FFCP PHASE1:Mm9::chr10:67442340..67442357,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=170799|HGNC=|MCL_coexpression_id=32|UniProt=Q14B46,E9QP76|association_with_transcript=0bp_to_ENSMUST00000068994,ENSMUST00000105437,NM_001081346,uc007fmd.1,uc007fme.1,uc011xfq.1_5end|description=CAGE_peak_1_at_Rtkn2_5end|id=chr10:67442340..67442357,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!4.93e-09!14;UBERON:0000117!4.93e-09!14;UBERON:0000171!4.93e-09!14;UBERON:0000170!4.93e-09!14;UBERON:0005597!4.93e-09!14;UBERON:0000118!4.93e-09!14;UBERON:0005153!7.03e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,7.35e-11,14;UBERON:0000117,7.35e-11,14;UBERON:0000171,7.35e-11,14;UBERON:0000170,7.35e-11,14;UBERON:0005597,7.35e-11,14;UBERON:0000118,7.35e-11,14;UBERON:0005153,4.86e-08,17;UBERON:0005178,4.86e-08,17;UBERON:0005181,4.86e-08,17;UBERON:0002224,4.86e-08,17;UBERON:0000915,4.86e-08,17;UBERON:0008947,4.86e-08,17;UBERON:0003258,4.86e-08,17;UBERON:0005157,5.27e-08,20|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0.468129052643987,0,0,0,0.174840804837995,0,0,0,0,0,0,32.8267099983129,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,1.1554064790051,0.166234645358492,0.204169356262369,7.53356935326434,3.906676722619,9.42342739152837,6.47054636834116,7.5135003345429,9.22469670759192,0.755380907853464,0.304130793658544,2.20256102594018,0,1.09012578190223,0,0,0.699932108126813,1.43752564364972,0.167782606057736,0.725362142011344,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.405017814995072,0.210324961351382,0.856952953211411,2.42955395046775,0.367472397644862,1.53352753629178,0.919218786610021,5.50579404996943,3.31987079021488,3.84016333140609,1.18697658957174,0.182975287204819,0,7.53794097303729,1.68828783009504,7.48711414106369,0.589257170947335,0.427115042397309,0,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,1.54488862144927,3.2381761289831,2.59786004602869,3.18005617059306,0.14084341977668,1.28326477414318,2.54805239706646,0,0,0,0,4.45317130904334,0.258937883647172,0.148442139064825,1.04091196059682,0,0.461230994512117,0.301445281105245,0.23517741427141,0,4.94389935468748,0.144599356919912,0.884610551949874,0.647067399789637,0.441683036920787,0,0,2.04946557908083,1.25668024088073,0,0.239630249011841,0,0.254140454146129,3.2953940669061,3.20250421973039,0.125654352112864,0.869121600961382,1.27857728665165,2.28566849015516,3.0825839982874,0.81471491080253,0.746441823660558,0,0,1.69156575851515,1.83921683546778,3.42118046630164,2.71268672104287,2.85753296435577,3.84341160854549,3.5606655332697,1.03481348295606,0.431135985865684,0.756424320671277,0.879755620819744,1.53437012699302,0.556094498451196,1.74126083261083,0.411564272815887,0.796137067273973,1.40442637462647,0.772043721344145,0.568326998791185,0,0.469052119962192,0.720248245844059,0.710234206755631,0.393528463494808,0.462801338662135,0.232533944750408,3.48755421819505,0.934122738937356,0.658239399653922,0,0.243206428637567,0,0,0,1.89260953707715,0.411618449517138,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.201683524623343,0.889512175379481,0.570676878337677,0,0.164698954724011,0,0.596869416123452,0.38992817423824,0.898819408654221,0,0,0.948339504765408,0.799739588268102,0,0.814605311381257,0.193952487167626,0.49095073923223,0.379419222745544,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0,0.224862112384854,0.405720242777006,0.482354319504834,1.2731292589071,6.32931502391783,0.486405680325106,0,0,4.09355042435354,0.624075346229121,0.252578877947112,0,0,176.993556179607,1.32643988239339,0.977789858652155,4.58311731593008,4.45911471748154,29.983620082085,141.635966327178,189.66990571778,138.718926813448,134.207601927158,131.869093679742,155.34242235052,126.578091707701,181.245270402634,0,0,0.491764273019036,0.275936746304732,3.53211297973142,5.15731421005694,2.78689407140348,0,0.315508219416257,2.34263246577983,1.93881057959519,1.91175038362042,0.891194696329576,1.41538