FFCP PHASE1:Hg19::chr17:46675539..46675551,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3216|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=5117|TSSclassifier=S|UniProt=|association_with_transcript=-27bp_to_AB464576,CU677079,DQ890732,HQ447184_5end|coexpression_cluster_id=C3645|description=CAGE_peak_7_at_HOXB6_5end|id=chr17:46675539..46675551,-|ontology_enrichment_celltype=CL:1000449!7.50e-18!16;CL:0002681!2.26e-15!13;CL:0002584!2.26e-15!13;CL:1000497!3.32e-15!18;CL:0002518!3.32e-15!18;CL:1000507!8.08e-14!12;CL:1000494!8.08e-14!12;CL:1000612!9.09e-09!7;CL:1000746!9.09e-09!7|ontology_enrichment_celltype_v019=CL:0002681;1.74e-24;12!CL:0002584;1.74e-24;12!CL:1000449;5.04e-23;15!CL:1000497;5.10e-20;17!CL:0002518;5.10e-20;17!CL:1000746;2.31e-15;7!CL:1000612;2.31e-15;7!CL:1000507;2.41e-14;10!CL:1000494;2.41e-14;10!CL:0000239;9.11e-11;3!CL:1000615;9.11e-11;3!CL:0002306;9.11e-11;3!CL:0002188;1.85e-10;5!CL:0002564;4.54e-10;3!CL:0002521;1.92e-09;3!CL:0002598;6.05e-08;2!CL:0000669;3.49e-07;4!CL:0002602;6.29e-07;2|ontology_enrichment_celltype_v019_2=CL:0002681,1.87e-24,12;CL:0002584,1.87e-24,12;CL:1000449,4.87e-23,15;CL:1000497,4.94e-20,17;CL:0002518,4.94e-20,17;CL:1000746,2.51e-15,7;CL:1000612,2.51e-15,7;CL:1000507,2.18e-14,10;CL:1000494,2.18e-14,10;CL:0000239,9.76e-11,3;CL:1000615,9.76e-11,3;CL:0002306,9.76e-11,3;CL:0002188,2.00e-10,5;CL:0002564,3.56e-10,3;CL:0002521,3.64e-09,3;CL:0002598,6.27e-08,2;CL:0000669,3.78e-07,4;CL:0002602,4.24e-07,2|ontology_enrichment_development_v019=UBERON:0007297;9.71e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!2.02e-21!32;UBERON:0000058!9.16e-21!26;UBERON:0000080!3.17e-20!18;UBERON:0002120!3.17e-20!18;UBERON:0004875!3.17e-20!18;UBERON:0005721!3.17e-20!18;UBERON:0005754!3.17e-20!18;UBERON:0007297!3.17e-20!18;UBERON:0002113!2.50e-19!27;UBERON:0003918!2.50e-19!27;UBERON:0005095!2.50e-19!27;UBERON:0007687!2.50e-19!27;UBERON:0006555!5.40e-19!17;UBERON:0005103!5.40e-19!17;UBERON:0000083!5.40e-19!17;UBERON:0009201!5.40e-19!17;UBERON:0004819!5.40e-19!17;UBERON:0006553!5.40e-19!17;UBERON:0003074!5.40e-19!17;UBERON:0003060!5.40e-19!17;UBERON:0003887!5.81e-18!21;UBERON:0004211!7.50e-18!16;UBERON:0001285!7.50e-18!16;UBERON:0007684!7.50e-18!16;UBERON:0003220!7.50e-18!16;UBERON:0004208!7.50e-18!16;UBERON:0004876!1.66e-17!20;UBERON:0000353!7.51e-16!17;UBERON:0001225!2.26e-15!13;UBERON:0008987!2.26e-15!13;UBERON:0009773!8.08e-14!12;UBERON:0001231!8.08e-14!12;UBERON:0004810!8.08e-14!12;UBERON:0006554!2.29e-13!44;UBERON:0002417!3.51e-13!61;UBERON:0000916!3.51e-13!61;UBERON:0005177!6.62e-13!107;UBERON:0001008!7.31e-13!45;UBERON:0002100!1.43e-12!216;UBERON:0009569!1.84e-12!113;UBERON:0001851!1.29e-11!16;UBERON:0005172!1.62e-11!55;UBERON:0005173!1.62e-11!55;UBERON:0003064!5.07e-11!37;UBERON:0003886!7.29e-10!63;UBERON:0000466!6.65e-09!126;UBERON:0000074!9.09e-09!7;UBERON:0001229!9.09e-09!7;UBERON:0001230!9.09e-09!7;UBERON:0005749!9.09e-09!7;UBERON:0004199!9.09e-09!7;UBERON:0004209!9.09e-09!7;UBERON:0004198!9.09e-09!7;UBERON:0000464!1.32e-08!104;UBERON:0003104!5.54e-08!238;UBERON:0009142!5.54e-08!238;UBERON:0002553!6.07e-08!70;UBERON:0005256!3.01e-07!143;UBERON:0003103!6.88e-07!69;UBERON:0003586!7.43e-07!5|ontology_enrichment_uberon_v019=UBERON:0001225;1.74e-24;12!UBERON:0008987