FFCP PHASE1:Hg19::chr15:39883509..39883520,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7057|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11785|TSSclassifier=N|UniProt=|association_with_transcript=380bp_to_ENST00000560894_5end|coexpression_cluster_id=C142|description=CAGE_peak_23_at_THBS1_5end|id=chr15:39883509..39883520,+|ontology_enrichment_celltype=CL:0000057!2.19e-17!75;CL:0002371!6.02e-17!591;CL:0000055!1.98e-15!180;CL:0000144!2.22e-15!625;CL:0000548!1.23e-14!679;CL:0000004!1.23e-14!679;CL:0000255!1.23e-14!679;CL:0000012!4.28e-14!682;CL:0000222!3.14e-13!119;CL:0002139!1.71e-12!24;CL:0000115!1.53e-11!35;CL:0002078!9.82e-10!44;CL:0000220!1.64e-09!246;CL:0000071!1.81e-09!18;CL:0002546!1.81e-09!18;CL:0002321!2.24e-09!248;CL:0002620!2.98e-09!23;CL:0000063!1.27e-08!578;CL:0000213!1.64e-08!57;CL:0000215!1.64e-08!57;CL:0000003!2.47e-08!722;CL:0000723!4.23e-08!436;CL:0002334!4.85e-08!12;CL:0000048!1.69e-07!430;CL:0000034!3.10e-07!444;CL:0000359!3.66e-07!32|ontology_enrichment_celltype_v019=CL:0002139;3.28e-14;24!CL:0002620;1.04e-10;23!CL:0000115;1.10e-10;36!CL:0002334;1.39e-10;12!CL:0000071;2.33e-10;18!CL:1000413;1.37e-09;9!CL:0000057;1.30e-07;73!CL:0002559;1.35e-07;5|ontology_enrichment_celltype_v019_2=CL:0000057,2.29e-22,76;CL:0002139,2.75e-14,24;CL:0000115,1.81e-12,36;CL:0002620,7.80e-11,23;CL:0002334,1.09e-10,12;CL:0000071,1.91e-10,18;CL:0002546,1.91e-10,18;CL:1000413,1.20e-09,9;CL:0000048,3.23e-09,427;CL:0000723,3.89e-09,433;CL:0002078,1.03e-08,45;CL:0000034,1.68e-08,441;CL:0000222,4.74e-08,121;CL:0000213,1.11e-07,58;CL:0000215,1.11e-07,58;CL:0002559,1.29e-07,5;CL:0002537,9.86e-07,5|ontology_enrichment_development_v019=CL:0002546;2.33e-10;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;5.87e-08;5!DOID:450;5.87e-08;5!DOID:66;5.87e-08;5!DOID:423;5.87e-08;5!DOID:0080000;5.87e-08;5!DOID:11722;5.87e-08;5|ontology_enrichment_disease_v019_2=DOID:17,5.96e-08,5;DOID:450,5.96e-08,5;DOID:66,5.96e-08,5;DOID:423,5.96e-08,5;DOID:0080000,5.96e-08,5;DOID:11722,5.96e-08,5|ontology_enrichment_uberon=UBERON:0004872!5.78e-19!84;UBERON:0000055!6.77e-19!69;UBERON:0001981!6.66e-18!60;UBERON:0007500!6.66e-18!60;UBERON:0004537!6.66e-18!60;UBERON:0006965!6.66e-18!60;UBERON:0002049!1.11e-17!79;UBERON:0007798!1.11e-17!79;UBERON:0003914!1.31e-14!118;UBERON:0004535!5.30e-14!110;UBERON:0001009!5.64e-14!113;UBERON:0001637!1.23e-13!42;UBERON:0003509!1.23e-13!42;UBERON:0004572!1.23e-13!42;UBERON:0000468!2.46e-12!659;UBERON:0000467!1.48e-11!625;UBERON:0000480!2.14e-11!626;UBERON:0003102!3.03e-11!95;UBERON:0004573!5.12e-10!33;UBERON:0004571!5.12e-10!33;UBERON:0000926!1.70e-09!448;UBERON:0004120!1.70e-09!448;UBERON:0006603!1.70e-09!448;UBERON:0001986!1.81e-09!18;UBERON:0004638!1.81e-09!18;UBERON:0004852!1.81e-09!18;UBERON:0000490!2.56e-09!138;UBERON:0002097!3.97e-09!40