FFCP PHASE1:Mm9::chr11:6447278..6447298,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=384|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:6447278..6447298,+|id=chr11:6447278..6447298,+|ontology_enrichment_celltype=CL:0000988!2.87e-13!32;CL:0002032!2.87e-13!32;CL:0000037!2.87e-13!32;CL:0000566!2.87e-13!32;CL:0000837!2.87e-13!32;CL:0002320!1.43e-08!46;CL:0000134!1.43e-08!46;CL:0000034!1.90e-08!97;CL:0000049!4.25e-08!19;CL:0002031!1.61e-07!25;CL:0000219!2.56e-07!54;CL:0000838!4.61e-07!12|ontology_enrichment_celltype_v019_2=CL:0000049,9.91e-15,19;CL:0000988,4.88e-13,32;CL:0002032,4.88e-13,32;CL:0000037,4.88e-13,32;CL:0000837,4.88e-13,32;CL:0000034,4.85e-10,97;CL:0002320,1.25e-08,46;CL:0000134,1.25e-08,46;CL:0000219,3.92e-07,54;CL:0000763,5.94e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,7.10e-15,3;DOID:4045,7.10e-15,3;DOID:0050686,8.99e-13,6|ontology_enrichment_uberon=UBERON:0002384!1.43e-08!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.25e-08,46|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.985521055061667,0.936258105287974,0,0,0.342401459862411,0,0,0.202475267389826,0,0.946386496074713,1.09691546884591,2.54633791078818,0,0.397163804803541,1.04479915655574,0.319984845586813,0,0,0,0,0,0,0,1.90509202037889,0,0,0,0,0.204169356262369,5.02237956884289,1.5626706890476,3.66466620781659,2.94115744015507,1.36609096991689,4.85510353031154,0,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0,0,0,3.18786951509699,0,0.336093799142464,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,4.43315960671905,8.39863823390771,2.54140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0.702213187313235,2.31613116403244,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0,4.07948231985253,6.15786390224095,3.73139929271944,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p@chr11:6447278..6447298,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=384 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:6447278..6447298,+ | |||
|id=chr11:6447278..6447298,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.87e-13!32;CL:0002032!2.87e-13!32;CL:0000037!2.87e-13!32;CL:0000566!2.87e-13!32;CL:0000837!2.87e-13!32;CL:0002320!1.43e-08!46;CL:0000134!1.43e-08!46;CL:0000034!1.90e-08!97;CL:0000049!4.25e-08!19;CL:0002031!1.61e-07!25;CL:0000219!2.56e-07!54;CL:0000838!4.61e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,9.91e-15,19;CL:0000988,4.88e-13,32;CL:0002032,4.88e-13,32;CL:0000037,4.88e-13,32;CL:0000837,4.88e-13,32;CL:0000034,4.85e-10,97;CL:0002320,1.25e-08,46;CL:0000134,1.25e-08,46;CL:0000219,3.92e-07,54;CL:0000763,5.94e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.10e-15,3;DOID:4045,7.10e-15,3;DOID:0050686,8.99e-13,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.43e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.25e-08,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.985521055061667,0.936258105287974,0,0,0.342401459862411,0,0,0.202475267389826,0,0.946386496074713,1.09691546884591,2.54633791078818,0,0.397163804803541,1.04479915655574,0.319984845586813,0,0,0,0,0,0,0,1.90509202037889,0,0,0,0,0.204169356262369,5.02237956884289,1.5626706890476,3.66466620781659,2.94115744015507,1.36609096991689,4.85510353031154,0,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0,0,0,3.18786951509699,0,0.336093799142464,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,4.43315960671905,8.39863823390771,2.54140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,0.702213187313235,2.31613116403244,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0.102904612379284,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,0,0,0.136694227721025,0,4.07948231985253,6.15786390224095,3.73139929271944,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.0897138566094757,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr11:6447278..6447298,+ | |||
}} |
Revision as of 20:21, 12 September 2013
Short description: | p@chr11:6447278..6447298, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:6447278..6447298, + |
Coexpression cluster: | MCL_coexpression_mm9:384 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 9.91e-15 | 19 |
hematopoietic cell | 4.88e-13 | 32 |
hematopoietic oligopotent progenitor cell | 4.88e-13 | 32 |
hematopoietic stem cell | 4.88e-13 | 32 |
hematopoietic multipotent progenitor cell | 4.88e-13 | 32 |
stem cell | 4.85e-10 | 97 |
connective tissue cell | 1.25e-08 | 46 |
mesenchymal cell | 1.25e-08 | 46 |
motile cell | 3.92e-07 | 54 |
myeloid cell | 5.94e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.25e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.10e-15 | 3 |
muscle cancer | 7.10e-15 | 3 |
organ system cancer | 8.99e-13 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.