FFCP PHASE1:Hg19::chr1:205886505..205886551,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=115019|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=14469|TSSclassifier=W|UniProt=|association_with_transcript=-14bp_to_uc001hdm.2_5end|description=CAGE_peak_2_at_SLC26A9_5end|id=chr1:205886505..205886551,-|ontology_enrichment_celltype=CL:0000945!1.34e-09!24;CL:0000826!1.34e-09!24|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010227;1.15e-15;1!UBERON:0004140;1.15e-15;1!UBERON:0010226;2.56e-15;1!UBERON:0003104;3.01e-07;31|ontology_enrichment_disease=DOID:114!7.56e-10!2|ontology_enrichment_disease_v019=DOID:114;2.57e-08;2|ontology_enrichment_disease_v019_2=DOID:114,2.87e-08,2|ontology_enrichment_uberon=UBERON:0007023!2.56e-10!115;UBERON:0007100!2.23e-09!27;UBERON:0003103!3.12e-09!69;UBERON:0004151!5.17e-07!3;UBERON:0003978!5.80e-07!3;UBERON:0009751!5.80e-07!3;UBERON:0000946!5.80e-07!3;UBERON:0002523!5.80e-07!3;UBERON:0005983!5.80e-07!3;UBERON:0002165!5.80e-07!3;UBERON:0002062!5.80e-07!3;UBERON:0007280!5.80e-07!3;UBERON:0008814!8.17e-07!15;UBERON:0000988!8.94e-07!3|ontology_enrichment_uberon_v019=UBERON:0007100;3.79e-20;25!UBERON:0004151;8.26e-20;3!UBERON:0002146;5.56e-16;1!UBERON:0005623;5.56e-16;1!UBERON:0002079;1.15e-15;1!UBERON:0002084;2.56e-15;1!UBERON:0002426;2.56e-15;1!UBERON:0003831;2.56e-15;1!UBERON:0003898;2.56e-15;1!UBERON:0004830;2.56e-15;1!UBERON:0002082;2.56e-15;1!UBERON:0003830;2.56e-15;1!UBERON:0005175;2.56e-15;1!UBERON:0001774;2.56e-15;1!UBERON:0001103;2.56e-15;1!UBERON:0000948;1.07e-10;22!UBERON:0002081;1.73e-08;2!UBERON:0005090;2.57e-08;2!UBERON:0001630;2.57e-08;2!UBERON:0003103;3.97e-07;61|ontology_enrichment_uberon_v019_2=UBERON:0004151,7.16e-20,3;UBERON:0007100,1.23e-18,27;UBERON:0002146,5.56e-16,1;UBERON:0005623,5.56e-16,1;UBERON:0002079,1.34e-15,1;UBERON:0002084,1.78e-15,1;UBERON:0002082,1.78e-15,1;UBERON:0010226,1.78e-15,1;UBERON:0002426,2.75e-15,1;UBERON:0003831,2.75e-15,1;UBERON:0003898,2.75e-15,1;UBERON:0004830,2.75e-15,1;UBERON:0003830,2.75e-15,1;UBERON:0005175,2.75e-15,1;UBERON:0001774,2.75e-15,1;UBERON:0001103,2.75e-15,1;UBERON:0010084,2.75e-15,1;UBERON:0003103,1.39e-12,68;UBERON:0000948,8.02e-10,24;UBERON:0005498,8.02e-10,24;UBERON:0004140,8.02e-10,24;UBERON:0009881,8.02e-10,24;UBERON:0004141,8.02e-10,24;UBERON:0003084,8.02e-10,24;UBERON:0007005,8.02e-10,24;UBERON:0004139,8.02e-10,24;UBERON:0004291,8.02e-10,24;UBERON:0002081,1.86e-08,2;UBERON:0010227,1.86e-08,2;UBERON:0005090,2.67e-08,2;UBERON:0001630,2.67e-08,2;UBERON:0007023,2.86e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68507104770311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0,1.60515529459758,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84167259326905,0,0,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,6.64565229633883,0,0.599037001496973,1.28767814440971,1.78537165953498,2.01550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73372556058236,1.25891011523995,0,0,0,2.1440859791201,1.98627591109629,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0,0,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68908406739856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.747667062745149,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97722139883116,0,0,0,0,0,0,0.109940516745429,2.71733118420012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407955318967927,0,0,0,0,0,0,0,0.426467963801962,0,0.322944549180031,0.124149428591716,0,0.381882949668989,0.404234377916439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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=115019 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=14469 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_uc001hdm.2_5end | |||
|description=CAGE_peak_2_at_SLC26A9_5end | |||
|id=chr1:205886505..205886551,- | |||
|ontology_enrichment_celltype=CL:0000945!1.34e-09!24;CL:0000826!1.34e-09!24 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.15e-15;1!UBERON:0004140;1.15e-15;1!UBERON:0010226;2.56e-15;1!UBERON:0003104;3.01e-07;31 | |||
