FFCP PHASE1:Hg19::chr17:18625426..18625454,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=147166|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=32670|TSSclassifier=S|UniProt=B4DWQ8,C9JWX7|association_with_transcript=0bp_to_ENST00000414850,ENST00000424146_5end|description=CAGE_peak_2_at_TRIM16L_5end|id=chr17:18625426..18625454,+|ontology_enrichment_celltype=CL:0002057!3.98e-40!42;CL:0000860!7.53e-37!45;CL:0002194!2.71e-23!63;CL:0000576!2.71e-23!63;CL:0000040!2.71e-23!63;CL:0000559!2.71e-23!63;CL:0002009!2.51e-22!65;CL:0000839!3.73e-20!70;CL:0000557!9.32e-20!71;CL:0000766!2.62e-19!76;CL:0000763!1.86e-14!112;CL:0000049!1.86e-14!112;CL:0000197!1.33e-13!6;CL:0000098!1.33e-13!6;CL:0002167!1.33e-13!6;CL:0000738!4.20e-09!140;CL:0002087!1.04e-08!119;CL:0002031!4.47e-08!124;CL:0002166!1.72e-07!3;CL:0002032!4.22e-07!165;CL:0000837!4.22e-07!165|ontology_enrichment_celltype_v019=CL:0000860;4.49e-55;33!CL:0002057;4.49e-55;33!CL:0000473;3.36e-35;39!CL:0000234;3.36e-35;39!CL:0000576;6.34e-25;48!CL:0000197;5.37e-16;6!CL:0000098;5.37e-16;6!CL:0002167;5.37e-16;6!CL:0000766;3.80e-13;69|ontology_enrichment_celltype_v019_2=CL:0000860,5.37e-45,42;CL:0002057,5.37e-45,42;CL:0000473,1.21e-38,48;CL:0000234,1.21e-38,48;CL:0002194,9.32e-30,59;CL:0000576,9.32e-30,59;CL:0000040,9.32e-30,59;CL:0000559,9.32e-30,59;CL:0002009,1.30e-28,61;CL:0000839,4.78e-26,66;CL:0000557,1.40e-25,67;CL:0000766,1.95e-23,72;CL:0000197,5.30e-16,6;CL:0000098,5.30e-16,6;CL:0002167,5.30e-16,6;CL:0000763,2.40e-15,108;CL:0000049,2.40e-15,108;CL:0002087,1.12e-12,115;CL:0002031,6.25e-12,120;CL:0000738,4.78e-11,136;CL:0002032,1.70e-08,161;CL:0000837,1.70e-08,161;CL:0000037,6.36e-08,168;CL:0000988,2.95e-07,177|ontology_enrichment_development_v019=CL:0002057;4.65e-33;42!UBERON:0008947;2.13e-10;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001737!1.38e-22!9;UBERON:0002371!1.23e-16!80;UBERON:0001474!6.33e-15!86;UBERON:0004765!7.51e-15!101;UBERON:0001434!7.51e-15!101;UBERON:0002390!2.22e-11!102;UBERON:0003061!2.22e-11!102;UBERON:0002204!3.41e-11!167;UBERON:0002193!1.05e-09!112;UBERON:0001557!1.47e-09!19;UBERON:0002405!2.91e-09!115|ontology_enrichment_uberon_v019=UBERON:0001737;1.96e-37;9!UBERON:0001557;1.96e-37;9!UBERON:0000072;1.66e-07;37|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.89e-37,9;UBERON:0002371,6.38e-22,76;UBERON:0004765,2.55e-21,90;UBERON:0001474,6.30e-20,82;UBERON:0001434,1.33e-18,100;UBERON:0002405,6.16e-17,93;UBERON:0001557,8.36e-17,19;UBERON:0002390,8.44e-16,98;UBERON:0003061,8.44e-16,98;UBERON:0002193,7.63e-14,108;UBERON:0002204,7.97e-12,167;UBERON:0003081,9.04e-08,203;UBERON:0008947,1.55e-07,38;UBERON:0003258,1.55e-07,38|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0.602694528023977,2.92124036154949,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0.726991193897824,1.51150377475524,0.485168122375632,2.78914844286822,2.87817521615278,3.09706370895104,2.58923153089935,3.07392847834921,1.6553756092201,0.344745680736619,4.51839278508678,0,0.941211697713023,3.82068610080984,2.24723484445085,1.22433556948361,3.85114832491312,0.639337125799041,0.659702600373432,1.59570926097305,1.27867425159808,2.90209238628584,13.6172453925874,6.85104473895132,3.51748131359441,4.17186334736161,4.56096573880745,1.21079900526674,7.73383035573886,6.0127853613768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05927344650575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0,0,0,1.93975268182574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.8082488026297,11.1265