265394416,2.83367491172426,1.75353514746787,0.395287777946524,1.28528526568723,0.141940085208269,0.534196811001766,0.81443479676788,0.164970122972535,0,0.485561272309963,0,0.377210159511796,0.590603785761546,0.922305443831782,0,0.727067458955011,0.356497378384721,0,0,0,0.340439605753788,1.08036656418786,0.905510786479282,0.857348140126369,0.177340233642274,0,0.164549020602121,0,2.11204537257339,0,0,5.60613260001032,1.45317984026315,5.72972786817481,9.78853220825719,12.8029901801148,0,5.93360966433631,0,0.412773735926445,1.11116716421827,0.941842285023455,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0,0.949007980743406,0.406638934253697,0.648032044930808,0.209088296014469,0.655087691238533,0.809186078308924,0.165306911450672,0,0,0,0,0.897099276263873,0.992750942742586,0.583353565032143,0.387479470433193,0.506868376472335,0.117357238645754,1.5624526181274,2.20204623293993,0.7247523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| ||
|EntrezGene=170799 | |||
|HGNC= | |||
|MCL_coexpression_id=32 | |||
|UniProt=Q14B46,E9QP76 | |||
|association_with_transcript=0bp_to_ENSMUST00000068994,ENSMUST00000105437,NM_001081346,uc007fmd.1,uc007fme.1,uc011xfq.1_5end | |||
|description=CAGE_peak_1_at_Rtkn2_5end | |||
|id=chr10:67442340..67442357,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!4.93e-09!14;UBERON:0000117!4.93e-09!14;UBERON:0000171!4.93e-09!14;UBERON:0000170!4.93e-09!14;UBERON:0005597!4.93e-09!14;UBERON:0000118!4.93e-09!14;UBERON:0005153!7.03e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,7.35e-11,14;UBERON:0000117,7.35e-11,14;UBERON:0000171,7.35e-11,14;UBERON:0000170,7.35e-11,14;UBERON:0005597,7.35e-11,14;UBERON:0000118,7.35e-11,14;UBERON:0005153,4.86e-08,17;UBERON:0005178,4.86e-08,17;UBERON:0005181,4.86e-08,17;UBERON:0002224,4.86e-08,17;UBERON:0000915,4.86e-08,17;UBERON:0008947,4.86e-08,17;UBERON:0003258,4.86e-08,17;UBERON:0005157,5.27e-08,20 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.258246646883153,0.281577444303333,0.468129052643987,0,0,0,0.174840804837995,0,0,0,0,0,0,32.8267099983129,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,1.1554064790051,0.166234645358492,0.204169356262369,7.53356935326434,3.906676722619,9.42342739152837,6.47054636834116,7.5135003345429,9.22469670759192,0.755380907853464,0.304130793658544,2.20256102594018,0,1.09012578190223,0,0,0.699932108126813,1.43752564364972,0.167782606057736,0.725362142011344,0,0,0,0,0.809265843438391,0,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,0.207379224616955,0.405017814995072,0.210324961351382,0.856952953211411,2.42955395046775,0.367472397644862,1.53352753629178,0.919218786610021,5.50579404996943,3.31987079021488,3.84016333140609,1.18697658957174,0.182975287204819,0,7.53794097303729,1.68828783009504,7.48711414106369,0.589257170947335,0.427115042397309,0,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,1.54488862144927,3.2381761289831,2.59786004602869,3.18005617059306,0.14084341977668,1.28326477414318,2.54805239706646,0,0,0,0,4.45317130904334,0.258937883647172,0.148442139064825,1.04091196059682,0,0.461230994512117,0.301445281105245,0.23517741427141,0,4.94389935468748,0.144599356919912,0.884610551949874,0.647067399789637,0.441683036920787,0,0,2.04946557908083,1.25668024088073,0,0.239630249011841,0,0.254140454146129,3.2953940669061,3.20250421973039,0.125654352112864,0.869121600961382,1.27857728665165,2.28566849015516,3.0825839982874,0.81471491080253,0.746441823660558,0,0,1.69156575851515,1.83921683546778,3.42118046630164,2.71268672104287,2.85753296435577,3.84341160854549,3.5606655332697,1.03481348295606,0.431135985865684,0.756424320671277,0.879755620819744,1.53437012699302,0.556094498451196,1.74126083261083,0.411564272815887,0.796137067273973,1.40442637462647,0.772043721344145,0.568326998791185,0,0.469052119962192,0.720248245844059,0.710234206755631,0.393528463494808,0.462801338662135,0.232533944750408,3.48755421819505,0.934122738937356,0.658239399653