FFCP PHASE1:Hg19::chr1:205313388..205313421,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55220|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25573|TSSclassifier=S|UniProt=|association_with_transcript=-78bp_to_ENST00000539253_5end|coexpression_cluster_id=C24|description=CAGE_peak_3_at_KLHDC8A_5end|id=chr1:205313388..205313421,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;1.46e-14;2!CL:0000764;3.52e-14;2!CL:0000558;3.52e-14;2|ontology_enrichment_celltype_v019_2=CL:0000764,2.21e-14,2;CL:0000765,2.21e-14,2;CL:0000050,2.21e-14,2;CL:0000038,2.21e-14,2;CL:0000558,2.21e-14,2;CL:0000547,2.21e-14,2;CL:0000549,2.21e-14,2;CL:0000550,2.21e-14,2;CL:0000552,2.21e-14,2|ontology_enrichment_development_v019=UBERON:0006215;9.28e-21;3!UBERON:0006222;6.18e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.51e-45!57;UBERON:0005068!3.51e-45!57;UBERON:0006241!3.51e-45!57;UBERON:0007135!3.51e-45!57;UBERON:0007023!3.33e-44!115;UBERON:0005743!1.49e-42!86;UBERON:0000073!3.63e-41!94;UBERON:0001016!3.63e-41!94;UBERON:0002616!1.80e-40!59;UBERON:0001017!1.92e-39!82;UBERON:0003075!1.41e-35!86;UBERON:0007284!1.41e-35!86;UBERON:0000955!5.50e-34!69;UBERON:0006238!5.50e-34!69;UBERON:0002346!2.29e-33!90;UBERON:0002780!1.95e-32!41;UBERON:0001890!1.95e-32!41;UBERON:0006240!1.95e-32!41;UBERON:0003080!1.85e-31!42;UBERON:0003056!4.46e-27!61;UBERON:0000153!1.51e-24!129;UBERON:0007811!1.51e-24!129;UBERON:0000033!6.22e-24!123;UBERON:0004121!2.25e-23!169;UBERON:0002020!1.15e-22!34;UBERON:0003528!1.15e-22!34;UBERON:0000924!1.88e-22!173;UBERON:0006601!1.88e-22!173;UBERON:0001893!4.18e-22!34;UBERON:0001869!6.80e-22!32;UBERON:0002791!8.74e-21!33;UBERON:0002619!6.10e-18!22;UBERON:0001950!8.26e-18!20;UBERON:0000956!2.35e-17!25;UBERON:0000203!2.35e-17!25;UBERON:0003076!1.34e-14!15;UBERON:0003057!1.34e-14!15;UBERON:0001894!2.77e-13!7;UBERON:0006222!2.77e-13!7;UBERON:0004733!1.07e-12!12;UBERON:0002028!1.07e-12!12;UBERON:0007277!1.07e-12!12;UBERON:0004732!1.51e-11!13;UBERON:0000025!4.27e-11!194;UBERON:0000200!3.40e-10!6;UBERON:0001871!4.56e-10!7;UBERON:0002298!8.66e-09!8;UBERON:0004111!1.03e-08!241;UBERON:0000064!1.19e-08!219;UBERON:0000477!1.84e-08!286;UBERON:0003296!1.89e-08!4;UBERON:0010133!1.89e-08!4;UBERON:0002680!3.74e-08!9;UBERON:0001895!3.74e-08!9;UBERON:0010092!3.74e-08!9;UBERON:0000922!1.12e-07!612;UBERON:0000988!4.11e-07!3;UBERON:0000468!6.32e-07!659;UBERON:0000483!9.18e-07!309;UBERON:0002308!9.30e-07!9;UBERON:0000125!9.30e-07!9|ontology_enrichment_uberon_v019=UBERON:0004733;1.48e-26;12!UBERON:0002028;1.48e-26;12!UBERON:0002680;2.01e-26;9!UBERON:0001895;2.01e-26;9!UBERON:0004732;1.87e-24;13!UBERON:0000988;7.08e-21;3!UBERON:0002298;3.95e-18;6!UBERON:0001905;2.79e-15;2!UBERON:0002757;2.79e-15;2!UBERON:0010134;2.79e-15;2!UBERON:0005408;2.79e-15;2!UBERON:0001899;2.79e-15;2!UBERON:0002148;3.52e-14;2!UBERON:0006331;3.52e-14;2!UBERON:0009662;3.52e-14;2!UBERON:0000178;4.14e-11;15!UBERON:0000179;4.14e-11;15!UBERON:0000463;4.14e-11;15!UBERON:0002037;1.17e-10;6!UBERON:0001894;1.68e-09;7!UBERON:0000073;4.24e-09;53!UBERON:0002616;4.24e-09;53!UBERON:0007023;8.13e-09;114!UBERON:0001016;4.22e-08;83!UBERON:0003296;4.55e-08;4!UBERON