FFCP PHASE1:Hg19::chr2:216248100..216248102,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2335|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3778|TSSclassifier=N|UniProt=|association_with_transcript=103bp_to_ENST00000490833_5end|coexpression_cluster_id=C79|description=CAGE_peak_80_at_FN1_5end|id=chr2:216248100..216248102,-|ontology_enrichment_celltype=CL:0000057!3.16e-14!75;CL:0000055!2.98e-11!180;CL:0002334!1.01e-08!12;CL:0002537!3.88e-07!5;CL:0000144!4.50e-07!625;CL:0002371!8.41e-07!591|ontology_enrichment_celltype_v019=CL:0002541;1.21e-12;3!CL:0002580;5.26e-12;3!CL:0000511;1.25e-09;1!CL:0002625;1.25e-09;1!CL:0000216;1.25e-09;1!CL:0000134;4.57e-08;55!CL:0002334;9.51e-07;12|ontology_enrichment_celltype_v019_2=CL:0002541,1.21e-12,3;CL:0002580,3.37e-12,3;CL:0000511,7.50e-10,1;CL:0002625,7.50e-10,1;CL:0000216,7.50e-10,1;CL:0002334,8.44e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2513;5.07e-10;1!DOID:3369;1.25e-09;1|ontology_enrichment_disease_v019_2=DOID:2513,5.31e-10,1;DOID:3369,1.06e-09,1|ontology_enrichment_uberon=UBERON:0005631!2.61e-10!14;UBERON:0000158!2.61e-10!14;UBERON:0000478!2.10e-08!24;UBERON:0004871!2.39e-08!8;UBERON:0000305!5.85e-07!7|ontology_enrichment_uberon_v019=UBERON:0003124;1.21e-12;3!UBERON:0000920;1.21e-12;3!UBERON:0001136;1.25e-09;1!UBERON:0001343;1.25e-09;1!UBERON:0004910;1.25e-09;1!UBERON:0004813;1.25e-09;1!UBERON:0005631;2.77e-08;10!UBERON:0000158;2.77e-08;10!UBERON:0000310;5.24e-08;10!UBERON:0001443;2.54e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.21e-12,3;UBERON:0001136,7.50e-10,1;UBERON:0001343,7.50e-10,1;UBERON:0004910,7.50e-10,1;UBERON:0005154,7.50e-10,1;UBERON:0005295,7.50e-10,1;UBERON:0004813,7.50e-10,1;UBERON:0005297,7.50e-10,1;UBERON:0005294,7.50e-10,1;UBERON:0010141,7.50e-10,1;UBERON:0005891,7.50e-10,1;UBERON:0000310,4.65e-08,10;UBERON:0001443,2.28e-07,11|phase1_expression=0.726713517082227,1.2846031433459,0.704772020479856,0,0,0,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0.361439152384566,0,0.434539556882471,1.5905718941022,5.35298357332899,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,1.49091585508596,0,0.926864265692532,0.286836620748814,0.354668382198357,0.560677600142307,0,0,1.24484414159907,0.134710672069688,0,0,0,0,0.312160076830321,0,0.747243402759005,0,0,0.140450806702248,0,0.491337269247072,0.103325781175765,0,0.741800787835671,0,0,0.168336113954066,0,0,0,0.612975591598039,0.300476117813194,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0.558350568994769,0.168776332241266,0.0974370051611986,0.504867548488229,0.276149695926898,0.323292113637624,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,1.690605505112,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,0,0.718874566474748,0,0,0.289562613335158,0.821905290201534,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,2.49800584316026,0.315404830067869,0.585707074963566,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,1.38115775959256,1.68396056659844,0.512556597022804,0.511707249066704,1.28683136914886,0,0.462629081407967,0.355123450626254,0.0821271560138091,0,0,0.120859449591622,0.601519410909855,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0.137836572484531,0.322260734604821,0.435050081742686,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.510450849978337,0.10115778085555,0,1.25924938732256,0,0,0,0,0.37064843820784,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0,0,0.7133421029625,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.614321404198464,0,0,0.779160935160341,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,3.82801391678303,0.183195186803725,6.92945208824225,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=103bp_to_ENST00000490833_5end | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_80_at_FN1_5end | |||
|id=chr2:216248100..216248102,- | |||
|ontology_enrichment_celltype=CL:0000057!3.16e-14!75;CL:0000055!2.98e-11!180;CL:0002334!1.01e-08!12;CL:0002537!3.88e-07!5;CL:0000144!4.50e-07!625;CL:0002371!8.41e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.21e-12;3!CL:0002580;5.26e-12;3!CL:0000511;1.25e-09;1!CL:0002625;1.25e-09;1!CL:0000216;1.25e-09;1!CL:0000134;4.57e-08;55!CL:0002334;9.51e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.21e-12,3;CL:0002580,3.37e-12,3;CL:0000511,7.50e-10,1;CL:0002625,7.50e-10,1;CL:0000216,7.50e-10,1;CL:0002334,8.44e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;5.07e-10;1!DOID:3369;1.25e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,5.31e-10,1;DOID:3369,1.06e