FFCP PHASE1:Mm9::chr10:75905394..75905417,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18541|HGNC=|MCL_coexpression_id=32|UniProt=Q3TQR8|association_with_transcript=113bp_to_ENSMUST00000171940_5end|description=CAGE_peak_2_at_Pcnt_5end|id=chr10:75905394..75905417,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005911!6.88e-15!69;UBERON:0004921!2.39e-14!126;UBERON:0004185!2.39e-14!126;UBERON:0004119!2.58e-14!130;UBERON:0000925!2.58e-14!130;UBERON:0006595!2.58e-14!130;UBERON:0001007!2.78e-14!128;UBERON:0001555!2.78e-14!128;UBERON:0007026!2.78e-14!128;UBERON:0001041!3.78e-13!92;UBERON:0000077!5.73e-12!97;UBERON:0000065!7.64e-11!41;UBERON:0001004!1.71e-10!42;UBERON:0003929!6.31e-09!55;UBERON:0005057!2.25e-08!51;UBERON:0002048!1.36e-07!14;UBERON:0000117!1.36e-07!14;UBERON:0000171!1.36e-07!14;UBERON:0000170!1.36e-07!14;UBERON:0005597!1.36e-07!14;UBERON:0000118!1.36e-07!14;UBERON:0004177!8.30e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001041,1.72e-16,80;UBERON:0004921,2.93e-16,114;UBERON:0004119,5.42e-16,118;UBERON:0000925,5.42e-16,118;UBERON:0006595,5.42e-16,118;UBERON:0001007,5.51e-16,116;UBERON:0001555,5.51e-16,116;UBERON:0007026,5.51e-16,116;UBERON:0005911,6.61e-16,69;UBERON:0000065,9.75e-12,41;UBERON:0001004,2.33e-11,42;UBERON:0003929,1.25e-09,55;UBERON:0002048,8.05e-08,14;UBERON:0000117,8.05e-08,14;UBERON:0000171,8.05e-08,14;UBERON:0000170,8.05e-08,14;UBERON:0005597,8.05e-08,14;UBERON:0000118,8.05e-08,14;UBERON:0004177,1.83e-07,29;UBERON:0005057,1.83e-07,29|phase1_expression=0.480446541314382,2.09385244583617,3.63999391511629,4.83942738090928,4.00716583957078,2.51818907867835,2.10251376535973,7.618276083053,3.801295498095,6.78787126333781,0.68487187290202,0.398860794976682,6.50562773738582,6.8187913886818,2.99798785634096,4.45445588257617,2.79824751251259,2.05050407482854,1.7824876368746,0.84877930359606,4.33720779770456,1.09220046320974,0.783599367416806,2.71987118748791,0.91763712426868,1.14846392823004,2.15380998079537,3.23206849028834,2.28028103347649,3.2763916868791,1.10865255327652,4.44521471421742,4.92051830067656,0,3.17736781726402,2.65975432573588,3.26670970019791,5.4409111995798,3.1253413780952,2.09409497589519,4.70585190424811,2.04913645487534,2.91306211818692,0.755380907853464,0.608261587317087,0.183546752161682,0.782391344348039,0.65407546914134,0.439372365468944,1.36100929351998,0.279972843250725,0,3.18786951509699,13.7818806982155,8.4023449785616,0.257259436035947,0.573066879877513,0,0.809265843438391,0.528990979272033,0.633831403506179,0.338844532069132,1.77858959222228,0.449949858640699,0,0,0,1.92109152660777,0.829516898467821,1.21505344498522,0.210324961351382,0.285650984403804,0.220868540951614,1.22490799214954,1.0543001812006,0.919218786610021,0,0.893811366596314,0.307213066512487,0.791317726381163,0.182975287204819,0,0.558365998002762,0,0.30559649555362,1.17851434189467,0.996601765593721,0.186399445825301,0.075726193333184,0.68014404096107,4.63783181922684,0,1.3599426674155,2.15881276655127,0.649776417447669,5.82434953226536,1.68533304158102,1.36344258062446,1.29893002301434,0,0.704217098883403,0,2.54805239706646,0,1.29894624606728,2.28023878927589,0.505