FFCP PHASE1:Mm9::chr11:23977965..23977974,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14025|HGNC=|MCL_coexpression_id=706|UniProt=Q9QYE3,Q5STS7,Q3TP99,Q3US10,Q5STS9,Q5STS8|association_with_transcript=-81bp_to_ENSMUST00000000881,NM_001159289,NM_001242934,NM_016707,uc007ifs.2,uc007ift.2,uc007ifu.2,uc007ifv.2_5end|description=CAGE_peak_11_at_Bcl11a_5end|id=chr11:23977965..23977974,+|ontology_enrichment_celltype=CL:0000117!4.81e-07!23;CL:0000337!4.81e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,8.24e-16,23;CL:0000337,8.24e-16,23;CL:0002609,2.42e-11,6;CL:0000540,1.08e-09,33;CL:0000047,1.08e-09,33;CL:0000031,1.08e-09,33;CL:0000404,1.08e-09,33;CL:0000393,1.44e-07,39;CL:0000211,1.44e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!2.28e-09!34;UBERON:0001049!3.44e-08!52;UBERON:0005068!3.44e-08!52;UBERON:0006241!3.44e-08!52;UBERON:0007135!3.44e-08!52;UBERON:0002791!3.33e-07!29;UBERON:0003528!3.33e-07!29;UBERON:0001893!3.33e-07!29;UBERON:0000956!5.93e-07!21;UBERON:0001869!5.93e-07!21;UBERON:0000203!5.93e-07!21;UBERON:0002780!6.90e-07!39;UBERON:0001890!6.90e-07!39;UBERON:0006240!6.90e-07!39;UBERON:0003080!8.02e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.33e-15,34;UBERON:0003528,1.60e-11,29;UBERON:0002791,1.60e-11,29;UBERON:0001893,1.60e-11,29;UBERON:0000956,7.72e-10,21;UBERON:0001869,7.72e-10,21;UBERON:0000203,7.72e-10,21;UBERON:0001049,5.14e-08,52;UBERON:0005068,5.14e-08,52;UBERON:0006241,5.14e-08,52;UBERON:0007135,5.14e-08,52;UBERON:0000073,1.56e-07,54;UBERON:0002780,1.68e-07,39;UBERON:0001890,1.68e-07,39;UBERON:0006240,1.68e-07,39;UBERON:0001017,3.16e-07,73;UBERON:0003080,3.26e-07,40;UBERON:0001016,7.07e-07,75|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,1.33243904726265,1.82227740650843,2.09868563438444,2.5236973228659,2.33094537129756,0.84877930359606,0.17008658030214,0.397163804803541,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,0,0,0,0,0,2.02316460859598,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,5.08079100311541,5.13022565660425,4.6271491497304,1.14260393761521,0.441737081903227,2.32732518508413,3.64212789869298,2.75765635983006,0,0.127687338085188,0,1.58263545276233,1.46380229763855,3.64639359389732,0,0,0,1.47314292736834,2.13557521198654,2.42319279572891,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,5.69663344023778,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0,0,0.144599356919912,1.76922110389975,0.161766849947409,0,1.45462575940567,0,0,0.628340120440365,0,0.838705871541442,0,0.127070227073065,0.149790639404823,0.457500602818626,1.13088916901578,2.25971616249959,0.511430914660661,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0.650602214813519,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0.640568601424249,0.0937017245597288,0,3.44908788692548,5.67318240503458,3.51902248327898,0.657587197282725,1.39023624612799,0.348252166522167,0.823128545631774,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0,0.841159794256509,4.01327988279209,0,0.264450566663544,1.70630600428187,0.464473343720877,0.644337306610467,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,2.33583148002532,3.93117990226406,2.47348323623339,2.23146133527353,1.92941727801933,0.25462585178142,0.287696137450811,0,0.549122826376163,0,0,0,0,0,0.482443521363367,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0.160550589987792,0.586058432961016,0,0,0,0,0,0,0,0,0.404810701674894,0,0,1.28528526568723,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.720244376125241,0.517434735131018,0.214337035031592,0.177340233642274,0.356737635204141,0,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.322928853391811,0.72375509913787,0.358117032009409,0.328281799490123,0,0.741701208042039,1.36696704638282,0.412773735926445,0.555583