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.61e-10!14;UBERON:0000158!2.61e-10!14;UBERON:0000478!2.10e-08!24;UBERON:0004871!2.39e-08!8;UBERON:0000305!5.85e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.21e-12;3!UBERON:0000920;1.21e-12;3!UBERON:0001136;1.25e-09;1!UBERON:0001343;1.25e-09;1!UBERON:0004910;1.25e-09;1!UBERON:0004813;1.25e-09;1!UBERON:0005631;2.77e-08;10!UBERON:0000158;2.77e-08;10!UBERON:0000310;5.24e-08;10!UBERON:0001443;2.54e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.21e-12,3;UBERON:0001136,7.50e-10,1;UBERON:0001343,7.50e-10,1;UBERON:0004910,7.50e-10,1;UBERON:0005154,7.50e-10,1;UBERON:0005295,7.50e-10,1;UBERON:0004813,7.50e-10,1;UBERON:0005297,7.50e-10,1;UBERON:0005294,7.50e-10,1;UBERON:0010141,7.50e-10,1;UBERON:0005891,7.50e-10,1;UBERON:0000310,4.65e-08,10;UBERON:0001443,2.28e-07,11 | |||
|phase1_expression=0.726713517082227,1.2846031433459,0.704772020479856,0,0,0,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0.361439152384566,0,0.434539556882471,1.5905718941022,5.35298357332899,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,1.49091585508596,0,0.926864265692532,0.286836620748814,0.354668382198357,0.560677600142307,0,0,1.24484414159907,0.134710672069688,0,0,0,0,0.312160076830321,0,0.747243402759005,0,0,0.140450806702248,0,0.491337269247072,0.103325781175765,0,0.741800787835671,0,0,0.168336113954066,0,0,0,0.612975591598039,0.300476117813194,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0.558350568994769,0.168776332241266,0.0974370051611986,0.504867548488229,0.276149695926898,0.323292113637624,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,1.690605505112,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0,0,0.099972991182057,0,0,0,0.718874566474748,0,0,0.289562613335158,0.821905290201534,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24782516918484,2.49800584316026,0.315404830067869,0.585707074963566,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0.496215615637554,1.38115775959256,1.68396056659844,0.512556597022804,0.511707249066704,1.28683136914886,0,0.462629081407967,0.355123450626254,0.0821271560138091,0,0,0.120859449591622,0.601519410909855,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.193341436584244,0,0,0.137836572484531,0.322260734604821,0.435050081742686,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.510450849978337,0.10115778085555,0,1.25924938732256,0,0,0,0,0.37064843820784,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0,0,0.7133421029625,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.614321404198464,0,0,0.779160935160341,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,3.82801391678303,0.183195186803725,6.92945208824225,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0.157566364614447,0.164831716762333,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30634944043764,0,0,0.511164065356265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378806010550178,0.50313580350515,1.77962244319307,0,0.604923695052956,0,0,0,0.449803112163605,0.155262956876259,0.829412415681711,0,1.04349012362347,0,0,0,0,0.322231671127465,0.928067519756987,1.59238355479446,1.20008329398946,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0.171488009437418,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0.846774100381858,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p80@FN1 | |||
}} |
Revision as of 16:34, 12 September 2013
Short description: | p80@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_80_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 103bp_to_ENST00000490833_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.21e-12 | 3 |
preadipocyte of the breast | 3.37e-12 | 3 |
androgen binding protein secreting cell | 7.50e-10 | 1 |
seminiferous tubule epithelial cell | 7.50e-10 | 1 |
Sertoli cell | 7.50e-10 | 1 |
preadipocyte | 8.44e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.21e-12 | 3 |
mesothelium | 7.50e-10 | 1 |
seminiferous tubule of testis | 7.50e-10 | 1 |
epithelium of male gonad | 7.50e-10 | 1 |
epithelial cord | 7.50e-10 | 1 |
sex cord | 7.50e-10 | 1 |
seminiferous tubule epithelium | 7.50e-10 | 1 |
testis sex cord | 7.50e-10 | 1 |
genital ridge | 7.50e-10 | 1 |
primitive sex cord of indifferent gonad | 7.50e-10 | 1 |
coelomic epithelium | 7.50e-10 | 1 |
breast | 4.65e-08 | 10 |
chest | 2.28e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 5.31e-10 | 1 |
peripheral primitive neuroectodermal tumor | 1.06e-09 | 1 |
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