524445014783,2.16949371466214,2.58937883647172,0.29688427812965,1.04091196059682,0.608930956624282,0.691846491768175,1.05505848386836,1.41106448562846,0.502666365318702,3.95511948374998,0.144599356919912,2.65383165584962,1.94120219936891,3.3126227769059,2.42437626567611,1.86391761218122,1.17112318804619,1.8850203613211,1.27728527604296,4.07371423320129,5.39912457894067,3.81210681219194,0.898743836428936,0.915001205637253,0.502617408451458,1.39059456153821,0.511430914660661,0.20778804455956,0.324482526135515,1.2220723662038,1.7416975885413,0,1.26265113531884,0.910843100738926,0.919608417733892,1.44049703844279,1.65775299619287,2.65342346690179,2.3060469651273,1.96773621575431,0,0.862271971731369,0.567318240503458,0.879755620819744,1.31517439456545,0.834141747676794,0.696504333044333,2.05782136407943,1.19420560091096,5.61770549850588,6.69104558498259,5.96743348730745,0.414251545071004,0.703578179943289,0.720248245844059,0.710234206755631,1.57411385397923,1.3884040159864,1.39520366850245,1.60964040839772,2.33530684734339,1.81015834904829,0.985004784474571,3.08061476274252,2.04679982395465,1.09775057645525,3.89198614405078,0.210289948564127,0.92614151141356,1.65209391491899,1.58670339998127,1.06644125267617,0.696710015581316,2.83508414908605,1.4117846723634,1.33426826306922,1.52180500890047,3.32170343081158,0.988193728344065,1.50801125280162,1.98956472041151,1.75467678407208,0.898819408654221,4.32276099749388,3.98282546508734,0.379335801906163,1.71372768914593,1.1270773567308,1.62921062276251,0.969762435838129,1.05203729835478,1.3279672796094,0.738050739898011,0.470996183524124,1.60416313098341,2.37162101669719,3.83743743147016,2.94838492669805,3.37293168577281,3.65148218499305,2.41177159752417,2.29163266603278,1.72617682470486,3.24270453550071,1.92192989231657,2.87536413054709,2.232845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| ||
|EntrezGene=18541 | |||
|HGNC= | |||
|MCL_coexpression_id=32 | |||
|UniProt=Q3TQR8 | |||
|association_with_transcript=113bp_to_ENSMUST00000171940_5end | |||
|description=CAGE_peak_2_at_Pcnt_5end | |||
|id=chr10:75905394..75905417,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!6.88e-15!69;UBERON:0004921!2.39e-14!126;UBERON:0004185!2.39e-14!126;UBERON:0004119!2.58e-14!130;UBERON:0000925!2.58e-14!130;UBERON:0006595!2.58e-14!130;UBERON:0001007!2.78e-14!128;UBERON:0001555!2.78e-14!128;UBERON:0007026!2.78e-14!128;UBERON:0001041!3.78e-13!92;UBERON:0000077!5.73e-12!97;UBERON:0000065!7.64e-11!41;UBERON:0001004!1.71e-10!42;UBERON:0003929!6.31e-09!55;UBERON:0005057!2.25e-08!51;UBERON:0002048!1.36e-07!14;UBERON:0000117!1.36e-07!14;UBERON:0000171!1.36e-07!14;UBERON:0000170!1.36e-07!14;UBERON:0005597!1.36e-07!14;UBERON:0000118!1.36e-07!14;UBERON:0004177!8.30e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001041,1.72e-16,80;UBERON:0004921,2.93e-16,114;UBERON:0004119,5.42e-16,118;UBERON:0000925,5.42e-16,118;UBERON:0006595,5.42e-16,118;UBERON:0001007,5.51e-16,116;UBERON:0001555,5.51e-16,116;UBERON:0007026,5.51e-16,116;UBERON:0005911,6.61e-16,69;UBERON:0000065,9.75e-12,41;UBERON:0001004,2.33e-11,42;UBERON:0003929,1.25e-09,55;UBERON:0002048,8.05e-08,14;UBERON:0000117,8.05e-08,14;UBERON:0000171,8.05e-08,14;UBERON:0000170,8.05e-08,14;UBERON:0005597,8.05e-08,14;UBERON:0000118,8.05e-08,14;UBERON:0004177,1.83e-07,29;UBERON:0005057,1.83e-07,29 | |||
