FFCP PHASE1:Hg19::chr2:62081626..62081638,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84140|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25808|TSSclassifier=W|UniProt=Q3B820|association_with_transcript=-348bp_to_ENST00000405894,NM_001201543,NM_032180,NR_037710,uc002sbm.3,uc002sbn.3,uc010fcm.1,uc010fcn.1,uc010ypo.1_5end|description=CAGE_peak_3_at_FAM161A_5end|id=chr2:62081626..62081638,-|ontology_enrichment_celltype=CL:0000542!1.99e-11!53;CL:0000051!1.99e-11!53;CL:0000838!3.07e-11!52;CL:0002087!2.09e-07!119;CL:0002031!4.68e-07!124|ontology_enrichment_celltype_v019=CL:0000791;1.28e-09;18!CL:0000789;1.28e-09;18!CL:0002419;1.28e-09;18!CL:0000084;5.30e-09;25!CL:0000624;4.25e-08;6!CL:0000542;9.01e-08;53!CL:0000623;9.61e-08;3|ontology_enrichment_celltype_v019_2=CL:0000838,1.82e-13,52;CL:0000542,3.67e-13,53;CL:0000051,3.67e-13,53;CL:0000791,9.68e-10,18;CL:0000789,9.68e-10,18;CL:0002420,9.68e-10,18;CL:0002419,9.68e-10,18;CL:0000790,9.68e-10,18;CL:0000084,4.26e-09,25;CL:0000827,4.26e-09,25;CL:0000624,2.31e-08,6;CL:0000623,1.14e-07,3;CL:0000825,1.14e-07,3|ontology_enrichment_development_v019=CL:0000790;1.28e-09;18!CL:0000051;9.01e-08;53|ontology_enrichment_disease=DOID:0050687!1.30e-20!143;DOID:305!2.42e-20!106;DOID:162!3.52e-20!235;DOID:14566!7.48e-19!239;DOID:0050686!3.16e-07!137|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!5.89e-08!41;UBERON:0001890!5.89e-08!41;UBERON:0006240!5.89e-08!41;UBERON:0003080!1.50e-07!42;UBERON:0001557!8.68e-07!19|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0.273748850145768,0.251085279189606,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0.154816123316076,0,0.30120591877825,0,0.619737604642413,0.426507697462265,0,0.553995408531877,0.200544447470142,0.868043482863407,0,0,0,0,0.377875943688809,0,0.232429036905685,0,0.619412741790207,0,0,0.236482229888585,0.344745680736619,0,2.70852973188684,0,0,0,0.306083892370903,0,0,0,0,0,0.580418477257168,0.56738522469114,0,0,0,0.217188844705117,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0.285012743741249,0.19891667719909,0,1.75996244461323,0,0.889509253863555,0,0,1.14950487990897,0,0,0.569212969109448,1.17447437874188,0.382273228125229,0,0.560508562981536,0,1.7703879310245,1.96505381374582,4.31763147898969,0.334372990781356,0,0.473447805734733,1.94826728407911,0.111410456885174,0.294605907474837,0,0.812411591295047,0.25618263945135,0.130059347559878,0.328875809207352,0,0,1.33457906845854,0.267540828089713,0,0,0.766440987203842,1.71813722741315,0.506039384039006,0,0,0,0.451725357233318,0,1.24930726552346,0,0,3.02410114837099,2.13952156626806,0.868946423296794,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0,0,0,0,0,0.132957960518865,0.476981248610684,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.518305275076852,0,0.36497735907583,0,0,0,0,0,0.354920400119532,0.337169380156203,0.482022059766964,0.441175890929576,0.217879444092406,0.474541238222193,0.404493924480493,1.37355025587742,1.15424147083917,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0.288239906833923,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.448340575974109,0.985153801009636,3.01878604803324,1.28343036279748,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0.620304078368662,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0,0,0.325378394664303,0.206082023295445,0.457847324091717,0.165018999841176,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,0.185803175125719,0.28853842595289,0.355709216742071,0.637705090915289,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0.425846237690326,1.03051603426729,0,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0,0,0.242721043499027,1.33732061132974,0.852408440419239,0.23874448473769,0,0.921482106297696,0,0.140669416410513,0,0,1.68900326502395,0,0,1.0077309914171,0.102268682502155,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0.197286811273867,0,0,0,0,1.99613798001194,0,0,0,0.1137934482855,0.508507300585533,0.709163045303809,0.344743373241465,1.4580230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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84140 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25808 | |||
|TSSclassifier=W | |||
|UniProt=Q3B820 | |||
|association_with_transcript=-348bp_to_ENST00000405894,NM_001201543,NM_032180,NR_037710,uc002sbm.3,uc002sbn.3,uc010fcm.1,uc010fcn.1,uc010ypo.1_5end | |||
|description=CAGE_peak_3_at_FAM161A_5end | |||
|id=chr2:62081626..62081638,- | |||
|ontology_enrichment_celltype=CL:0000542!1.99e-11!53;CL:0000051!1.99e-11!53;CL:0000838!3.07e-11!52;CL:0002087!2.09e-07!119;CL:0002031!4.68e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.28e-09;18!CL:0000789;1.28e-09;18!CL:0002419;1.28e-09;18!CL:0000084;5.30e-09;25!CL:0000624;4.25e-08;6!CL:0000542;9.01e-08;53!CL:0000623;9.61e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.82e-13,52;CL:0000542,3.67e-13,53;CL:0000051,3.67e-13,53;CL:0000791,9.68e-10,18;CL:0000789,9.68e-10,18;CL:0002420,9.68e-10,18;CL:0002419,9.68e-10,18;CL:0000790,9.68e-10,18;CL:0000084,4.26e-09,25;CL:0000827,4.26e-09,25;CL:0000624,2.31e-08,6;CL:0000623,1.14e-07,3;CL:0000825,1.14e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.28e-09;18!CL:0000051;9.01e-08;53 | |||
|ontology_enrichment_disease=DOID:0050687!1.30e-20!143;DOID:305!2.42e-20!106;DOID:162!3.52e-20!235;DOID:14566!7.48e-19!239;DOID:0050686!3.16e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!5.89e-08!41;UBERON:0001890!5.89e-08!41;UBERON:0006240!5.89e-08!41;UBERON:0003080!1.50e-07!42;UBERON:0001557!8.68e-07!19 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p3@FAM161A | |||
}} |
Revision as of 19:13, 12 September 2013
Short description: | p3@FAM161A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FAM161A_5end |
Coexpression cluster: | NA |
Association with transcript: | -348bp_to_ENST00000405894, NM_001201543, NM_032180, NR_037710, uc002sbm.3, uc002sbn.3, uc010fcm.1, uc010fcn.1, uc010ypo.1_5end |
EntrezGene: | FAM161A |
HGNC: | 25808 |
UniProt: | Q3B820 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.82e-13 | 52 |
lymphocyte | 3.67e-13 | 53 |
common lymphoid progenitor | 3.67e-13 | 53 |
mature alpha-beta T cell | 9.68e-10 | 18 |
alpha-beta T cell | 9.68e-10 | 18 |
immature T cell | 9.68e-10 | 18 |
mature T cell | 9.68e-10 | 18 |
immature alpha-beta T cell | 9.68e-10 | 18 |
T cell | 4.26e-09 | 25 |
pro-T cell | 4.26e-09 | 25 |
CD4-positive, alpha-beta T cell | 2.31e-08 | 6 |
natural killer cell | 1.14e-07 | 3 |
pro-NK cell | 1.14e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.