;UBERON:0002199!5.12e-09!45;UBERON:0002416!5.12e-09!45;UBERON:0000487!5.68e-09!22;UBERON:0006914!1.41e-08!25;UBERON:0003081!1.42e-08!216;UBERON:0000914!4.04e-07!83;UBERON:0002329!4.04e-07!83;UBERON:0003077!4.04e-07!83;UBERON:0003059!4.04e-07!83;UBERON:0007282!4.04e-07!83;UBERON:0009618!4.04e-07!83;UBERON:0007285!4.04e-07!83;UBERON:0000947!4.38e-07!21;UBERON:0010191!4.38e-07!21;UBERON:0004923!7.17e-07!57|ontology_enrichment_uberon_v019=UBERON:0001637;1.64e-12;42!UBERON:0003509;1.64e-12;42!UBERON:0004572;1.64e-12;42!UBERON:0004573;9.94e-12;33!UBERON:0004571;9.94e-12;33!UBERON:0004638;2.33e-10;18!UBERON:0001986;2.33e-10;18!UBERON:0004852;2.33e-10;18!UBERON:0007500;7.45e-10;56!UBERON:0001981;7.45e-10;56!UBERON:0004537;7.45e-10;56!UBERON:0003915;1.37e-09;9!UBERON:0004700;1.37e-09;9!UBERON:0001917;1.37e-09;9!UBERON:0002097;1.74e-09;41!UBERON:0003688;2.23e-09;6!UBERON:0002358;2.23e-09;6!UBERON:0003684;2.23e-09;6!UBERON:0001178;2.23e-09;6!UBERON:0000055;3.22e-09;65!UBERON:0000487;4.94e-09;22!UBERON:0000947;6.50e-09;21!UBERON:0010191;6.50e-09;21!UBERON:0005631;1.32e-08;10!UBERON:0000158;1.32e-08;10!UBERON:0000305;2.45e-08;7!UBERON:0002199;3.76e-08;46!UBERON:0002416;3.76e-08;46!UBERON:0002073;1.35e-07;5!UBERON:0006914;1.67e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.09e-16,68;UBERON:0001637,5.94e-15,42;UBERON:0003509,5.94e-15,42;UBERON:0004572,5.94e-15,42;UBERON:0007500,2.74e-14,59;UBERON:0001981,2.74e-14,59;UBERON:0004537,2.74e-14,59;UBERON:0006965,2.74e-14,59;UBERON:0002049,6.84e-13,78;UBERON:0007798,6.84e-13,78;UBERON:0002199,1.96e-12,46;UBERON:0002416,1.96e-12,46;UBERON:0002097,2.01e-12,41;UBERON:0004872,3.55e-12,83;UBERON:0004573,4.23e-12,33;UBERON:0004571,4.23e-12,33;UBERON:0004638,1.91e-10,18;UBERON:0001986,1.91e-10,18;UBERON:0004852,1.91e-10,18;UBERON:0003915,1.20e-09,9;UBERON:0004700,1.20e-09,9;UBERON:0001917,1.20e-09,9;UBERON:0003102,1.33e-09,99;UBERON:0004535,1.65e-09,109;UBERON:0003688,2.03e-09,6;UBERON:0002358,2.03e-09,6;UBERON:0003684,2.03e-09,6;UBERON:0001178,2.03e-09,6;UBERON:0004871,2.60e-09,8;UBERON:0000487,3.88e-09,22;UBERON:0000947,5.77e-09,21;UBERON:0010191,5.77e-09,21;UBERON:0001009,5.77e-09,112;UBERON:0000305,1.53e-08,7;UBERON:0003914,2.88e-08,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=380bp_to_ENST00000560894_5end | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_23_at_THBS1_5end | |||
|id=chr15:39883509..39883520,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.19e-17!75;CL:0002371!6.02e-17!591;CL:0000055!1.98e-15!180;CL:0000144!2.22e-15!625;CL:0000548!1.23e-14!679;CL:0000004!1.23e-14!679;CL:0000255!1.23e-14!679;CL:0000012!4.28e-14!682;CL:0000222!3.14e-13!119;CL:0002139!1.71e-12!24;CL:0000115!1.53e-11!35;CL:0002078!9.82e-10!44;CL:0000220!1.64e-09!246;CL:0000071!1.81e-09!18;CL:0002546!1.81e-09!18;CL:0002321!