:0010133;4.55e-08;4!UBERON:0002784;4.55e-08;4!UBERON:0000955;5.77e-08;68!UBERON:0002372;6.18e-08;1!UBERON:0001961;6.18e-08;1!UBERON:0001744;6.18e-08;1!UBERON:0001042;6.18e-08;1!UBERON:0001735;6.18e-08;1!UBERON:0000125;3.89e-07;9!UBERON:0002308;3.89e-07;9!UBERON:0001017;5.60e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0003076,2.36e-27,15;UBERON:0003057,2.36e-27,15;UBERON:0004733,1.38e-26,12;UBERON:0002028,1.38e-26,12;UBERON:0007277,1.38e-26,12;UBERON:0002680,2.32e-26,9;UBERON:0001895,2.32e-26,9;UBERON:0010092,2.32e-26,9;UBERON:0004732,1.75e-24,13;UBERON:0007023,2.54e-24,114;UBERON:0000988,1.96e-20,3;UBERON:0002298,6.18e-18,6;UBERON:0001016,1.02e-17,89;UBERON:0001049,2.29e-17,56;UBERON:0005068,2.29e-17,56;UBERON:0006241,2.29e-17,56;UBERON:0007135,2.29e-17,56;UBERON:0000073,1.11e-15,53;UBERON:0002616,1.11e-15,53;UBERON:0001905,2.80e-15,2;UBERON:0002757,2.80e-15,2;UBERON:0010134,2.80e-15,2;UBERON:0005408,2.80e-15,2;UBERON:0001899,2.80e-15,2;UBERON:0001017,3.45e-15,81;UBERON:0002148,9.59e-14,2;UBERON:0006331,9.59e-14,2;UBERON:0009662,9.59e-14,2;UBERON:0000955,1.38e-11,68;UBERON:0006238,1.38e-11,68;UBERON:0000178,3.34e-11,15;UBERON:0000179,3.34e-11,15;UBERON:0000463,3.34e-11,15;UBERON:0003075,3.75e-11,82;UBERON:0007284,3.75e-11,82;UBERON:0002037,7.90e-11,6;UBERON:0006215,7.90e-11,6;UBERON:0002346,1.58e-10,86;UBERON:0004121,3.57e-10,171;UBERON:0000924,3.57e-10,171;UBERON:0006601,3.57e-10,171;UBERON:0001894,2.06e-09,7;UBERON:0006222,2.06e-09,7;UBERON:0010371,2.63e-08,104;UBERON:0003296,4.56e-08,4;UBERON:0010133,4.56e-08,4;UBERON:0002784,4.56e-08,4;UBERON:0002372,6.19e-08,1;UBERON:0001961,6.19e-08,1;UBERON:0001744,6.19e-08,1;UBERON:0001735,6.19e-08,1;UBERON:0011216,6.94e-08,223;UBERON:0010314,3.50e-07,132;UBERON:0000125,5.96e-07,9;UBERON:0002308,5.96e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,1.30139853857622,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.73886140225013,0,0,0,0,0,0,0,0,0,1.53481913652154,1.5686127061494,0.769350375349168,0.328014645699706,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70894156152249,0.238231775457789,0.822724546172388,1.29694662238543,1.62009431171434,3.96562588147135,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,1.0077309914171,0,0,0,0,0,0,0,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.868124974666461,0,0.120596438625408,1.52581736317083,1.76926815889959,2.95547618953547,0.658156191461918,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,1.1713222286267,0,0,0,0.394584402849391,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.873633341210151,0,0,0,0,0.969890164884194,0,0.451961481561065,0,0,0.189932387867636,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.303747783290123,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0.244052529803926,0.1251909307065,0.573409195690071,0.554645257684261,1.61450647647597,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68578179737669,1.94084660514027,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.192687675289379,0,0,0.41023272848151,0.756215088665154,0.484100767249525,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,6.42842203053944,10.0885116665647,0.606