:0004910;2.74e-07;1!UBERON:0004813;2.74e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.50e-13,41;UBERON:0002199,1.83e-11,46;UBERON:0002416,1.83e-11,46;UBERON:0001136,2.21e-07,1;UBERON:0001343,2.21e-07,1;UBERON:0004910,2.21e-07,1;UBERON:0005154,2.21e-07,1;UBERON:0005295,2.21e-07,1;UBERON:0004813,2.21e-07,1;UBERON:0005297,2.21e-07,1;UBERON:0005294,2.21e-07,1;UBERON:0010141,2.21e-07,1;UBERON:0005891,2.21e-07,1 | |||
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|short_description=p41@THBS1 | |||
}} |
Revision as of 06:49, 11 September 2013
Short description: | p41@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_41_at_THBS1_5end |
Coexpression cluster: | C1206_Fibroblast_CD14_Small_Olfactory_Preadipocyte_Adipocyte_hepatic |
Association with transcript: | -37bp_to_ENST00000490247_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 8.03e-17 | 6 |
sensory epithelial cell | 8.03e-17 | 6 |
olfactory epithelial cell | 8.03e-17 | 6 |
skin fibroblast | 8.57e-16 | 23 |
fibroblast | 7.35e-15 | 76 |
preadipocyte of the breast | 2.15e-09 | 3 |
androgen binding protein secreting cell | 2.21e-07 | 1 |
seminiferous tubule epithelial cell | 2.21e-07 | 1 |
Sertoli cell | 2.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.50e-13 | 41 |
integument | 1.83e-11 | 46 |
integumental system | 1.83e-11 | 46 |
mesothelium | 2.21e-07 | 1 |
seminiferous tubule of testis | 2.21e-07 | 1 |
epithelium of male gonad | 2.21e-07 | 1 |
epithelial cord | 2.21e-07 | 1 |
sex cord | 2.21e-07 | 1 |
seminiferous tubule epithelium | 2.21e-07 | 1 |
testis sex cord | 2.21e-07 | 1 |
genital ridge | 2.21e-07 | 1 |
primitive sex cord of indifferent gonad | 2.21e-07 | 1 |
coelomic epithelium | 2.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.23e-30 | 5 |
myotonic disease | 7.23e-30 | 5 |
muscle tissue disease | 7.23e-30 | 5 |
myopathy | 7.23e-30 | 5 |
muscular disease | 7.23e-30 | 5 |
myotonic dystrophy | 7.23e-30 | 5 |
liver cancer | 2.83e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.