;1.74e-24;12!UBERON:0000489;3.03e-23;29!UBERON:0006555;5.04e-23;15!UBERON:0000353;5.04e-23;15!UBERON:0004819;5.04e-23;15!UBERON:0001285;5.04e-23;15!UBERON:0007684;5.04e-23;15!UBERON:0002113;5.40e-22;24!UBERON:0011143;5.40e-22;24!UBERON:0001851;3.75e-19;15!UBERON:0006554;6.64e-17;30!UBERON:0001008;6.64e-17;30!UBERON:0000074;2.31e-15;7!UBERON:0001229;2.31e-15;7!UBERON:0011135;2.61e-15;5!UBERON:0002216;2.61e-15;5!UBERON:0011134;2.61e-15;5!UBERON:0002209;2.61e-15;5!UBERON:0002213;2.61e-15;5!UBERON:0007844;2.61e-15;5!UBERON:0011138;2.61e-15;5!UBERON:0001130;2.61e-15;5!UBERON:0001066;2.61e-15;5!UBERON:0001468;2.61e-15;5!UBERON:0004211;2.41e-14;10!UBERON:0009773;2.41e-14;10!UBERON:0001231;2.41e-14;10!UBERON:0004810;2.41e-14;10!UBERON:0004905;3.54e-13;8!UBERON:0000982;3.54e-13;8!UBERON:0004770;3.54e-13;8!UBERON:0006947;6.29e-11;3!UBERON:0004054;6.29e-11;3!UBERON:0006853;9.11e-11;3!UBERON:0007685;9.11e-11;3!UBERON:0004134;9.11e-11;3!UBERON:0002242;4.54e-10;3!UBERON:0002072;1.44e-09;5!UBERON:0002190;1.92e-09;3!UBERON:0005904;2.81e-08;4!UBERON:0000058;6.14e-08;10!UBERON:0005172;4.59e-07;52!UBERON:0005173;4.59e-07;52!UBERON:0006444;6.29e-07;2!UBERON:0001995;6.29e-07;2!UBERON:0004715;6.29e-07;2!UBERON:0004175;7.58e-07;21|ontology_enrichment_uberon_v019_2=UBERON:0000489,4.23e-28,31;UBERON:0002113,4.17e-27,26;UBERON:0003918,4.17e-27,26;UBERON:0011143,4.17e-27,26;UBERON:0005095,4.17e-27,26;UBERON:0007687,4.17e-27,26;UBERON:0006555,9.98e-26,16;UBERON:0004819,9.98e-26,16;UBERON:0001225,1.87e-24,12;UBERON:0008987,1.87e-24,12;UBERON:0004211,4.87e-23,15;UBERON:0009773,4.87e-23,15;UBERON:0001231,4.87e-23,15;UBERON:0001285,4.87e-23,15;UBERON:0007684,4.87e-23,15;UBERON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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3216 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5117 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-27bp_to_AB464576,CU677079,DQ890732,HQ447184_5end | |||
|coexpression_cluster_id=C3645 | |||
|description=CAGE_peak_7_at_HOXB6_5end | |||
|id=chr17:46675539..46675551,- | |||
|ontology_enrichment_celltype=CL:1000449!7.50e-18!16;CL:0002681!2.26e-15!13;CL:0002584!2.26e-15!13;CL:1000497!3.32e-15!18;CL:0002518!3.32e-15!18;CL:1000507!8.08e-14!12;CL:1000494!8.08e-14!12;CL:1000612!9.09e-09!7;CL:1000746!9.09e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0002681;1.74e-24;12!CL:0002584;1.74e-24;12!CL:1000449;5.04e-23;15!CL:1000497;5.10e-20;17!CL:0002518;5.10e-20;17!CL:1000746;2.31e-15;7!CL:1000612;2.31e-15;7!CL:1000507;2.41e-14;10!CL:1000494;2.41e-14;10!CL:0000239;9.11e-11;3!CL:1000615;9.11e-11;3!CL:0002306;9.11e-11;3!CL:0002188;1.85e-10;5!CL:0002564;4.54e-10;3!CL:0002521;1.92e-09;3!CL:0002598;6.05e-08;2!CL:0000669;3.49e-07;4!CL:0002602;6.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002681,1.87e-24,12;CL:0002584,1.87e-24,12;CL:1000449,4.87e-23,15;CL:1000497,4.94e-20,17;CL:0002518,4.94e-20,17;CL:1000746,2.51e-15,7;CL:1000612,2.51e-15,7;CL:1000507,2.18e-14,10;CL:1000494,2.18e-14,10;CL:0000239,9.76e-11,3;CL:1000615,9.76e-11,3;CL:0002306,9.76e-11,3;CL:0002188,2.00e-10,5;CL:0002564,3.56e-10,3;CL:0002521,3.64e-09,3;CL:0002598,6.27e-08,2;CL:0000669,3.78e-07,4;CL:0002602,4.24e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;9.71e