2.24e-09!248;CL:0002620!2.98e-09!23;CL:0000063!1.27e-08!578;CL:0000213!1.64e-08!57;CL:0000215!1.64e-08!57;CL:0000003!2.47e-08!722;CL:0000723!4.23e-08!436;CL:0002334!4.85e-08!12;CL:0000048!1.69e-07!430;CL:0000034!3.10e-07!444;CL:0000359!3.66e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.28e-14;24!CL:0002620;1.04e-10;23!CL:0000115;1.10e-10;36!CL:0002334;1.39e-10;12!CL:0000071;2.33e-10;18!CL:1000413;1.37e-09;9!CL:0000057;1.30e-07;73!CL:0002559;1.35e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.29e-22,76;CL:0002139,2.75e-14,24;CL:0000115,1.81e-12,36;CL:0002620,7.80e-11,23;CL:0002334,1.09e-10,12;CL:0000071,1.91e-10,18;CL:0002546,1.91e-10,18;CL:1000413,1.20e-09,9;CL:0000048,3.23e-09,427;CL:0000723,3.89e-09,433;CL:0002078,1.03e-08,45;CL:0000034,1.68e-08,441;CL:0000222,4.74e-08,121;CL:0000213,1.11e-07,58;CL:0000215,1.11e-07,58;CL:0002559,1.29e-07,5;CL:0002537,9.86e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;2.33e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.87e-08;5!DOID:450;5.87e-08;5!DOID:66;5.87e-08;5!DOID:423;5.87e-08;5!DOID:0080000;5.87e-08;5!DOID:11722;5.87e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.96e-08,5;DOID:450,5.96e-08,5;DOID:66,5.96e-08,5;DOID:423,5.96e-08,5;DOID:0080000,5.96e-08,5;DOID:11722,5.96e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!5.78e-19!84;UBERON:0000055!6.77e-19!69;UBERON:0001981!6.66e-18!60;UBERON:0007500!6.66e-18!60;UBERON:0004537!6.66e-18!60;UBERON:0006965!6.66e-18!60;UBERON:0002049!1.11e-17!79;UBERON:0007798!1.11e-17!79;UBERON:0003914!1.31e-14!118;UBERON:0004535!5.30e-14!110;UBERON:0001009!5.64e-14!113;UBERON:0001637!1.23e-13!42;UBERON:0003509!1.23e-13!42;UBERON:0004572!1.23e-13!42;UBERON:0000468!2.46e-12!659;UBERON:0000467!1.48e-11!625;UBERON:0000480!2.14e-11!626;UBERON:0003102!3.03e-11!95;UBERON:0004573!5.12e-10!33;UBERON:0004571!5.12e-10!33;UBERON:0000926!1.70e-09!448;UBERON:0004120!1.70e-09!448;UBERON:0006603!1.70e-09!448;UBERON:0001986!1.81e-09!18;UBERON:0004638!1.81e-09!18;UBERON:0004852!1.81e-09!18;UBERON:0000490!2.56e-09!138;UBERON:0002097!3.97e-09!40;UBERON:0002199!5.12e-09!45;UBERON:0002416!5.12e-09!45;UBERON:0000487!5.68e-09!22;UBERON:0006914!1.41e-08!25;UBERON:0003081!1.42e-08!216;UBERON:0000914!4.04e-07!83;UBERON:0002329!4.04e-07!83;UBERON:0003077!4.04e-07!83;UBERON:0003059!4.04e-07!83;UBERON:0007282!4.04e-07!83;UBERON:0009618!4.04e-07!83;UBERON:0007285!4.04e-07!83;UBERON:0000947!4.38e-07!21;UBERON:0010191!4.38e-07!21;UBERON:0004923!7.17e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.64e-12;42!UBERON:0003509;1.64e-12;42!UBERON:0004572;1.64e-12;42!UBERON:0004573;9.94e-12;33!UBERON:0004571;9.94e-12;33!UBERON:0004638;2.33e-10;18!UBERON:0001986;2.33e-10;18!UBERON:0004852;2.33e-10;18!UBERON:0007500;7.45e-10;56!UBERON:0001981;7.45e-10;56!UBERON:0004537;7.45e-10;