FFCP PHASE1:Mm9::chr11:33947243..33947257,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=16822|HGNC=|MCL_coexpression_id=7|UniProt=Q60787,Q8CAS1|association_with_transcript=42bp_to_NM_010696,uc007iku.1,uc007ikv.1_5end|description=CAGE_peak_3_at_Lcp2_5end|id=chr11:33947243..33947257,+|ontology_enrichment_celltype=CL:0000988!9.35e-09!32;CL:0002032!9.35e-09!32;CL:0000037!9.35e-09!32;CL:0000566!9.35e-09!32;CL:0000837!9.35e-09!32;CL:0000791!1.02e-08!9;CL:0000789!1.02e-08!9;CL:0002420!1.02e-08!9;CL:0002419!1.02e-08!9;CL:0000790!1.02e-08!9;CL:0000624!5.65e-08!8;CL:0002031!2.94e-07!25|ontology_enrichment_celltype_v019_2=CL:0000791,2.08e-24,9;CL:0000789,2.08e-24,9;CL:0002420,2.08e-24,9;CL:0002419,2.08e-24,9;CL:0000790,2.08e-24,9;CL:0000624,4.95e-22,8;CL:0000084,1.23e-19,11;CL:0000827,1.23e-19,11;CL:0000838,7.59e-18,12;CL:0000893,5.15e-17,6;CL:0002489,5.15e-17,6;CL:0000898,5.15e-17,6;CL:0000809,5.15e-17,6;CL:0000810,5.15e-17,6;CL:0000895,5.15e-17,6;CL:0000808,5.15e-17,6;CL:0000894,5.15e-17,6;CL:0000806,5.15e-17,6;CL:0000807,5.15e-17,6;CL:0000805,5.15e-17,6;CL:0002425,5.15e-17,6;CL:0002436,5.15e-17,6;CL:0002427,5.15e-17,6;CL:0002428,5.15e-17,6;CL:0002429,5.15e-17,6;CL:0002433,5.15e-17,6;CL:0002431,5.15e-17,6;CL:0002432,5.15e-17,6;CL:0000542,2.48e-16,13;CL:0000051,2.48e-16,13;CL:0002031,1.08e-15,25;CL:0000738,6.91e-15,17;CL:0002087,6.91e-15,17;CL:0000988,1.30e-11,32;CL:0002032,1.30e-11,32;CL:0000037,1.30e-11,32;CL:0000837,1.30e-11,32;CL:0002320,1.88e-08,46;CL:0000134,1.88e-08,46;CL:0000219,9.48e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.67e-24!70;UBERON:0002390!8.05e-21!45;UBERON:0003061!8.05e-21!45;UBERON:0002193!1.05e-20!48;UBERON:0005057!8.15e-17!51;UBERON:0003081!2.29e-14!88;UBERON:0004177!6.23e-14!29;UBERON:0002530!1.57e-10!65;UBERON:0002370!3.09e-10!23;UBERON:0000974!3.09e-10!23;UBERON:0004807!3.09e-10!23;UBERON:0005058!3.09e-10!23;UBERON:0003351!3.09e-10!23;UBERON:0009113!3.09e-10!23;UBERON:0003295!3.09e-10!23;UBERON:0009722!3.09e-10!23;UBERON:0005562!3.09e-10!23;UBERON:0007690!3.09e-10!23;UBERON:0002368!9.78e-10!60;UBERON:0006562!1.96e-09!24;UBERON:0003408!1.96e-09!24;UBERON:0001557!1.96e-09!24;UBERON:0001042!1.96e-09!24;UBERON:0008814!1.96e-09!24;UBERON:0009145!1.96e-09!24;UBERON:0003929!1.14e-08!55;UBERON:0000926!1.29e-08!193;UBERON:0004120!1.29e-08!193;UBERON:0006603!1.29e-08!193;UBERON:0001041!2.49e-08!92;UBERON:0002371!1.30e-07!16;UBERON:0001474!1.58e-07!22;UBERON:0004765!1.58e-07!22;UBERON:0001434!1.58e-07!22;UBERON:0005911!1.66e-07!69;UBERON:0000072!1.97e-07!27;UBERON:0000949!2.30e-07!72;UBERON:0000077!2.31e-07!97;UBERON:0003104!3.49e-07!131;UBERON:0009142!3.49e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.66e-19,48;UBERON:0002405,1.66e-19,48;UBERON:0002390,8.23e-19,45;UBERON:0003061,8.23e-19,45;UBERON:0004177,1.68e-17,29;UBERON:0005057,1.68e-17,29;UBERON:0000077,6.68e-14,35;UBERON:0002370,3.38e-12,23;UBERON:0000974,3.38e-12,23;UBERON:0004807,3.38e-12,23;UBERON:0005058,3.38e-12,23;UBERON:0003351,3.38e-12,23;UBERON:0009113,3.38e-12,23;UBERON:0003295,3.38e-12,23;UBERON:0009722,3.38e-12,23;UBERON:0005562,3.38e-12,23;UBERON:0007690,3.38e-12,23;UBERON:0006562,1.37e-11,24;UBERON:0003408,1.37e-11,24;UBERON:0001557,1.37e-11,24;UBERON:0001042,1.37e-11,24;UBERON:0008814,1.37e-11,24;UBERON:0009145,1.37e-11,24;UBERON:0000072,4.84e-10,27;UBERON:0003929,7.43e-10,55;UBERON:0001041,1.53e-09,80;UBERON:0003081,1.56e-09,87;UBERON:0002368,1.02e-08,60;UBERON:0002384,1.88e-08,46;UBERON:0002530,9.25e-08,65;UBERON:0000490,1.38