FFCP PHASE1:Hg19::chr2:78693147..78693150,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1914|description=CAGE_peak_at_chr2:78693147..78693150,-|id=chr2:78693147..78693150,-|ontology_enrichment_celltype=CL:0002322!3.66e-07!5;CL:0002150!5.07e-07!3;CL:0000861!5.07e-07!3|ontology_enrichment_celltype_v019=CL:0002553;1.19e-23;1!CL:0000182;4.05e-17;12!CL:1000415;2.59e-12;2!CL:0000083;6.68e-07;4|ontology_enrichment_celltype_v019_2=CL:0002553,1.34e-23,1;CL:0000182,3.44e-17,12;CL:1000415,1.85e-12,2;CL:0000083,6.50e-07,4|ontology_enrichment_development_v019=UBERON:0004161;1.32e-18;11!UBERON:0009497;7.36e-16;13!UBERON:0001041;3.59e-12;30|ontology_enrichment_disease=DOID:14566!1.89e-20!239;DOID:162!2.06e-19!235;DOID:305!5.92e-17!106;DOID:0050687!1.11e-14!143;DOID:3119!3.66e-07!14|ontology_enrichment_disease_v019=DOID:1799;1.19e-23;1!DOID:10165;1.19e-23;1!DOID:1798;1.19e-23;1!DOID:0050619;3.28e-23;1!DOID:3151;3.28e-23;1!DOID:1357;3.28e-23;1!DOID:5662;3.28e-23;1!DOID:3149;3.28e-23;1!DOID:3451;2.59e-12;2!DOID:4159;2.59e-12;2!DOID:0060122;2.59e-12;2!DOID:1793;6.68e-07;4|ontology_enrichment_disease_v019_2=DOID:1799,1.07e-23,1;DOID:10165,1.07e-23,1;DOID:1798,1.07e-23,1;DOID:5662,3.28e-23,1;DOID:0050619,5.13e-23,1;DOID:1357,5.13e-23,1;DOID:3151,6.40e-23,1;DOID:3149,6.40e-23,1;DOID:3451,3.62e-12,2;DOID:4159,3.62e-12,2;DOID:0060122,3.62e-12,2;DOID:305,1.61e-07,106;DOID:162,2.69e-07,235;DOID:14566,3.89e-07,239;DOID:1793,6.50e-07,4|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001764;3.28e-23;1!UBERON:0001825;3.28e-23;1!UBERON:0002423;1.89e-14;25!UBERON:0002107;4.52e-11;19!UBERON:0006925;4.52e-11;19!UBERON:0002110;1.21e-08;3!UBERON:0000949;2.35e-07;43!UBERON:0002365;3.10e-07;31!UBERON:0002330;3.10e-07;31!UBERON:0000014;8.61e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001764,5.13e-23,1;UBERON:0001825,5.13e-23,1;UBERON:0009497,1.53e-14,25;UBERON:0000015,1.53e-14,25;UBERON:0002423,1.53e-14,25;UBERON:0006235,1.53e-14,25;UBERON:0004161,1.53e-14,25;UBERON:0002107,4.07e-11,19;UBERON:0006925,4.07e-11,19;UBERON:0008836,4.07e-11,19;UBERON:0008835,1.09e-09,22;UBERON:0003894,1.09e-09,22;UBERON:0009854,2.70e-09,23;UBERON:0002110,9.66e-09,3;UBERON:0006242,9.66e-09,3;UBERON:0007499,1.34e-08,25;UBERON:0009856,2.72e-08,26;UBERON:0000949,2.88e-08,45;UBERON:0005177,6.74e-08,101;UBERON:0002365,4.77e-07,31;UBERON:0002330,4.77e-07,31;UBERON:0003929,6.31e-07,54;UBERON:0005172,6.31e-07,54;UBERON:0005173,6.31e-07,54;UBERON:0005911,6.59e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0.269272933229316,0,0,0,0.533034776018635,0,0,0,0.676786981851542,0.588187602953219,0.167821586975843,0,0,0,0.489698424477443,0.141353071433941,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0.387025325156341,0.365446585430928,0.0821154570532092,0,0,0,0.411125773940253,0.397429223405979,0,1.95551382734803,0.561111741760736,0,0.39961921916426,0,0,0.686379991447858,0,0,0,0.407712618220842,0.732219924186332,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41809728153003,0.824158583811665,1.48287796479207,0,0,0,0,0,0.137539436597234,0,0,0,0,1.0063040627978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0,0,1.24980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.17908884108148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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1914 | |||