|phase1_expression=0.480446541314382,2.09385244583617,3.63999391511629,4.83942738090928,4.00716583957078,2.51818907867835,2.10251376535973,7.618276083053,3.801295498095,6.78787126333781,0.68487187290202,0.398860794976682,6.50562773738582,6.8187913886818,2.99798785634096,4.45445588257617,2.79824751251259,2.05050407482854,1.7824876368746,0.84877930359606,4.33720779770456,1.09220046320974,0.783599367416806,2.71987118748791,0.91763712426868,1.14846392823004,2.15380998079537,3.23206849028834,2.28028103347649,3.2763916868791,1.10865255327652,4.44521471421742,4.92051830067656,0,3.17736781726402,2.65975432573588,3.26670970019791,5.4409111995798,3.1253413780952,2.09409497589519,4.70585190424811,2.04913645487534,2.91306211818692,0.755380907853464,0.608261587317087,0.183546752161682,0.782391344348039,0.65407546914134,0.439372365468944,1.36100929351998,0.279972843250725,0,3.18786951509699,13.7818806982155,8.4023449785616,0.257259436035947,0.573066879877513,0,0.809265843438391,0.528990979272033,0.633831403506179,0.338844532069132,1.77858959222228,0.449949858640699,0,0,0,1.92109152660777,0.829516898467821,1.21505344498522,0.210324961351382,0.285650984403804,0.220868540951614,1.22490799214954,1.0543001812006,0.919218786610021,0,0.893811366596314,0.307213066512487,0.791317726381163,0.182975287204819,0,0.558365998002762,0,0.30559649555362,1.17851434189467,0.996601765593721,0.186399445825301,0.075726193333184,0.68014404096107,4.63783181922684,0,1.3599426674155,2.15881276655127,0.649776417447669,5.82434953226536,1.68533304158102,1.36344258062446,1.29893002301434,0,0.704217098883403,0,2.54805239706646,0,1.29894624606728,2.28023878927589,0.505524445014783,2.16949371466214,2.58937883647172,0.29688427812965,1.04091196059682,0.608930956624282,0.691846491768175,1.05505848386836,1.41106448562846,0.502666365318702,3.95511948374998,0.144599356919912,2.65383165584962,1.94120219936891,3.3126227769059,2.42437626567611,1.86391761218122,1.17112318804619,1.8850203613211,1.27728527604296,4.07371423320129,5.39912457894067,3.81210681219194,0.898743836428936,0.915001205637253,0.502617408451458,1.39059456153821,0.511430914660661,0.20778804455956,0.324482526135515,1.2220723662038,1.7416975885413,0,1.26265113531884,0.910843100738926,0.919608417733892,1.44049703844279,1.65775299619287,2.65342346690179,2.3060469651273,1.96773621575431,0,0.862271971731369,0.567318240503458,0.879755620819744,1.31517439456545,0.834141747676794,0.696504333044333,2.05782136407943,1.19420560091096,5.61770549850588,6.69104558498259,5.96743348730745,0.414251545071004,0.703578179943289,0.720248245844059,0.710234206755631,1.57411385397923,1.3884040159864,1.39520366850245,1.60964040839772,2.33530684734339,1.81015834904829,0.985004784474571,3.08061476274252,2.04679982395465,1.09775057645525,3.89198614405078,0.210289948564127,0.92614151141356,1.65209391491899,1.58670339998127,1.06644125267617,0.696710015581316,2.83508414908605,1.4117846723634,1.33426826306922,1.52180500890047,3.32170343081158