582109135,0.941842285023455,2.46049609897845,1.60144721244566,1.01987057996313,0.839708713941948,1.24379976423981,0,0.632671987162271,0.406638934253697,0.540026704109006,0.627264888043406,0,0.269728692769641,0.0826534557253359,0,0,0,0,0.149516546043979,0.496375471371293,0,0,0,0.117357238645754,0,0,0,0,0,0.810900861160657,1.1298205288131,0.25984164595559,0,0,0,0,0.403865799792591,0,0.100826185136841,0.292373642219257,0.0962118416403295,0,0.453460767230423,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,0.460325236507177,0.572895513439397,2.06223818812425,0,0,0.675022500231806,1.80128481289688,1.81256963593682,0.51776031175182,1.45302286617847,0.798049746802062,2.04880326904961,1.45864030240976,1.46729213839588,2.02227859295016,0.666740183404846,0,0.64183841918363,0.252697211763798,0.25347929989024,1.13175804831646,0.374566029879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| ||
|EntrezGene=14025 | |||
|HGNC= | |||
|MCL_coexpression_id=706 | |||
|UniProt=Q9QYE3,Q5STS7,Q3TP99,Q3US10,Q5STS9,Q5STS8 | |||
|association_with_transcript=-81bp_to_ENSMUST00000000881,NM_001159289,NM_001242934,NM_016707,uc007ifs.2,uc007ift.2,uc007ifu.2,uc007ifv.2_5end | |||
|description=CAGE_peak_11_at_Bcl11a_5end | |||
|id=chr11:23977965..23977974,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.81e-07!23;CL:0000337!4.81e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.24e-16,23;CL:0000337,8.24e-16,23;CL:0002609,2.42e-11,6;CL:0000540,1.08e-09,33;CL:0000047,1.08e-09,33;CL:0000031,1.08e-09,33;CL:0000404,1.08e-09,33;CL:0000393,1.44e-07,39;CL:0000211,1.44e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!2.28e-09!34;UBERON:0001049!3.44e-08!52;UBERON:0005068!3.44e-08!52;UBERON:0006241!3.44e-08!52;UBERON:0007135!3.44e-08!52;UBERON:0002791!3.33e-07!29;UBERON:0003528!3.33e-07!29;UBERON:0001893!3.33e-07!29;UBERON:0000956!5.93e-07!21;UBERON:0001869!5.93e-07!21;UBERON:0000203!5.93e-07!21;UBERON:0002780!6.90e-07!39;UBERON:0001890!6.90e-07!39;UBERON:0006240!6.90e-07!39;UBERON:0003080!8.02e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.33e-15,34;UBERON:0003528,1.60e-11,29;UBERON:0002791,1.60e-11,29;UBERON:0001893,1.60e-11,29;UBERON:0000956,7.72e-10,21;UBERON:0001869,7.72e-10,21;UBERON:0000203,7.72e-10,21;UBERON:0001049,5.14e-08,52;UBERON:0005068,5.14e-08,52;UBERON:0006241,5.14e-08,52;UBERON:0007135,5.14e-08,52;UBERON:0000073,1.56e-07,54;UBERON:0002780,1.68e-07,39;UBERON:0001890,1.68e-07,39;UBERON:0006240,1.68e-07,39;UBERON:0001017,3.16e-07,73;UBERON:0003080,3.26e-07,40;UBERON:0001016,7.07e-07,75 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,1.33243904726265,1.82227740650843,2.09868563438444,2.5236973228659,2.33094537129756,0.84877930359606,0.17008658030214,0.397163804803541,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,0,0,0,0,0,2.02316460859598,3.1739458756322,3.1691570175309,0,0,0,0,0,0,0,5.08079100311541,5.13022565660425,4.6271491497304,1.14260393761521,0.441737081903227,2.32732518508413,3.64212789869298,2.75765635983006,0,0.127687338085188,0,1.58263545276233,1.46380229763855,3.64639359389732,0,0,0,1.47314292736834,2.13557521198654,2.42319279572891,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,5.69663344023778,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0,0,0,0.144599356919912,1.76922110389975,0.161766849947409,0,1.45462575940567,0,0,0.628340120440365,0,0.838705871541442,0,0.127070227073065,0.149790639404823,0.457500602818626,1.13088916901578,2.25971616249959,0.511430914660661,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0.650602214813519,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0.640568601424249,0.0937017245597288,0,3.44908788692548,5.67318240503458,3.51902248327898,0.657587197282725,1.39023624612799,0.348252166522167,0.823128545631