e-07,66;UBERON:0005911,4.26e-07,69;UBERON:0007811,5.84e-07,36;UBERON:0002106,6.60e-07,6;UBERON:0004457,6.60e-07,6;UBERON:0000042,6.60e-07,6;UBERON:0004854,6.60e-07,6;UBERON:0009034,6.60e-07,6;UBERON:0002095,6.60e-07,6;UBERON:0004782,6.60e-07,6;UBERON:0003281,6.60e-07,6;UBERON:0009664,6.60e-07,6;UBERON:0002296,6.60e-07,6;UBERON:0005602,6.60e-07,6;UBERON:0001179,6.60e-07,6;UBERON:0006293,6.60e-07,6|phase1_expression=0,0,0,0,0,0,0,4.77756296733832,62.51019263534,77.2412936862578,11.8140398075598,13.8803556651885,3.25281386869291,3.14713448708391,1.33243904726265,1.41732687172878,0.699561878128147,0.946386496074713,1.23402990245165,0.84877930359606,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,1.76469446409304,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0,4.35217285206807,2.01656279485478,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0.449949858640699,0.988866362566974,1.4209602298922,0.898800331555214,0.384218305321555,0,0.135005938331691,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.569486723196412,0,0.227178579999552,0.0755715601067855,0.869593466105033,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,8.2860122767095,0.445326417194474,0,0,0.461230994512117,0.150722640552623,0.587943535678524,0,0,0.433798070759735,1.76922110389975,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0.255457055208591,0.599075622529601,0.599902730993408,0.635351135365324,0,0.457500602818626,0,0,0,0,0,0.101839363850316,1.11966273549084,0,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0,0.702213187313235,0.257347907114715,0.568326998791185,0.207125772535502,0.469052119962192,0,0,0.393528463494808,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0.439100230582101,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.795825888164603,0.58489226135736,0,0.432276099749388,0.398282546508734,0,0,1.1270773567308,0,0,0.140271639780637,0,0,0.156998727841375,0,0.592905254174298,0.500535317148282,0.786235980452812,1.12431056192427,1.01430060694251,0.72353147925725,0.50925170356284,1.72617682470486,0.486405680325106,1.09824565275233,5.75072826109418,1.11642284300551,0,0.252578877947112,0.179397413521912,0,0.739012760666419,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0.664394068946325,0.159454768657487,0.491589944147214,0,0.144649058581512,0,2.17562273527484,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0,1.70870880797853,0.82554747185289,0.740778109478847,1.69531611304222,1.36694227721025,1.83022538565218,1.01987057996313,0.279902904647316,0.829199842826543,0,0.158167996790568,0,0.216010681643603,0,0,0.134864346384821,0.41326727862668,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,2.21207784439725,0.202725215290164,0.410843828659309,0.389762468933385,0.895133478337407,0.993406773906324,0.961563596159751,1.47689527174577,0.908698049533329,0.838274873204998,1.61321896218945,1.8516997340553,1.34696578296461,0.935015217452552,0,0,0,0,0,0,0.36630324853453,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.798049746802062,0,0,0.209613162627982,0.551530525350042,0,0,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0.526139422875686,0,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0.441182838239031,0.231867835620421|short_description=p3@Lcp2}} | ||
|EntrezGene=16822 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=Q60787,Q8CAS1 | |||
|association_with_transcript=42bp_to_NM_010696,uc007iku.1,uc007ikv.1_5end | |||
|description=CAGE_peak_3_at_Lcp2_5end | |||
