FFCP PHASE1:Mm9::chr11:106186248..106186276,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:106186248..106186276,-|id=chr11:106186248..106186276,-|ontology_enrichment_celltype=CL:0000553!5.62e-11!6;CL:0000556!5.62e-11!6;CL:0000414!3.93e-07!11;CL:0000050!6.34e-07!9|ontology_enrichment_celltype_v019_2=CL:0000553,8.17e-32,6;CL:0000556,8.17e-32,6;CL:0000050,4.09e-21,9;CL:0002027,3.97e-16,3;CL:0002006,3.97e-16,3;CL:0002024,3.97e-16,3;CL:0000839,1.65e-14,13;CL:0000763,1.03e-11,16;CL:0002031,6.14e-10,25;CL:0000049,8.48e-10,19;CL:0000988,1.32e-07,32;CL:0002032,1.32e-07,32;CL:0000037,1.32e-07,32;CL:0000837,1.32e-07,32;CL:0000945,6.50e-07,1;CL:0000236,6.50e-07,1;CL:0000826,6.50e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!2.54e-08!14;UBERON:0003918!2.54e-08!14;UBERON:0005095!2.54e-08!14;UBERON:0007687!2.54e-08!14;UBERON:0003887!3.04e-07!10;UBERON:0009569!4.30e-07!66;UBERON:0005172!4.48e-07!49;UBERON:0005173!4.48e-07!49;UBERON:0002417!4.48e-07!49;UBERON:0000916!4.48e-07!49;UBERON:0006554!5.12e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.03e-11,16;UBERON:0001474,3.78e-11,22;UBERON:0004765,3.78e-11,22;UBERON:0001434,3.78e-11,22;UBERON:0002193,7.68e-10,48;UBERON:0002405,7.68e-10,48;UBERON:0003887,1.27e-08,10;UBERON:0002106,1.45e-08,6;UBERON:0004457,1.45e-08,6;UBERON:0000042,1.45e-08,6;UBERON:0004854,1.45e-08,6;UBERON:0009034,1.45e-08,6;UBERON:0002095,1.45e-08,6;UBERON:0004782,1.45e-08,6;UBERON:0003281,1.45e-08,6;UBERON:0009664,1.45e-08,6;UBERON:0002296,1.45e-08,6;UBERON:0005602,1.45e-08,6;UBERON:0001179,1.45e-08,6;UBERON:0006293,1.45e-08,6;UBERON:0002390,1.67e-08,45;UBERON:0003061,1.67e-08,45;UBERON:0002204,1.91e-07,32;UBERON:0000029,9.48e-07,1;UBERON:0001097,9.48e-07,1;UBERON:0003968,9.48e-07,1;UBERON:0001467,9.48e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33176833270964,3.84703008040669,1.39912375625629,14.9844528545163,18.2362196695633,15.7024171165271,0,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7715649694272,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.5709193985953,10.0985774622397,0,0,0,0.230615497256059,0,0,0,0,0.578397427679647,0.884610551949874,0,1.10420759230197,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,1.36847667671102,0.505445516867349,0,0,0,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,0.610953983535943,0,0.841629838683823,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,1.10851914099963,0,0,0,0,0,0,0,0,0,0,2.29408640602033,2.24490476425664,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0.582961673259701,0,3.41741761595705,0,0,0.753473828018764,6.83471138605126,4.11800711771741,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0,0,0,0|short_description=p@chr11:106186248..106186276,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:106186248..106186276,- | |||
|id=chr11:106186248..106186276,- | |||
|ontology_enrichment_celltype=CL:0000553!5.62e-11!6;CL:0000556!5.62e-11!6;CL:0000414!3.93e-07!11;CL:0000050!6.34e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.17e-32,6;CL:0000556,8.17e-32,6;CL:0000050,4.09e-21,9;CL:0002027,3.97e-16,3;CL:0002006,3.97e-16,3;CL:0002024,3.97e-16,3;CL:0000839,1.65e-14,13;CL:0000763,1.03e-11,16;CL:0002031,6.14e-10,25;CL:0000049,8.48e-10,19;CL:0000988,1.32e-07,32;CL:0002032,1.32e-07,32;CL:0000037,1.32e-07,32;CL:0000837,1.32e-07,32;CL:0000945,6.50e-07,1;CL:0000236,6.50e-07,1;CL:0000826,6.50e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!2.54e-08!14;UBERON:0003918!2.54e-08!14;UBERON:0005095!2.54e-08!14;UBERON:0007687!2.54e-08!14;UBERON:0003887!3.04e-07!10;UBERON:0009569!4.30e-07!66;UBERON:0005172!4.48e-07!49;UBERON:0005173!4.48e-07!49;UBERON:0002417!4.48e-07!49;UBERON:0000916!4.48e-07!49;UBERON:0006554!5.12e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.03e-11,16;UBERON:0001