774,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0,0.292399974850665,0,0,0.841159794256509,4.01327988279209,0,0.264450566663544,1.70630600428187,0.464473343720877,0.644337306610467,0.201683524623343,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,2.33583148002532,3.93117990226406,2.47348323623339,2.23146133527353,1.92941727801933,0.25462585178142,0.287696137450811,0,0.549122826376163,0,0,0,0,0,0.482443521363367,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,0.160550589987792,0.586058432961016,0,0,0,0,0,0,0,0,0.404810701674894,0,0,1.28528526568723,0.141940085208269,0.35613120733451,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.720244376125241,0.517434735131018,0.214337035031592,0.177340233642274,0.356737635204141,0,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.322928853391811,0.72375509913787,0.358117032009409,0.328281799490123,0,0.741701208042039,1.36696704638282,0.412773735926445,0.555583582109135,0.941842285023455,2.46049609897845,1.60144721244566,1.01987057996313,0.839708713941948,1.24379976423981,0,0.632671987162271,0.406638934253697,0.540026704109006,0.627264888043406,0,0.269728692769641,0.0826534557253359,0,0,0,0,0.149516546043979,0.496375471371293,0,0,0,0.117357238645754,0,0,0,0,0,0.810900861160657,1.1298205288131,0.25984164595559,0,0,0,0,0.403865799792591,0,0.100826185136841,0.292373642219257,0.0962118416403295,0,0.453460767230423,0,0,0,0,0,0.183151624267265,0,0,2.25900737046827,0.460325236507177,0.572895513439397,2.06223818812425,0,0,0.675022500231806,1.80128481289688,1.81256963593682,0.51776031175182,1.45302286617847,0.798049746802062,2.04880326904961,1.45864030240976,1.46729213839588,2.02227859295016,0.666740183404846,0,0.64183841918363,0.252697211763798,0.25347929989024,1.13175804831646,0.37456602987953,0.448176066834085,0.804096565378586,1.90517476513229,0.695305955669133,0.964546102318525,0.824171801606613,0,0.685738504770831,0.354951612318675,0.715308569841963,0.726732083161643,0.470546902076653,0.592302255241736,0.73171189149109,0.526139422875686,0.950628796921032,0.561142271657738,0.474540072496697,0.591026894253381,0.409231043169689,1.08455788830176,0.771626443924566,1.24905288968973,0.701794825336225,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p11@Bcl11a | |||
}} |
Revision as of 19:18, 12 September 2013
Short description: | p11@Bcl11a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Bcl11a_5end |
Coexpression cluster: | MCL_coexpression_mm9:706 |
Association with transcript: | -81bp_to_ENSMUST00000000881, NM_001159289, NM_001242934, NM_016707, uc007ifs.2, uc007ift.2, uc007ifu.2, uc007ifv.2_5end |
EntrezGene: | Bcl11a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.24e-16 | 23 |
neuroblast (sensu Vertebrata) | 8.24e-16 | 23 |
neuron of cerebral cortex | 2.42e-11 | 6 |
neuron | 1.08e-09 | 33 |
neuronal stem cell | 1.08e-09 | 33 |
neuroblast | 1.08e-09 | 33 |
electrically signaling cell | 1.08e-09 | 33 |
electrically responsive cell | 1.44e-07 | 39 |
electrically active cell | 1.44e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
gray matter | 4.33e-15 | 34 |
brain grey matter | 1.60e-11 | 29 |
regional part of telencephalon | 1.60e-11 | 29 |
telencephalon | 1.60e-11 | 29 |
cerebral cortex | 7.72e-10 | 21 |
cerebral hemisphere | 7.72e-10 | 21 |
pallium | 7.72e-10 | 21 |
neural tube | 5.14e-08 | 52 |
neural rod | 5.14e-08 | 52 |
future spinal cord | 5.14e-08 | 52 |
neural keel | 5.14e-08 | 52 |
regional part of nervous system | 1.56e-07 | 54 |
regional part of forebrain | 1.68e-07 | 39 |
forebrain | 1.68e-07 | 39 |
future forebrain | 1.68e-07 | 39 |
central nervous system | 3.16e-07 | 73 |
anterior neural tube | 3.26e-07 | 40 |
nervous system | 7.07e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.