895451547,6.98931986662098,7.72057809126758,6.31850387867978,9.72809538355496,5.52808363456674,6.86775127938711,4.23221872641029,0,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,0,0.463721619900307,1.29149563659404,0,0,0,0,0,0,0,0,1.87467667973554,1.34385702559088,0.708875486211932,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,6.97226766880235,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45579603071565,2.49800584316026,3.46945313074656,0.468565659970853,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.785992328104969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18785872333055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=147166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32670 | |||
|TSSclassifier=S | |||
|UniProt=B4DWQ8,C9JWX7 | |||
|association_with_transcript=0bp_to_ENST00000414850,ENST00000424146_5end | |||
|description=CAGE_peak_2_at_TRIM16L_5end | |||
|id=chr17:18625426..18625454,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.98e-40!42;CL:0000860!7.53e-37!45;CL:0002194!2.71e-23!63;CL:0000576!2.71e-23!63;CL:0000040!2.71e-23!63;CL:0000559!2.71e-23!63;CL:0002009!2.51e-22!65;CL:0000839!3.73e-20!70;CL:0000557!9.32e-20!71;CL:0000766!2.62e-19!76;CL:0000763!1.86e-14!112;CL:0000049!1.86e-14!112;CL:0000197!1.33e-13!6;CL:0000098!1.33e-13!6;CL:0002167!1.33e-13!6;CL:0000738!4.20e-09!140;CL:0002087!1.04e-08!119;CL:0002031!4.47e-08!124;CL:0002166!1.72e-07!3;CL:0002032!4.22e-07!165;CL:0000837!4.22e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.49e-55;33!CL:0002057;4.49e-55;33!CL:0000473;3.36e-35;39!CL:0000234;3.36e-35;39!CL:0000576;6.34e-25;48!CL:0000197;5.37e-16;6!CL:0000098;5.37e-16;6!CL:0002167;5.37e-16;6!CL:0000766;3.80e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.37e-45,42;CL:0002057,5.37e-45,42;CL:0000473,1.21e-38,48;CL:0000234,1.21e-38,48;CL:0002194,9.32e-30,59;CL:0000576,9.32e-30,59;CL:0000040,9.32e-30,59;CL:0000559,9.32e-30,59;CL:0002009,1.30e-28,61;CL:0000839,4.78e-26,66;CL:0000557,1.40e-25,67;CL:0000766,1.95e-23,72;CL:0000197,5.30e-16,6;CL:0000098,5.30e-16,6;CL:0002167,5.30e-16,6;CL:0000763,2.40e-15,108;CL:0000049,2.40e-15,108;CL:0002087,1.12e-12,115;CL:0002031,6.25e-12,120;CL:0000738,4.78e-11,136;CL:0002032,1.70e-08,161;CL:0000837,1.70e-08,161;CL:0000037,6.36e-08,168;CL:0000988,2.95e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;4.65e-33;42!UBERON:0008947;2.13e-10;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.38e-22!9;UBERON:0002371!1.23e-16!80;UBERON:0001474!6.33e-15!86;UBERON:0004765!7.51e-15!101;UBERON:0001434!7.51e-15!101;UBERON:0002390!2.22e-11!102;UBERON:0003061!2.22e-11!102;UBERON:0002204!3.41e-11!167;UBERON:0002193!1.05e-09!112;UBERON:0001557!1.47e-09!19;UBERON:0002405!2.91e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.96e-37;9!UBERON:0001557;1.96e-37;9!UBERON:0000072;1.66e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.89e-37,9;UBERON:0002371,6.38e-22,76;UBERON:0004765,2.55e-21,90;UBERON:0001474,6.30e-20,82;UBERON:0001434,1.33e-18,100;UBERON:0002405,6.16e-17,93;UBERON:0001557,8.36e-17,19;UBERON:0002390,8.44e-16,98;UBERON:0003061,8.44e-16,98;UBERON:0002193,7.63e-14,108;UBERON:0002204,7.97e-12,167;UBERON:0003081,9.04e-08,203;UBERON:0008947,1.55e-07,38;UBERON:0003258,1.55e-07,38 