,0.988193728344065,1.50801125280162,1.98956472041151,1.75467678407208,0.898819408654221,4.32276099749388,3.98282546508734,0.379335801906163,1.71372768914593,1.1270773567308,1.62921062276251,0.969762435838129,1.05203729835478,1.3279672796094,0.738050739898011,0.470996183524124,1.60416313098341,2.37162101669719,3.83743743147016,2.94838492669805,3.37293168577281,3.65148218499305,2.41177159752417,2.29163266603278,1.72617682470486,3.24270453550071,1.92192989231657,2.87536413054709,2.23284568601102,1.5601883655728,1.76805214562978,1.79397413521912,4.82443521363367,14.4107488329952,1.32643988239339,2.11854469374634,2.71592137240301,3.52035372432753,9.04533790185805,9.04565835366852,27.9041116436652,9.14283835815908,10.4088404134924,7.97273843287435,15.2392882685636,11.2245238212832,16.7792907954553,0,0,0.983528546038072,0.827810238914197,0.642202359951168,0.586058432961016,0.163934945376675,3.7870639080656,1.89304931649754,1.95219372148319,1.07711698866399,1.43381278771531,1.55959071857676,2.54768877709949,0.809621403349789,0.876767573733936,1.58115111178609,0.321321316421807,0.99358059645788,0.890328018336276,0.977321756121456,1.31976098378028,0,2.18502572539483,0.604647113929502,1.50884063804718,1.18120757152309,0,1.55056975900933,1.81766864738753,0.356497378384721,3.16036757935816,2.10837217149998,4.12542172992747,1.02131881726136,1.26042765821917,1.03486947026204,0.428674070063185,0.709360934569094,1.07021290561242,0.987294123612726,0.608929898229199,1.64270195644597,1.90648863777438,0.882113592219848,2.63818004706368,2.58343082713449,1.5078231232039,0.716234064018819,1.64140899745061,2.62332752966866,0.18542530201051,3.93003025835061,1.65109494370578,1.85194527369712,3.57900068308913,5.60446333656203,2.51655990527175,3.56954702987096,4.47844647435706,5.94259887359022,0.954670618015114,1.89801596148681,2.23651413839534,2.37611749807963,3.76358932826044,5.02233896616208,2.02296519577231,3.80205896336545,5.75863072364865,4.79575401179634,1.24267862617385,1.12738587736838,2.69129782879162,2.812794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| |||
|short_description=p2@Pcnt | |||
}} |
Revision as of 17:24, 12 September 2013
Short description: | p2@Pcnt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pcnt_5end |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | 113bp_to_ENSMUST00000171940_5end |
EntrezGene: | Pcnt |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
foregut | 1.72e-16 | 80 |
subdivision of digestive tract | 2.93e-16 | 114 |
endoderm-derived structure | 5.42e-16 | 118 |
endoderm | 5.42e-16 | 118 |
presumptive endoderm | 5.42e-16 | 118 |
digestive system | 5.51e-16 | 116 |
digestive tract | 5.51e-16 | 116 |
primitive gut | 5.51e-16 | 116 |
endo-epithelium | 6.61e-16 | 69 |
respiratory tract | 9.75e-12 | 41 |
respiratory system | 2.33e-11 | 42 |
gut epithelium | 1.25e-09 | 55 |
lung | 8.05e-08 | 14 |
respiratory tube | 8.05e-08 | 14 |
respiration organ | 8.05e-08 | 14 |
pair of lungs | 8.05e-08 | 14 |
lung primordium | 8.05e-08 | 14 |
lung bud | 8.05e-08 | 14 |
hemopoietic organ | 1.83e-07 | 29 |
immune organ | 1.83e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.