|description=CAGE_peak_at_chr2:78693147..78693150,- | |||
|id=chr2:78693147..78693150,- | |||
|ontology_enrichment_celltype=CL:0002322!3.66e-07!5;CL:0002150!5.07e-07!3;CL:0000861!5.07e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.19e-23;1!CL:0000182;4.05e-17;12!CL:1000415;2.59e-12;2!CL:0000083;6.68e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.34e-23,1;CL:0000182,3.44e-17,12;CL:1000415,1.85e-12,2;CL:0000083,6.50e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.32e-18;11!UBERON:0009497;7.36e-16;13!UBERON:0001041;3.59e-12;30 | |||
|ontology_enrichment_disease=DOID:14566!1.89e-20!239;DOID:162!2.06e-19!235;DOID:305!5.92e-17!106;DOID:0050687!1.11e-14!143;DOID:3119!3.66e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.19e-23;1!DOID:10165;1.19e-23;1!DOID:1798;1.19e-23;1!DOID:0050619;3.28e-23;1!DOID:3151;3.28e-23;1!DOID:1357;3.28e-23;1!DOID:5662;3.28e-23;1!DOID:3149;3.28e-23;1!DOID:3451;2.59e-12;2!DOID:4159;2.59e-12;2!DOID:0060122;2.59e-12;2!DOID:1793;6.68e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.07e-23,1;DOID:10165,1.07e-23,1;DOID:1798,1.07e-23,1;DOID:5662,3.28e-23,1;DOID:0050619,5.13e-23,1;DOID:1357,5.13e-23,1;DOID:3151,6.40e-23,1;DOID:3149,6.40e-23,1;DOID:3451,3.62e-12,2;DOID:4159,3.62e-12,2;DOID:0060122,3.62e-12,2;DOID:305,1.61e-07,106;DOID:162,2.69e-07,235;DOID:14566,3.89e-07,239;DOID:1793,6.50e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;3.28e-23;1!UBERON:0001825;3.28e-23;1!UBERON:0002423;1.89e-14;25!UBERON:0002107;4.52e-11;19!UBERON:0006925;4.52e-11;19!UBERON:0002110;1.21e-08;3!UBERON:0000949;2.35e-07;43!UBERON:0002365;3.10e-07;31!UBERON:0002330;3.10e-07;31!UBERON:0000014;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,5.13e-23,1;UBERON:0001825,5.13e-23,1;UBERON:0009497,1.53e-14,25;UBERON:0000015,1.53e-14,25;UBERON:0002423,1.53e-14,25;UBERON:0006235,1.53e-14,25;UBERON:0004161,1.53e-14,25;UBERON:0002107,4.07e-11,19;UBERON:0006925,4.07e-11,19;UBERON:0008836,4.07e-11,19;UBERON:0008835,1.09e-09,22;UBERON:0003894,1.09e-09,22;UBERON:0009854,2.70e-09,23;UBERON:0002110,9.66e-09,3;UBERON:0006242,9.66e-09,3;UBERON:0007499,1.34e-08,25;UBERON:0009856,2.72e-08,26;UBERON:0000949,2.88e-08,45;UBERON:0005177,6.74e-08,101;UBERON:0002365,4.77e-07,31;UBERON:0002330,4.77e-07,31;UBERON:0003929,6.31e-07,54;UBERON:0005172,6.31e-07,54;UBERON:0005173,6.31e-07,54;UBERON:0005911,6.59e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0.269272933229316,0,0,0,0.533034776018635,0,0,0,0.676786981851542,0.588187602953219,0.167821586975843,0,0,0,0.489698424477443,0.141353071433941,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0.387025325156341,0.365446585430928,0.0821154570532092,0,0,0,0.411125773940253,0.397429223405979,0,1.95551382734803,0.561111741760736,0,0.39961921916426,0,0,0.686379991447858,0,0,0,0.407712618220842,0.732219924186332,