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0.602694528023977,2.92124036154949,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0.726991193897824,1.51150377475524,0.485168122375632,2.78914844286822,2.87817521615278,3.09706370895104,2.58923153089935,3.07392847834921,1.6553756092201,0.344745680736619,4.51839278508678,0,0.941211697713023,3.82068610080984,2.24723484445085,1.22433556948361,3.85114832491312,0.639337125799041,0.659702600373432,1.59570926097305,1.27867425159808,2.90209238628584,13.6172453925874,6.85104473895132,3.51748131359441,4.17186334736161,4.56096573880745,1.21079900526674,7.73383035573886,6.0127853613768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05927344650575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506328996723799,0,0,0,1.93975268182574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.8082488026297,11.1265895451547,6.98931986662098,7.72057809126758,6.31850387867978,9.72809538355496,5.52808363456674,6.86775127938711,4.23221872641029,0,0,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0,0,0,0,0.463721619900307,1.29149563659404,0,0,0,0,0,0,0,0,1.87467667973554,1.34385702559088,0.708875486211932,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,6.97226766880235,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45579603071565,2.49800584316026,3.46945313074656,0.468565659970853,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0.785992328104969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18785872333055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0,0,0,0,0,0,0,0,0,0,0.544017803369474,1.0027595760908,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,0,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,3.85308036908753,0.817826971279221,0,0.245772908753719,0,0,0,0,0,0,1.53867458491389,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@TRIM16L | |||
}} |
Revision as of 12:30, 11 September 2013
Short description: | p2@TRIM16L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TRIM16L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000414850, ENST00000424146_5end |
EntrezGene: | TRIM16L |
HGNC: | 32670 |
UniProt: | B4DWQ8C9JWX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.37e-45 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.37e-45 | 42 |
defensive cell | 1.21e-38 | 48 |
phagocyte | 1.21e-38 | 48 |
monopoietic cell | 9.32e-30 | 59 |
monocyte | 9.32e-30 | 59 |
monoblast | 9.32e-30 | 59 |
promonocyte | 9.32e-30 | 59 |
macrophage dendritic cell progenitor | 1.30e-28 | 61 |
myeloid lineage restricted progenitor cell | 4.78e-26 | 66 |
granulocyte monocyte progenitor cell | 1.40e-25 | 67 |
myeloid leukocyte | 1.95e-23 | 72 |
receptor cell | 5.30e-16 | 6 |
sensory epithelial cell | 5.30e-16 | 6 |
olfactory epithelial cell | 5.30e-16 | 6 |
myeloid cell | 2.40e-15 | 108 |
common myeloid progenitor | 2.40e-15 | 108 |
nongranular leukocyte | 1.12e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 6.25e-12 | 120 |
leukocyte | 4.78e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.70e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-08 | 161 |
hematopoietic stem cell | 6.36e-08 | 168 |
hematopoietic cell | 2.95e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.89e-37 | 9 |
bone marrow | 6.38e-22 | 76 |
skeletal element | 2.55e-21 | 90 |
bone element | 6.30e-20 | 82 |
skeletal system | 1.33e-18 | 100 |
immune system | 6.16e-17 | 93 |
upper respiratory tract | 8.36e-17 | 19 |
hematopoietic system | 8.44e-16 | 98 |
blood island | 8.44e-16 | 98 |
hemolymphoid system | 7.63e-14 | 108 |
musculoskeletal system | 7.97e-12 | 167 |
lateral plate mesoderm | 9.04e-08 | 203 |
respiratory primordium | 1.55e-07 | 38 |
endoderm of foregut | 1.55e-07 | 38 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.