FFCP PHASE1:Hg19::chr17:79359048..79359058,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C327|description=CAGE_peak_at_chr17:79359048..79359058,-|id=chr17:79359048..79359058,-|ontology_enrichment_celltype=CL:0000148!3.24e-19!10;CL:0000541!3.24e-19!10;CL:0000147!4.39e-17!14;CL:0002567!4.71e-13!3;CL:0000710!1.67e-11!20;CL:0000075!3.74e-08!27|ontology_enrichment_celltype_v019=CL:0000148;2.49e-69;10!CL:0000147;1.82e-49;14!CL:0002567;1.07e-43;3!CL:0000710;1.51e-34;20!CL:0000075;1.67e-25;27!CL:0002077;7.73e-18;34!CL:0002566;8.63e-16;1|ontology_enrichment_celltype_v019_2=CL:0000148,2.76e-69,10;CL:0000541,2.76e-69,10;CL:0000147,1.96e-49,14;CL:0002567,9.28e-44,3;CL:0000710,1.59e-34,20;CL:0000075,1.73e-25,27;CL:0002077,3.68e-20,34;CL:0002566,7.46e-16,1;CL:0000333,7.51e-16,41;CL:0000133,4.97e-11,59;CL:0000221,5.35e-09,72|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1909!3.58e-09!2|ontology_enrichment_disease_v019=DOID:1909;1.92e-29;2|ontology_enrichment_disease_v019_2=DOID:1909,1.92e-29,2|ontology_enrichment_uberon=UBERON:0001049!3.76e-61!57;UBERON:0005068!3.76e-61!57;UBERON:0006241!3.76e-61!57;UBERON:0007135!3.76e-61!57;UBERON:0005743!1.53e-54!86;UBERON:0001017!3.83e-51!82;UBERON:0002020!6.16e-50!34;UBERON:0003528!6.16e-50!34;UBERON:0001893!6.46e-50!34;UBERON:0003075!4.45e-49!86;UBERON:0007284!4.45e-49!86;UBERON:0000073!1.28e-48!94;UBERON:0001016!1.28e-48!94;UBERON:0002780!1.33e-48!41;UBERON:0001890!1.33e-48!41;UBERON:0006240!1.33e-48!41;UBERON:0002616!6.12e-48!59;UBERON:0003080!2.54e-47!42;UBERON:0002791!3.72e-47!33;UBERON:0002346!1.58e-46!90;UBERON:0000955!1.97e-45!69;UBERON:0006238!1.97e-45!69;UBERON:0001869!8.84e-44!32;UBERON:0007023!1.57e-39!115;UBERON:0003056!1.29e-36!61;UBERON:0002308!7.61e-32!9;UBERON:0000125!7.61e-32!9;UBERON:0002619!3.81e-28!22;UBERON:0000033!7.86e-28!123;UBERON:0004121!1.04e-26!169;UBERON:0000153!3.64e-26!129;UBERON:0007811!3.64e-26!129;UBERON:0000924!6.97e-26!173;UBERON:0006601!6.97e-26!173;UBERON:0002420!3.33e-25!9;UBERON:0007245!3.33e-25!9;UBERON:0010009!3.33e-25!9;UBERON:0010011!3.33e-25!9;UBERON:0000454!3.33e-25!9;UBERON:0009663!3.50e-25!7;UBERON:0000956!1.62e-24!25;UBERON:0000203!1.62e-24!25;UBERON:0001950!9.35e-23!20;UBERON:0002298!3.05e-16!8;UBERON:0000200!4.81e-15!6;UBERON:0000369!5.26e-15!4;UBERON:0002435!5.26e-15!4;UBERON:0000204!5.26e-15!4;UBERON:0010082!5.26e-15!4;UBERON:0003076!1.97e-14!15;UBERON:0003057!1.97e-14!15;UBERON:0000025!1.57e-13!194;UBERON:0000349!4.11e-12!5;UBERON:0002771!7.37e-12!3;UBERON:0006331!9.56e-12!3;UBERON:0000988!1.33e-11!3;UBERON:0001871!1.66e-11!7;UBERON:0002240!1.92e-11!3;UBERON:0005383!1.92e-11!3;UBERON:0005382!1.92e-11!3;UBERON:0000483!9.15e-10!309;UBERON:0000119!1.38e-09!312;UBERON:0004111!2.21e-09!241;UBERON:0001875!1.49e-08!2;UBERON:0006514!1.49e-08!2;UBERON:0001873!2.09e-08!2;UBERON:0010122!2.09e-08!2;UBERON:0002148!2.25e-08!2;UBERON:0009662!2.25e-08!2;UBERON:0001954!3.38e-08!2;UBERON:0003022!3.38e-08!2;UBERON:0002421!3.38e-08!2;UBERON:0002600!3.38e-08!2;UBERON:0002360!6.28e-08!2;UBERON:0000094!6.28e-08!2;UBERON:0007645!6.28e-08!2;UBERON:0004733!1.55e-07!12;UBERON:0002028!1.55e-07!12;UBERON:0007277!1.55e-07!12;UBERON:0000477!2.05e-07!286;UBERON:0002021!3.05e-07!5;UBERON:0000064!4.65e-07!219;UBERON:0005174!4.89e-07!5;UBERON:0001