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001225;1.74e-24;12!UBERON:0008987;1.74e-24;12!UBERON:0000489;3.03e-23;29!UBERON:0006555;5.04e-23;15!UBERON:0000353;5.04e-23;15!UBERON:0004819;5.04e-23;15!UBERON:0001285;5.04e-23;15!UBERON:0007684;5.04e-23;15!UBERON:0002113;5.40e-22;24!UBERON:0011143;5.40e-22;24!UBERON:0001851;3.75e-19;15!UBERON:0006554;6.64e-17;30!UBERON:0001008;6.64e-17;30!UBERON:0000074;2.31e-15;7!UBERON:0001229;2.31e-15;7!UBERON:0011135;2.61e-15;5!UBERON:0002216;2.61e-15;5!UBERON:0011134;2.61e-15;5!UBERON:0002209;2.61e-15;5!UBERON:0002213;2.61e-15;5!UBERON:0007844;2.61e-15;5!UBERON:0011138;2.61e-15;5!UBERON:0001130;2.61e-15;5!UBERON:0001066;2.61e-15;5!UBERON:0001468;2.61e-15;5!UBERON:0004211;2.41e-14;10!UBERON:0009773;2.41e-14;10!UBERON:0001231;2.41e-14;10!UBERON:0004810;2.41e-14;10!UBERON:0004905;3.54e-13;8!UBERON:0000982;3.54e-13;8!UBERON:0004770;3.54e-13;8!UBERON:0006947;6.29e-11;3!UBERON:0004054;6.29e-11;3!UBERON:0006853;9.11e-11;3!UBERON:0007685;9.11e-11;3!UBERON:0004134;9.11e-11;3!UBERON:0002242;4.54e-10;3!UBERON:0002072;1.44e-09;5!UBERON:0002190;1.92e-09;3!UBERON:0005904;2.81e-08;4!UBERON:0000058;6.14e-08;10!UBERON:0005172;4.59e-07;52!UBERON:0005173;4.59e-07;52!UBERON:0006444;6.29e-07;2!UBERON:0001995;6.29e-07;2!UBERON:0004715;6.29e-07;2!UBERON:0004175;7.58e-07;21 | |||
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|phase1_expression=0,0.642301571672949,0.281908808191942,0,1.34088328328186,0,2.53299878168311,1.26343974685366,1.04474251279935,9.33788958705734,1.39560233594486,0,0.263766978228454,2.22779435328084,1.98838425436749,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.417989933073621,0.258416759169329,0.71153252537342,0.33472061276467,0,0.760272105718513,0.976248230192678,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.896692083310806,3.40560046066918,2.75184005425824,4.6348766211742,0,0,0,0,0,0,6.46756327634615,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.337552664482532,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0.721879481669586,0.354920400119532,0,0.241011029883482,0,0,0,0,0,0.38474715694639,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0,0,0,2.83698264046557,0,0,0,1.64648067356154,0,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.71768088406796,11.0037514633129,2.17012018959788,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0.184369168541703,0,2.15381273209015,0.686286847621712,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0.640695746278505,0,1.44768529029247,0,1.54209693802656,0.177561725313127,1.31403449622095,0.519254429183621,0.813472649219715,0.120859449591622,0,0,0,0,0,2.70719767744447,0.770153371044148,0.784349769176855,1.46139224653261,0.422206515571503,3.4120015221269,4.59253004246592,0.647747748306418,4.62681758070868,1.35473218771926,1.50506932156456,5.60727800699084,4.15538004464362,4.47749509444357,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0.616194468458578,0.307007349452259,0,0,0,0.340906509664404,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,19.960027722284,5.13526785640705,0,0,0.539617372749944,0.274537029736055,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,1.43411352204052,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0.561594356226918,