965604236632,0.227662191351298,0,0,0,4.55397210944772,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0.795803100645473,0,0,1.31928620094515,0.150962843566674,0.0771741581079447,0,0,0,0,0.588925401344836,0,1.2679671827502,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.407948941145488,0.872701380680755,0,0,0,0,0,0,0,0.305966489225945,0.26721740526556,0.735159196278759,0,0,0,0.829169439458779,0.310298987585686,1.49263787330687,0,0,0.0620747142958579,0.448527450322454,0,0,2.17716747896961,0.342233301085281,1.41439311330634,0.143444410785353,0,0,0,0,0,0,0,0.813792356631477,0,0,0|short_description=p3@KLHDC8A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55220 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25573 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-78bp_to_ENST00000539253_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_3_at_KLHDC8A_5end | |||
|id=chr1:205313388..205313421,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.46e-14;2!CL:0000764;3.52e-14;2!CL:0000558;3.52e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.21e-14,2;CL:0000765,2.21e-14,2;CL:0000050,2.21e-14,2;CL:0000038,2.21e-14,2;CL:0000558,2.21e-14,2;CL:0000547,2.21e-14,2;CL:0000549,2.21e-14,2;CL:0000550,2.21e-14,2;CL:0000552,2.21e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.28e-21;3!UBERON:0006222;6.18e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.51e-45!57;UBERON:0005068!3.51e-45!57;UBERON:0006241!3.51e-45!57;UBERON:0007135!3.51e-45!57;UBERON:0007023!3.33e-44!115;UBERON:0005743!1.49e-42!86;UBERON:0000073!3.63e-41!94;UBERON:0001016!3.63e-41!94;UBERON:0002616!1.80e-40!59;UBERON:0001017!1.92e-39!82;UBERON:0003075!1.41e-35!86;UBERON:0007284!1.41e-35!86;UBERON:0000955!5.50e-34!69;UBERON:0006238!5.50e-34!69;UBERON:0002346!2.29e-33!90;UBERON:0002780!1.95e-32!41;UBERON:0001890!1.95e-32!41;UBERON:0006240!1.95e-32!41;UBERON:0003080!1.85e-31!42;UBERON:0003056!4.46e-27!61;UBERON:0000153!1.51e-24!129;UBERON:0007811!1.51e-24!129;UBERON:0000033!6.22e-24!123;UBERON:0004121!2.25e-23!169;UBERON:0002020!1.15e-22!34;UBERON:0003528!1.15e-22!34;UBERON:0000924!1.88e-22!173;UBERON:0006601!1.88e-22!173;UBERON:0001893!4.18e-22!34;UBERON:0001869!6.80e-22!32;UBERON:0002791!8.74e-21!33;UBERON:0002619!6.10e-18!22;UBERON:0001950!8.26e-18!20;UBERON:0000956!2.35e-17!25;UBERON:0000203!2.35e-17!25;UBERON:0003076!1.34e-14!15;UBERON:0003057!1.34e-14!15;UBERON:0001894!2.77e-13!7;UBERON:0006222!2.77e-13!7;UBERON:0004733!1.07e-12!12;UBERON:0002028!1.07e-12!12;UBERON:0007277!1.07e-12!12;UBERON:0004732!1.51e-11!13;UBERON:0000025!4.27e-11!194;UBERON:0000200!3.40e-10!6;UBERON:0001871!4.56e-10!7;UBERON:0002298!8.66e-09!8;UBERON:0004111!1.03e-08!241;UBERON:0000064!1.19e-08!219;UBERON:0000477!1.84e-08!286;UBERON:0003296!1.89e-08!4;UBERON:0010133!1.89e-08!4;UBERON:0002680!3.74e-08!9;UBERON:0001895!3.74e-08!9;UBERON:0010092!3.74e-08!9;UBERON:0000922!1.12e-07!612;UBERON:0000988!4.11e-07!3;UBERON:0000468!6.32e-07!659;UBERON:0000483!9.18e-07!309;UBERON:0002308!9.30e-07!9;UBERON:0000125!9.30e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;1.48e-26;12!UBERON:0002028;1.48e-26;12!UBERON:0002680;2.01e-26;9!UBERON:0001