137!4.89e-07!5;UBERON:0000475!5.55e-07!365;UBERON:0004732!6.23e-07!13|ontology_enrichment_uberon_v019=UBERON:0002336;2.75e-15;1!UBERON:0011215;2.75e-15;1!UBERON:0001018;2.75e-15;1!UBERON:0002473;2.75e-15;1!UBERON:0005340;2.75e-15;1!UBERON:0003544;2.75e-15;1!UBERON:0005970;2.75e-15;1!UBERON:0002316;2.75e-15;1!UBERON:0001020;2.75e-15;1!UBERON:0002437;2.75e-15;1!UBERON:0001875;2.67e-08;2!UBERON:0005162;2.67e-08;2!UBERON:0000122;2.67e-08;2!UBERON:0006514;2.67e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0002336,2.38e-15,1;UBERON:0011215,2.38e-15,1;UBERON:0001018,2.38e-15,1;UBERON:0002473,2.38e-15,1;UBERON:0005340,2.38e-15,1;UBERON:0003544,2.38e-15,1;UBERON:0005970,2.38e-15,1;UBERON:0002316,2.38e-15,1;UBERON:0001020,2.38e-15,1;UBERON:0002437,2.38e-15,1;UBERON:0005162,2.48e-08,2;UBERON:0000122,2.48e-08,2;UBERON:0001875,2.87e-08,2;UBERON:0006514,2.87e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4923841860693,3.4378958300245,3.51652341630141,3.4214489204541,3.08482478109971,2.10240140490742,2.00078502841405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_at_chr17:79359048..79359058,- | |||
|id=chr17:79359048..79359058,- | |||
|ontology_enrichment_celltype=CL:0000148!3.24e-19!10;CL:0000541!3.24e-19!10;CL:0000147!4.39e-17!14;CL:0002567!4.71e-13!3;CL:0000710!1.67e-11!20;CL:0000075!3.74e-08!27 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.49e-69;10!CL:0000147;1.82e-49;14!CL:0002567;1.07e-43;3!CL:0000710;1.51e-34;20!CL:0000075;1.67e-25;27!CL:0002077;7.73e-18;34!CL:0002566;8.63e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.76e-69,10;CL:0000541,2.76e-69,10;CL:0000147,1.96e-49,14;CL:0002567,9.28e-44,3;CL:0000710,1.59e-34,20;CL:0000075,1.73e-25,27;CL:0002077,3.68e-20,34;CL:0002566,7.46e-16,1;CL:0000333,7.51e-16,41;CL:0000133,4.97e-11,59;CL:0000221,5.35e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!3.58e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.92e-29;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.92e-29,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.76e-61!57;UBERON:0005068!3.76e-61!57;UBERON:0006241!3.76e-61!57;UBERON:0007135!3.76e-61!57;UBERON:0005743!1.53e-54!86;UBERON:0001017!3.83e-51!82;UBERON:0002020!6.16e-50!34;UBERON:0003528!6.16e-50!34;UBERON:0001893!6.46e-50!34;UBERON:0003075!4.45e-49!86;UBERON:0007284!4.45e-49!86;UBERON:0000073!1.28e-48!94;UBERON:0001016!1.28e-48!94;UBERON:0002780!1.33e-48!41;UBERON:0001890!1.33e-48!41;UBERON:0006240!1.33e-48!41;UBERON:0002616!6.12e-48!59;UBERON:0003080!2.54e-47!42;UBERON:0002791!3.72e-47!33;UBERON:0002346!1.58e-46!90;UBERON:0000955!1.97e-45!69;UBERON:0006238!1.97e-45!69;UBERON:0001869!8.84e-44!32;UBERON:0007023!1.57e-39!115;UBERON:0003056!1.29e-36!61;UBERON:0002308!7.61e-32!9;UBERON:0000125!7.61e-32!9;UBERON:0002619!3.81e-28!22;UBERON:0000033!7.86e-28!123;UBERON:0004121!1.04e-26!169;UBERON:0000153!3.64e-26!129;UBERON:0007811!3.64e-26!129;UBERON:0000924!6.97e-26!173;UBERON:0006601!6.97e-26!173;UBERON:0002420!3.33e-25!9;UBERON:0007245!3.33e-25!9;UBERON:0010009!3.33e-25!9;UBERON:0010011!3.33e-25!9;UBERON:0000454!3.33e-25!9;UBERON:0009663!3.50e-25!7;UBERON:0000956!1.62e-24!25;UBERON:0000203!1.62e-24!25;UBERON:0001950!9.35e-23!20;UBERON:0002298!3.05e-16!8;UBERON:0000200!4.81e-15!6;UBERON:0000369!5.26e-15!4