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41809728153003,0.824158583811665,1.48287796479207,0,0,0,0,0,0.137539436597234,0,0,0,0,1.0063040627978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09937867375164,0,0,0,0,0,0,0,1.24980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0.491545817507439,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0.159633859057151,0,0,0,0,0,0.392590874004102,0,0,0,0,0,0,0,0.40341013740704,0,2.61906694481422,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37190407549935,0,0,0.236387681767936,0,0,0.314231179832004,0.280272163313789,0,0,0,0,0,0.464965701472501,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0.447421727191169,0.785201868921944,0.487671699929078,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0.940634592723046,0,0,0,0,0,0,0,0,0.299823467774787,0.178553938605658,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.327796715891087,0.760191006068622,0.407955318967927,0.26721740526556,0.551369397209069,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:78693147..78693150,- | |||
}} |
Revision as of 19:53, 12 September 2013
Short description: | p@chr2:78693147..78693150, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:78693147..78693150, - |
Coexpression cluster: | C1914_signet_nonsmall_gall_pancreatic_smallcell_hepatocellular_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.34e-23 | 1 |
hepatocyte | 3.44e-17 | 12 |
epithelial cell of gall bladder | 1.85e-12 | 2 |
epithelial cell of pancreas | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 5.13e-23 | 1 |
paranasal sinus | 5.13e-23 | 1 |
epithelium of foregut-midgut junction | 1.53e-14 | 25 |
anatomical boundary | 1.53e-14 | 25 |
hepatobiliary system | 1.53e-14 | 25 |
foregut-midgut junction | 1.53e-14 | 25 |
septum transversum | 1.53e-14 | 25 |
liver | 4.07e-11 | 19 |
digestive gland | 4.07e-11 | 19 |
liver bud | 4.07e-11 | 19 |
hepatic diverticulum | 1.09e-09 | 22 |
liver primordium | 1.09e-09 | 22 |
digestive tract diverticulum | 2.70e-09 | 23 |
gallbladder | 9.66e-09 | 3 |
gall bladder primordium | 9.66e-09 | 3 |
epithelial sac | 1.34e-08 | 25 |
sac | 2.72e-08 | 26 |
endocrine system | 2.88e-08 | 45 |
trunk region element | 6.74e-08 | 101 |
exocrine gland | 4.77e-07 | 31 |
exocrine system | 4.77e-07 | 31 |
gut epithelium | 6.31e-07 | 54 |
abdomen element | 6.31e-07 | 54 |
abdominal segment element | 6.31e-07 | 54 |
endo-epithelium | 6.59e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.07e-23 | 1 |
endocrine pancreas cancer | 1.07e-23 | 1 |
pancreatic endocrine carcinoma | 1.07e-23 | 1 |
pleomorphic carcinoma | 3.28e-23 | 1 |
paranasal sinus cancer | 5.13e-23 | 1 |
maxillary sinus cancer | 5.13e-23 | 1 |
skin squamous cell carcinoma | 6.40e-23 | 1 |
keratoacanthoma | 6.40e-23 | 1 |
skin carcinoma | 3.62e-12 | 2 |
skin cancer | 3.62e-12 | 2 |
integumentary system cancer | 3.62e-12 | 2 |
carcinoma | 1.61e-07 | 106 |
cancer | 2.69e-07 | 235 |
disease of cellular proliferation | 3.89e-07 | 239 |
pancreatic cancer | 6.50e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.