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,3.97790605528978,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,1.43789361835723,0,0,0.295930216910801,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,18.5454669339214,0,0,0,0.300646838828985,1.9700756365477,0,0,0.627865836814451,0,3.41531455235751,0.832048038078832,0,0,0.0870592065804026,3.84398670132466,0.859930162358083,0.0967563312890851,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0.977756913674015,0,0,0,0.432271251462318,2.29073192331831,1.71594997861965,0,0.49701014226173,0,1.35904206073614,1.04602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0.795229689809303,0,0,0,0,0,0,0,0,1.81253126788156,3.72427575758487,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0.339936274560377,0.146552233678082,0,0,0,0,0,0.427149650270779,0.314408610199332,0.414239055347196,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0.434674820589684,0,0,0.151649117541648,0,0.470531639396343,0,0.579684114443301,1.04478362020812,0,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0.53168342911599,0,0,0,0.406870733204662,0,0.107410557042488,0,0,1.20008329398946,0.343395705182793,0.673498977531838,0,0,0,0,0,0.463044948647668,0.244736704506468,0.179088841081487,0,0,3.53378291891762,0,0,0,0,0,0,0,0,0,0,0,4.01493034381391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.20513673456923,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0.222462803784138,0.941917114206168,0,0.560544326627578,0,0,0,0,0,0.348724276104376,0.695433089210318,0,0,0,0,0,0.118332000730565,0.255640214277473,17.782256108019,0,3.72247662797184,5.7332336338646,0,3.92600934460972,0,0,0,0,0.971421986118279,16.1418229788853,1.39265542612958,0.118920090777569,0,0,1.66059127923341,0.154348316215889,0.218559560503957,1.88126918544609,0,2.59244201811789,1.37415926980462,0.297046400327086,2.113278637917,0,0,0.193373663920732,0,0,0,0,0,0,0,1.10440093535229,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426909383510862,0,3.77265848847665,0,0.366724332548599,0,0,0,0 | |||
|short_description=p7@HOXB6 | |||
}} |
Revision as of 14:15, 11 September 2013
Short description: | p7@HOXB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_HOXB6_5end |
Coexpression cluster: | C3645_ductus_seminal_alveolar_endometrial_Smooth_small_nonsmall |
Association with transcript: | -27bp_to_AB464576, CU677079, DQ890732, HQ447184_5end |
EntrezGene: | HOXB6 |
HGNC: | 5117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cortical cell | 1.87e-24 | 12 |
renal cortical epithelial cell | 1.87e-24 | 12 |
epithelial cell of nephron | 4.87e-23 | 15 |
kidney cell | 4.94e-20 | 17 |
kidney epithelial cell | 4.94e-20 | 17 |
glomerular cell | 2.51e-15 | 7 |
kidney corpuscule cell | 2.51e-15 | 7 |
kidney tubule cell | 2.18e-14 | 10 |
nephron tubule epithelial cell | 2.18e-14 | 10 |
brush border epithelial cell | 9.76e-11 | 3 |
kidney cortex tubule cell | 9.76e-11 | 3 |
epithelial cell of proximal tubule | 9.76e-11 | 3 |
glomerular endothelial cell | 2.00e-10 | 5 |
nucleus pulposus cell of intervertebral disc | 3.56e-10 | 3 |
subcutaneous fat cell | 3.64e-09 | 3 |
bronchial smooth muscle cell | 6.27e-08 | 2 |
pericyte cell | 3.78e-07 | 4 |
annulus pulposus cell | 4.24e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.