|id=chr11:33947243..33947257,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.35e-09!32;CL:0002032!9.35e-09!32;CL:0000037!9.35e-09!32;CL:0000566!9.35e-09!32;CL:0000837!9.35e-09!32;CL:0000791!1.02e-08!9;CL:0000789!1.02e-08!9;CL:0002420!1.02e-08!9;CL:0002419!1.02e-08!9;CL:0000790!1.02e-08!9;CL:0000624!5.65e-08!8;CL:0002031!2.94e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.08e-24,9;CL:0000789,2.08e-24,9;CL:0002420,2.08e-24,9;CL:0002419,2.08e-24,9;CL:0000790,2.08e-24,9;CL:0000624,4.95e-22,8;CL:0000084,1.23e-19,11;CL:0000827,1.23e-19,11;CL:0000838,7.59e-18,12;CL:0000893,5.15e-17,6;CL:0002489,5.15e-17,6;CL:0000898,5.15e-17,6;CL:0000809,5.15e-17,6;CL:0000810,5.15e-17,6;CL:0000895,5.15e-17,6;CL:0000808,5.15e-17,6;CL:0000894,5.15e-17,6;CL:0000806,5.15e-17,6;CL:0000807,5.15e-17,6;CL:0000805,5.15e-17,6;CL:0002425,5.15e-17,6;CL:0002436,5.15e-17,6;CL:0002427,5.15e-17,6;CL:0002428,5.15e-17,6;CL:0002429,5.15e-17,6;CL:0002433,5.15e-17,6;CL:0002431,5.15e-17,6;CL:0002432,5.15e-17,6;CL:0000542,2.48e-16,13;CL:0000051,2.48e-16,13;CL:0002031,1.08e-15,25;CL:0000738,6.91e-15,17;CL:0002087,6.91e-15,17;CL:0000988,1.30e-11,32;CL:0002032,1.30e-11,32;CL:0000037,1.30e-11,32;CL:0000837,1.30e-11,32;CL:0002320,1.88e-08,46;CL:0000134,1.88e-08,46;CL:0000219,9.48e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.67e-24!70;UBERON:0002390!8.05e-21!45;UBERON:0003061!8.05e-21!45;UBERON:0002193!1.05e-20!48;UBERON:0005057!8.15e-17!51;UBERON:0003081!2.29e-14!88;UBERON:0004177!6.23e-14!29;UBERON:0002530!1.57e-10!65;UBERON:0002370!3.09e-10!23;UBERON:0000974!3.09e-10!23;UBERON:0004807!3.09e-10!23;UBERON:0005058!3.09e-10!23;UBERON:0003351!3.09e-10!23;UBERON:0009113!3.09e-10!23;UBERON:0003295!3.09e-10!23;UBERON:0009722!3.09e-10!23;UBERON:0005562!3.09e-10!23;UBERON:0007690!3.09e-10!23;UBERON:0002368!9.78e-10!60;UBERON:0006562!1.96e-09!24;UBERON:0003408!1.96e-09!24;UBERON:0001557!1.96e-09!24;UBERON:0001042!1.96e-09!24;UBERON:0008814!1.96e-09!24;UBERON:0009145!1.96e-09!24;UBERON:0003929!1.14e-08!55;UBERON:0000926!1.29e-08!193;UBERON:0004120!1.29e-08!193;UBERON:0006603!1.29e-08!193;UBERON:0001041!2.49e-08!92;UBERON:0002371!1.30e-07!16;UBERON:0001474!1.58e-07!22;UBERON:0004765!1.58e-07!22;UBERON:0001434!1.58e-07!22;UBERON:0005911!1.66e-07!69;UBERON:0000072!1.97e-07!27;UBERON:0000949!2.30e-07!72;UBERON:0000077!2.31e-07!97;UBERON:0003104!3.49e-07!131;UBERON:0009142!3.49e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.66e-19,48;UBERON:0002405,1.66e-19,48;UBERON:0002390,8.23e-19,45;UBERON:0003061,8.23e-19,45;UBERON:0004177,1.68e-17,29;UBERON:0005057,1.68e-17,29;UBERON:0000077,6.68e-14,35;UBERON:0002370,3.38e-12,23;UBERON:0000974,3.38e-12,23;UBERON:0004807,3.38e-12,23;UBERON:0005058,3.38e-12,23;UBERON:0003351,3.38e-12,23;UBERON:0009113,3.38e-12,23;UBERON:0003295,3.38e-12,23;UBERON:0009722,3.38e-12,23;UBERON:0005562,3.38e-12,23;UBERON:0007690,3.38e-12,23;UBERON:0006562,1.37e-11,24;UBERON:0003408,1.37e-11,24;UBERON:0001557,1.37e-11,24;UBERON:0001042,1.37e-11,24;UBERON:0008814,1.37e-11,24;UBERON:0009145,1.37e-11,24;UBERON:0000072,4.84e-10,27;UBERON:0003929,7.43e-10,55;UBERON:0001041,1.53e-09,80;UBERON:0003081,1.56e-09,87;UBERON:0002368,1.02e-08,60;UBERON:0002384,1.88e-08,46;UBERON:0002530,9.25e-08,65;UBERON:0000490,1.38e-07,66;UBERON:0005911,4.26e-07,69;UBERON:0007811,5.84e-07,36;UBERON:0002106,6.60e-07,6;UBERON:0004457,6.60e-07,6;UBERON:0000042,6.60e-07,6;UBERON:0004854,6.60e-07,6;UBERON:0009034,6.60e-07,6;UBERON:0002095,6.60e-07,6;UBERON:0004782,6.60e-07,6;UBERON:0003281,6.60e-07,6;UBERON:0009