474,3.78e-11,22;UBERON:0004765,3.78e-11,22;UBERON:0001434,3.78e-11,22;UBERON:0002193,7.68e-10,48;UBERON:0002405,7.68e-10,48;UBERON:0003887,1.27e-08,10;UBERON:0002106,1.45e-08,6;UBERON:0004457,1.45e-08,6;UBERON:0000042,1.45e-08,6;UBERON:0004854,1.45e-08,6;UBERON:0009034,1.45e-08,6;UBERON:0002095,1.45e-08,6;UBERON:0004782,1.45e-08,6;UBERON:0003281,1.45e-08,6;UBERON:0009664,1.45e-08,6;UBERON:0002296,1.45e-08,6;UBERON:0005602,1.45e-08,6;UBERON:0001179,1.45e-08,6;UBERON:0006293,1.45e-08,6;UBERON:0002390,1.67e-08,45;UBERON:0003061,1.67e-08,45;UBERON:0002204,1.91e-07,32;UBERON:0000029,9.48e-07,1;UBERON:0001097,9.48e-07,1;UBERON:0003968,9.48e-07,1;UBERON:0001467,9.48e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33176833270964,3.84703008040669,1.39912375625629,14.9844528545163,18.2362196695633,15.7024171165271,0,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7715649694272,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.5709193985953,10.0985774622397,0,0,0,0.230615497256059,0,0,0,0,0.578397427679647,0.884610551949874,0,1.10420759230197,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,1.36847667671102,0.505445516867349,0,0,0,0,0,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.456994050438915,0,0.610953983535943,0,0.841629838683823,0.126473074248515,0,0.156998727841375,0.246794327843601,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,1.10851914099963,0,0,0,0,0,0,0,0,0,0,2.29408640602033,2.24490476425664,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0.632073515871632,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0.582961673259701,0,3.41741761595705,0,0,0.753473828018764,6.83471138605126,4.11800711771741,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p@chr11:106186248..106186276,- | |||
}} |
Revision as of 18:31, 12 September 2013
Short description: | p@chr11:106186248..106186276, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:106186248..106186276, - |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 8.17e-32 | 6 |
megakaryocyte | 8.17e-32 | 6 |
megakaryocyte-erythroid progenitor cell | 4.09e-21 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 3.97e-16 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.97e-16 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.97e-16 | 3 |
myeloid lineage restricted progenitor cell | 1.65e-14 | 13 |
myeloid cell | 1.03e-11 | 16 |
hematopoietic lineage restricted progenitor cell | 6.14e-10 | 25 |
common myeloid progenitor | 8.48e-10 | 19 |
hematopoietic cell | 1.32e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.32e-07 | 32 |
hematopoietic stem cell | 1.32e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.32e-07 | 32 |
lymphocyte of B lineage | 6.50e-07 | 1 |
B cell | 6.50e-07 | 1 |
pro-B cell | 6.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.03e-11 | 16 |
bone element | 3.78e-11 | 22 |
skeletal element | 3.78e-11 | 22 |
skeletal system | 3.78e-11 | 22 |
hemolymphoid system | 7.68e-10 | 48 |
immune system | 7.68e-10 | 48 |
intraembryonic coelom | 1.27e-08 | 10 |
spleen | 1.45e-08 | 6 |
cavity lining | 1.45e-08 | 6 |
serous membrane | 1.45e-08 | 6 |
gastrointestinal system mesentery | 1.45e-08 | 6 |
stomach region | 1.45e-08 | 6 |
mesentery | 1.45e-08 | 6 |
gastrointestinal system serosa | 1.45e-08 | 6 |
mesentery of stomach | 1.45e-08 | 6 |
gut mesentery | 1.45e-08 | 6 |
dorsal mesentery | 1.45e-08 | 6 |
dorsal mesogastrium | 1.45e-08 | 6 |
peritoneal cavity | 1.45e-08 | 6 |
spleen primordium | 1.45e-08 | 6 |
hematopoietic system | 1.67e-08 | 45 |
blood island | 1.67e-08 | 45 |
musculoskeletal system | 1.91e-07 | 32 |
lymph node | 9.48e-07 | 1 |
axillary lymph node | 9.48e-07 | 1 |
peripheral lymph node | 9.48e-07 | 1 |
shoulder | 9.48e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.