|ontology_enrichment_disease=DOID:114!7.56e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.57e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.87e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.56e-10!115;UBERON:0007100!2.23e-09!27;UBERON:0003103!3.12e-09!69;UBERON:0004151!5.17e-07!3;UBERON:0003978!5.80e-07!3;UBERON:0009751!5.80e-07!3;UBERON:0000946!5.80e-07!3;UBERON:0002523!5.80e-07!3;UBERON:0005983!5.80e-07!3;UBERON:0002165!5.80e-07!3;UBERON:0002062!5.80e-07!3;UBERON:0007280!5.80e-07!3;UBERON:0008814!8.17e-07!15;UBERON:0000988!8.94e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.79e-20;25!UBERON:0004151;8.26e-20;3!UBERON:0002146;5.56e-16;1!UBERON:0005623;5.56e-16;1!UBERON:0002079;1.15e-15;1!UBERON:0002084;2.56e-15;1!UBERON:0002426;2.56e-15;1!UBERON:0003831;2.56e-15;1!UBERON:0003898;2.56e-15;1!UBERON:0004830;2.56e-15;1!UBERON:0002082;2.56e-15;1!UBERON:0003830;2.56e-15;1!UBERON:0005175;2.56e-15;1!UBERON:0001774;2.56e-15;1!UBERON:0001103;2.56e-15;1!UBERON:0000948;1.07e-10;22!UBERON:0002081;1.73e-08;2!UBERON:0005090;2.57e-08;2!UBERON:0001630;2.57e-08;2!UBERON:0003103;3.97e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,7.16e-20,3;UBERON:0007100,1.23e-18,27;UBERON:0002146,5.56e-16,1;UBERON:0005623,5.56e-16,1;UBERON:0002079,1.34e-15,1;UBERON:0002084,1.78e-15,1;UBERON:0002082,1.78e-15,1;UBERON:0010226,1.78e-15,1;UBERON:0002426,2.75e-15,1;UBERON:0003831,2.75e-15,1;UBERON:0003898,2.75e-15,1;UBERON:0004830,2.75e-15,1;UBERON:0003830,2.75e-15,1;UBERON:0005175,2.75e-15,1;UBERON:0001774,2.75e-15,1;UBERON:0001103,2.75e-15,1;UBERON:0010084,2.75e-15,1;UBERON:0003103,1.39e-12,68;UBERON:0000948,8.02e-10,24;UBERON:0005498,8.02e-10,24;UBERON:0004140,8.02e-10,24;UBERON:0009881,8.02e-10,24;UBERON:0004141,8.02e-10,24;UBERON:0003084,8.02e-10,24;UBERON:0007005,8.02e-10,24;UBERON:0004139,8.02e-10,24;UBERON:0004291,8.02e-10,24;UBERON:0002081,1.86e-08,2;UBERON:0010227,1.86e-08,2;UBERON:0005090,2.67e-08,2;UBERON:0001630,2.67e-08,2;UBERON:0007023,2.86e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68507104770311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0,1.60515529459758,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84167259326905,0,0,0,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,6.64565229633883,0,0.599037001496973,1.28767814440971,1.78537165953498,2.01550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73372556058236,1.25891011523995,0,0,0,2.1440859791201,1.98627591109629,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0,0,0,0,0,0,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68908406739856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0.747667062745149,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97722139883116,0,0,0,0,0,0,0.109940516745429,2.71733118420012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407955318967927,0,0,0,0,0,0,0,0.426467963801962,0,0.322944549180031,0.124149428591716,0,0.381882949668989,0.404234377916439,0.435433495793923,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p2@SLC26A9 | |||
}} |
Revision as of 03:06, 12 September 2013
Short description: | p2@SLC26A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SLC26A9_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_uc001hdm.2_5end |
EntrezGene: | SLC26A9 |
HGNC: | 14469 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 7.16e-20 | 3 |
primary circulatory organ | 1.23e-18 | 27 |
pulmonary valve | 5.56e-16 | 1 |
semi-lunar valve | 5.56e-16 | 1 |
left cardiac atrium | 1.34e-15 | 1 |
heart left ventricle | 1.78e-15 | 1 |
cardiac ventricle | 1.78e-15 | 1 |
future cardiac ventricle | 1.78e-15 | 1 |
chest muscle | 2.75e-15 | 1 |
respiratory system muscle | 2.75e-15 | 1 |
skeletal muscle of trunk | 2.75e-15 | 1 |
respiratory system skeletal muscle | 2.75e-15 | 1 |
thoracic segment muscle | 2.75e-15 | 1 |
chest organ | 2.75e-15 | 1 |
muscle of trunk | 2.75e-15 | 1 |
diaphragm | 2.75e-15 | 1 |
future diaphragm | 2.75e-15 | 1 |
compound organ | 1.39e-12 | 68 |
heart | 8.02e-10 | 24 |
primitive heart tube | 8.02e-10 | 24 |
primary heart field | 8.02e-10 | 24 |
anterior lateral plate mesoderm | 8.02e-10 | 24 |
heart tube | 8.02e-10 | 24 |
heart primordium | 8.02e-10 | 24 |
cardiac mesoderm | 8.02e-10 | 24 |
cardiogenic plate | 8.02e-10 | 24 |
heart rudiment | 8.02e-10 | 24 |
cardiac atrium | 1.86e-08 | 2 |
future cardiac atrium | 1.86e-08 | 2 |
muscle structure | 2.67e-08 | 2 |
muscle organ | 2.67e-08 | 2 |
adult organism | 2.86e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.87e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.