895;2.01e-26;9!UBERON:0004732;1.87e-24;13!UBERON:0000988;7.08e-21;3!UBERON:0002298;3.95e-18;6!UBERON:0001905;2.79e-15;2!UBERON:0002757;2.79e-15;2!UBERON:0010134;2.79e-15;2!UBERON:0005408;2.79e-15;2!UBERON:0001899;2.79e-15;2!UBERON:0002148;3.52e-14;2!UBERON:0006331;3.52e-14;2!UBERON:0009662;3.52e-14;2!UBERON:0000178;4.14e-11;15!UBERON:0000179;4.14e-11;15!UBERON:0000463;4.14e-11;15!UBERON:0002037;1.17e-10;6!UBERON:0001894;1.68e-09;7!UBERON:0000073;4.24e-09;53!UBERON:0002616;4.24e-09;53!UBERON:0007023;8.13e-09;114!UBERON:0001016;4.22e-08;83!UBERON:0003296;4.55e-08;4!UBERON:0010133;4.55e-08;4!UBERON:0002784;4.55e-08;4!UBERON:0000955;5.77e-08;68!UBERON:0002372;6.18e-08;1!UBERON:0001961;6.18e-08;1!UBERON:0001744;6.18e-08;1!UBERON:0001042;6.18e-08;1!UBERON:0001735;6.18e-08;1!UBERON:0000125;3.89e-07;9!UBERON:0002308;3.89e-07;9!UBERON:0001017;5.60e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,2.36e-27,15;UBERON:0003057,2.36e-27,15;UBERON:0004733,1.38e-26,12;UBERON:0002028,1.38e-26,12;UBERON:0007277,1.38e-26,12;UBERON:0002680,2.32e-26,9;UBERON:0001895,2.32e-26,9;UBERON:0010092,2.32e-26,9;UBERON:0004732,1.75e-24,13;UBERON:0007023,2.54e-24,114;UBERON:0000988,1.96e-20,3;UBERON:0002298,6.18e-18,6;UBERON:0001016,1.02e-17,89;UBERON:0001049,2.29e-17,56;UBERON:0005068,2.29e-17,56;UBERON:0006241,2.29e-17,56;UBERON:0007135,2.29e-17,56;UBERON:0000073,1.11e-15,53;UBERON:0002616,1.11e-15,53;UBERON:0001905,2.80e-15,2;UBERON:0002757,2.80e-15,2;UBERON:0010134,2.80e-15,2;UBERON:0005408,2.80e-15,2;UBERON:0001899,2.80e-15,2;UBERON:0001017,3.45e-15,81;UBERON:0002148,9.59e-14,2;UBERON:0006331,9.59e-14,2;UBERON:0009662,9.59e-14,2;UBERON:0000955,1.38e-11,68;UBERON:0006238,1.38e-11,68;UBERON:0000178,3.34e-11,15;UBERON:0000179,3.34e-11,15;UBERON:0000463,3.34e-11,15;UBERON:0003075,3.75e-11,82;UBERON:0007284,3.75e-11,82;UBERON:0002037,7.90e-11,6;UBERON:0006215,7.90e-11,6;UBERON:0002346,1.58e-10,86;UBERON:0004121,3.57e-10,171;UBERON:0000924,3.57e-10,171;UBERON:0006601,3.57e-10,171;UBERON:0001894,2.06e-09,7;UBERON:0006222,2.06e-09,7;UBERON:0010371,2.63e-08,104;UBERON:0003296,4.56e-08,4;UBERON:0010133,4.56e-08,4;UBERON:0002784,4.56e-08,4;UBERON:0002372,6.19e-08,1;UBERON:0001961,6.19e-08,1;UBERON:0001744,6.19e-08,1;UBERON:0001735,6.19e-08,1;UBERON:0011216,6.94e-08,223;UBERON:0010314,3.50e-07,132;UBERON:0000125,5.96e-07,9;UBERON:0002308,5.96e-07,9 | |||
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|short_description=p3@KLHDC8A | |||
}} |
Revision as of 03:04, 12 September 2013
Short description: | p3@KLHDC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KLHDC8A_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -78bp_to_ENST00000539253_5end |
EntrezGene: | KLHDC8A |
HGNC: | 25573 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.21e-14 | 2 |
erythroblast | 2.21e-14 | 2 |
megakaryocyte-erythroid progenitor cell | 2.21e-14 | 2 |
erythroid progenitor cell | 2.21e-14 | 2 |
reticulocyte | 2.21e-14 | 2 |
proerythroblast | 2.21e-14 | 2 |
basophilic erythroblast | 2.21e-14 | 2 |
polychromatophilic erythroblast | 2.21e-14 | 2 |
orthochromatic erythroblast | 2.21e-14 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.