56!UBERON:0003915;1.37e-09;9!UBERON:0004700;1.37e-09;9!UBERON:0001917;1.37e-09;9!UBERON:0002097;1.74e-09;41!UBERON:0003688;2.23e-09;6!UBERON:0002358;2.23e-09;6!UBERON:0003684;2.23e-09;6!UBERON:0001178;2.23e-09;6!UBERON:0000055;3.22e-09;65!UBERON:0000487;4.94e-09;22!UBERON:0000947;6.50e-09;21!UBERON:0010191;6.50e-09;21!UBERON:0005631;1.32e-08;10!UBERON:0000158;1.32e-08;10!UBERON:0000305;2.45e-08;7!UBERON:0002199;3.76e-08;46!UBERON:0002416;3.76e-08;46!UBERON:0002073;1.35e-07;5!UBERON:0006914;1.67e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.09e-16,68;UBERON:0001637,5.94e-15,42;UBERON:0003509,5.94e-15,42;UBERON:0004572,5.94e-15,42;UBERON:0007500,2.74e-14,59;UBERON:0001981,2.74e-14,59;UBERON:0004537,2.74e-14,59;UBERON:0006965,2.74e-14,59;UBERON:0002049,6.84e-13,78;UBERON:0007798,6.84e-13,78;UBERON:0002199,1.96e-12,46;UBERON:0002416,1.96e-12,46;UBERON:0002097,2.01e-12,41;UBERON:0004872,3.55e-12,83;UBERON:0004573,4.23e-12,33;UBERON:0004571,4.23e-12,33;UBERON:0004638,1.91e-10,18;UBERON:0001986,1.91e-10,18;UBERON:0004852,1.91e-10,18;UBERON:0003915,1.20e-09,9;UBERON:0004700,1.20e-09,9;UBERON:0001917,1.20e-09,9;UBERON:0003102,1.33e-09,99;UBERON:0004535,1.65e-09,109;UBERON:0003688,2.03e-09,6;UBERON:0002358,2.03e-09,6;UBERON:0003684,2.03e-09,6;UBERON:0001178,2.03e-09,6;UBERON:0004871,2.60e-09,8;UBERON:0000487,3.88e-09,22;UBERON:0000947,5.77e-09,21;UBERON:0010191,5.77e-09,21;UBERON:0001009,5.77e-09,112;UBERON:0000305,1.53e-08,7;UBERON:0003914,2.88e-08,117;UBERON:0002073,1.29e-07,5;UBERON:0005086,1.29e-07,5;UBERON:0006914,1.36e-07,25;UBERON:0003081,3.09e-07,203 | |||
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| |||
|short_description=p23@THBS1 | |||
}} |
Revision as of 06:50, 11 September 2013
Short description: | p23@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | 380bp_to_ENST00000560894_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.29e-22 | 76 |
endothelial cell of vascular tree | 2.75e-14 | 24 |
endothelial cell | 1.81e-12 | 36 |
skin fibroblast | 7.80e-11 | 23 |
preadipocyte | 1.09e-10 | 12 |
blood vessel endothelial cell | 1.91e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.91e-10 | 18 |
endothelial cell of artery | 1.20e-09 | 9 |
multi fate stem cell | 3.23e-09 | 427 |
somatic stem cell | 3.89e-09 | 433 |
meso-epithelial cell | 1.03e-08 | 45 |
stem cell | 1.68e-08 | 441 |
mesodermal cell | 4.74e-08 | 121 |
lining cell | 1.11e-07 | 58 |
barrier cell | 1.11e-07 | 58 |
hair follicle cell | 1.29e-07 | 5 |
amnion mesenchymal stem cell | 9.86e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.96e-08 | 5 |
myotonic disease | 5.96e-08 | 5 |
muscle tissue disease | 5.96e-08 | 5 |
myopathy | 5.96e-08 | 5 |
muscular disease | 5.96e-08 | 5 |
myotonic dystrophy | 5.96e-08 | 5 |
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