664,6.60e-07,6;UBERON:0002296,6.60e-07,6;UBERON:0005602,6.60e-07,6;UBERON:0001179,6.60e-07,6;UBERON:0006293,6.60e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,4.77756296733832,62.51019263534,77.2412936862578,11.8140398075598,13.8803556651885,3.25281386869291,3.14713448708391,1.33243904726265,1.41732687172878,0.699561878128147,0.946386496074713,1.23402990245165,0.84877930359606,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,1.76469446409304,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0,4.35217285206807,2.01656279485478,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0.449949858640699,0.988866362566974,1.4209602298922,0.898800331555214,0.384218305321555,0,0.135005938331691,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0.569486723196412,0,0.227178579999552,0.0755715601067855,0.869593466105033,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,8.2860122767095,0.445326417194474,0,0,0.461230994512117,0.150722640552623,0.587943535678524,0,0,0.433798070759735,1.76922110389975,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0.255457055208591,0.599075622529601,0.599902730993408,0.635351135365324,0,0.457500602818626,0,0,0,0,0,0.101839363850316,1.11966273549084,0,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0,0,0,0,0.348252166522167,0.205782136407943,0,0.702213187313235,0.257347907114715,0.568326998791185,0.207125772535502,0.469052119962192,0,0,0.393528463494808,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0.439100230582101,0,0,0,0,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.795825888164603,0.58489226135736,0,0.432276099749388,0.398282546508734,0,0,1.1270773567308,0,0,0.140271639780637,0,0,0.156998727841375,0,0.592905254174298,0.500535317148282,0.786235980452812,1.12431056192427,1.01430060694251,0.72353147925725,0.50925170356284,1.72617682470486,0.486405680325106,1.09824565275233,5.75072826109418,1.11642284300551,0,0.252578877947112,0.179397413521912,0,0.739012760666419,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0.664394068946325,0.159454768657487,0.491589944147214,0,0.144649058581512,0,2.17562273527484,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0.516856586336442,0.363533729477506,0.712994756769443,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0,1.70870880797853,0.82554747185289,0.740778109478847,1.69531611304222,1.36694227721025,1.83022538565218,1.01987057996313,0.279902904647316,0.829199842826543,0,0.158167996790568,0,0.216010681643603,0,0,0.134864346384821,0.41326727862668,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,2.21207784439725,0.202725215290164,0.410843828659309,0.389762468933385,0.895133478337407,0.993406773906324,0.961563596159751,1.47689527174577,0.908698049533329,0.838274873204998,1.61321896218945,1.8516997340553,1.34696578296461,0.935015217452552,0,0,0,0,0,0,0.36630324853453,0,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.798049746802062,0,0,0.209613162627982,0.551530525350042,0,0,0.320919209591815,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0.526139422875686,0,0,0.237270036248348,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0,0,0.441182838239031,0.231867835620421 | |||
|short_description=p3@Lcp2 | |||
}} |
Revision as of 19:32, 12 September 2013
Short description: | p3@Lcp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lcp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 42bp_to_NM_010696, uc007iku.1, uc007ikv.1_5end |
EntrezGene: | Lcp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.