922,0,0.243206428637567,0,0,0,1.89260953707715,0.411618449517138,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0.201683524623343,0.889512175379481,0.570676878337677,0,0.164698954724011,0,0.596869416123452,0.38992817423824,0.898819408654221,0,0,0.948339504765408,0.799739588268102,0,0.814605311381257,0.193952487167626,0.49095073923223,0.379419222745544,0,0.156998727841375,0.123397163921801,0,0.333690211432188,0,0.224862112384854,0.405720242777006,0.482354319504834,1.2731292589071,6.32931502391783,0.486405680325106,0,0,4.09355042435354,0.624075346229121,0.252578877947112,0,0,176.993556179607,1.32643988239339,0.977789858652155,4.58311731593008,4.45911471748154,29.983620082085,141.635966327178,189.66990571778,138.718926813448,134.207601927158,131.869093679742,155.34242235052,126.578091707701,181.245270402634,0,0,0.491764273019036,0.275936746304732,3.53211297973142,5.15731421005694,2.78689407140348,0,0.315508219416257,2.34263246577983,1.93881057959519,1.91175038362042,0.891194696329576,1.41538265394416,2.83367491172426,1.75353514746787,0.395287777946524,1.28528526568723,0.141940085208269,0.534196811001766,0.81443479676788,0.164970122972535,0,0.485561272309963,0,0.377210159511796,0.590603785761546,0.922305443831782,0,0.727067458955011,0.356497378384721,0,0,0,0.340439605753788,1.08036656418786,0.905510786479282,0.857348140126369,0.177340233642274,0,0.164549020602121,0,2.11204537257339,0,0,5.60613260001032,1.45317984026315,5.72972786817481,9.78853220825719,12.8029901801148,0,5.93360966433631,0,0.412773735926445,1.11116716421827,0.941842285023455,0.136694227721025,0,0,0.139951452323658,0.138199973804424,0,0.949007980743406,0.406638934253697,0.648032044930808,0.209088296014469,0.655087691238533,0.809186078308924,0.165306911450672,0,0,0,0,0.897099276263873,0.992750942742586,0.583353565032143,0.387479470433193,0.506868376472335,0.117357238645754,1.5624526181274,2.20204623293993,0.724752362478018,0,1.58005560314089,1.01362607645082,0.821687657318618,0.389762468933385,1.79026695667481,0.79472541912506,0.841368146639782,0.886137163047463,1.31256384932592,0.914481679859998,1.00826185136841,0.682205165178267,0.962118416403295,0.467507608726276,0,0,0.0897138566094757,0,0,0.375364950902364,0,0.214368379079066,0,0,0.920650473014354,0,1.3748254587495,0.685082519770642,0,0,0.900642406448441,0.453142408984205,0,1.3492355185943,0.798049746802062,1.02440163452481,0.729320151204882,0.419226325255965,1.83843508450014,5.11167473943715,4.32673620201678,2.88827288632634,4.80124702351215,4.05566879824384,6.22466926574051,6.27398100048212,3.84150914429216,3.79074095107048,3.81034953026459,3.70829843023538,5.01563973205633,4.94503080963968,3.82717192349433,4.80016953339582,4.61437096014278,5.48403236878838,6.1045494985578,6.39943786824248,4.39995961036718,4.57319932181931,5.78753365163254,4.75314398460516,2.80571135828869,3.2031454893527,5.22073756590486,3.6830793885272,5.26785260032284,1.73615949883027,0.499621155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| |||
|short_description=p1@Rtkn2 | |||
}} |
Revision as of 17:12, 12 September 2013
Short description: | p1@Rtkn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rtkn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | 0bp_to_ENSMUST00000068994, ENSMUST00000105437, NM_001081346, uc007fmd.1, uc007fme.1, uc011xfq.1_5end |
EntrezGene: | Rtkn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 7.35e-11 | 14 |
respiratory tube | 7.35e-11 | 14 |
respiration organ | 7.35e-11 | 14 |
pair of lungs | 7.35e-11 | 14 |
lung primordium | 7.35e-11 | 14 |
lung bud | 7.35e-11 | 14 |
epithelial bud | 4.86e-08 | 17 |
thoracic cavity element | 4.86e-08 | 17 |
thoracic segment organ | 4.86e-08 | 17 |
thoracic cavity | 4.86e-08 | 17 |
thoracic segment of trunk | 4.86e-08 | 17 |
respiratory primordium | 4.86e-08 | 17 |
endoderm of foregut | 4.86e-08 | 17 |
epithelial fold | 5.27e-08 | 20 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.