;UBERON:0002435!5.26e-15!4;UBERON:0000204!5.26e-15!4;UBERON:0010082!5.26e-15!4;UBERON:0003076!1.97e-14!15;UBERON:0003057!1.97e-14!15;UBERON:0000025!1.57e-13!194;UBERON:0000349!4.11e-12!5;UBERON:0002771!7.37e-12!3;UBERON:0006331!9.56e-12!3;UBERON:0000988!1.33e-11!3;UBERON:0001871!1.66e-11!7;UBERON:0002240!1.92e-11!3;UBERON:0005383!1.92e-11!3;UBERON:0005382!1.92e-11!3;UBERON:0000483!9.15e-10!309;UBERON:0000119!1.38e-09!312;UBERON:0004111!2.21e-09!241;UBERON:0001875!1.49e-08!2;UBERON:0006514!1.49e-08!2;UBERON:0001873!2.09e-08!2;UBERON:0010122!2.09e-08!2;UBERON:0002148!2.25e-08!2;UBERON:0009662!2.25e-08!2;UBERON:0001954!3.38e-08!2;UBERON:0003022!3.38e-08!2;UBERON:0002421!3.38e-08!2;UBERON:0002600!3.38e-08!2;UBERON:0002360!6.28e-08!2;UBERON:0000094!6.28e-08!2;UBERON:0007645!6.28e-08!2;UBERON:0004733!1.55e-07!12;UBERON:0002028!1.55e-07!12;UBERON:0007277!1.55e-07!12;UBERON:0000477!2.05e-07!286;UBERON:0002021!3.05e-07!5;UBERON:0000064!4.65e-07!219;UBERON:0005174!4.89e-07!5;UBERON:0001137!4.89e-07!5;UBERON:0000475!5.55e-07!365;UBERON:0004732!6.23e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;2.75e-15;1!UBERON:0011215;2.75e-15;1!UBERON:0001018;2.75e-15;1!UBERON:0002473;2.75e-15;1!UBERON:0005340;2.75e-15;1!UBERON:0003544;2.75e-15;1!UBERON:0005970;2.75e-15;1!UBERON:0002316;2.75e-15;1!UBERON:0001020;2.75e-15;1!UBERON:0002437;2.75e-15;1!UBERON:0001875;2.67e-08;2!UBERON:0005162;2.67e-08;2!UBERON:0000122;2.67e-08;2!UBERON:0006514;2.67e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,2.38e-15,1;UBERON:0011215,2.38e-15,1;UBERON:0001018,2.38e-15,1;UBERON:0002473,2.38e-15,1;UBERON:0005340,2.38e-15,1;UBERON:0003544,2.38e-15,1;UBERON:0005970,2.38e-15,1;UBERON:0002316,2.38e-15,1;UBERON:0001020,2.38e-15,1;UBERON:0002437,2.38e-15,1;UBERON:0005162,2.48e-08,2;UBERON:0000122,2.48e-08,2;UBERON:0001875,2.87e-08,2;UBERON:0006514,2.87e-08,2 | |||
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|short_description=p@chr17:79359048..79359058,- | |||
}} |
Revision as of 16:24, 11 September 2013
Short description: | p@chr17:79359048..79359058, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:79359048..79359058, - |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.76e-69 | 10 |
melanoblast | 2.76e-69 | 10 |
pigment cell | 1.96e-49 | 14 |
light melanocyte | 9.28e-44 | 3 |
neurecto-epithelial cell | 1.59e-34 | 20 |
columnar/cuboidal epithelial cell | 1.73e-25 | 27 |
ecto-epithelial cell | 3.68e-20 | 34 |
dark melanocyte | 7.46e-16 | 1 |
migratory neural crest cell | 7.51e-16 | 41 |
neurectodermal cell | 4.97e-11 | 59 |
ectodermal cell | 5.35e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 2.38e-15 | 1 |
central nervous system cell part cluster | 2.38e-15 | 1 |
axon tract | 2.38e-15 | 1 |
intercerebral commissure | 2.38e-15 | 1 |
dorsal telencephalic commissure | 2.38e-15 | 1 |
brain white matter | 2.38e-15 | 1 |
brain commissure | 2.38e-15 | 1 |
white matter | 2.38e-15 | 1 |
nervous system commissure | 2.38e-15 | 1 |
cerebral hemisphere white matter | 2.38e-15 | 1 |
multi cell component structure | 2.48e-08 | 2 |
neuron projection bundle | 2.48e-08 | 2 |
globus pallidus | 2.87e-08 | 2 |
pallidum | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.92e-29 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.