FFCP PHASE1:Mm9::chr11:67373333..67373336,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:67373333..67373336,+|id=chr11:67373333..67373336,+|ontology_enrichment_celltype=CL:0000049!8.28e-14!19;CL:0000557!1.10e-10!7;CL:0000763!4.19e-08!16;CL:0000988!2.01e-07!32;CL:0002032!2.01e-07!32;CL:0000037!2.01e-07!32;CL:0000566!2.01e-07!32;CL:0000837!2.01e-07!32|ontology_enrichment_celltype_v019_2=CL:0000557,5.85e-22,7;CL:0000049,5.13e-20,19;CL:0002476,7.06e-13,2;CL:0000988,1.32e-11,32;CL:0002032,1.32e-11,32;CL:0000037,1.32e-11,32;CL:0000837,1.32e-11,32;CL:0000763,1.29e-09,16;CL:0002320,7.72e-08,46;CL:0000134,7.72e-08,46;CL:0000355,4.29e-07,9;CL:0000723,4.33e-07,91;CL:0000048,4.33e-07,91;CL:0002194,6.92e-07,4;CL:0000766,6.92e-07,4;CL:0000234,6.92e-07,4;CL:0000576,6.92e-07,4;CL:0000235,6.92e-07,4;CL:0000864,6.92e-07,4;CL:0002009,6.92e-07,4;CL:0000040,6.92e-07,4;CL:0000559,6.92e-07,4|ontology_enrichment_disease=DOID:0060100!3.15e-10!3;DOID:4045!3.15e-10!3|ontology_enrichment_disease_v019_2=DOID:0060100,3.45e-20,3;DOID:4045,3.45e-20,3;DOID:0050686,2.15e-10,6|ontology_enrichment_uberon=UBERON:0002204!4.28e-09!32;UBERON:0000014!1.66e-08!5;UBERON:0001003!1.66e-08!5;UBERON:0002097!1.66e-08!5;UBERON:0002199!1.66e-08!5;UBERON:0007029!1.66e-08!5;UBERON:0007376!1.66e-08!5;UBERON:0002416!1.66e-08!5;UBERON:0007383!1.66e-08!5;UBERON:0002371!4.19e-08!16|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.32e-12,32;UBERON:0002371,1.29e-09,16;UBERON:0002384,7.72e-08,46;UBERON:0001134,4.29e-07,9;UBERON:0002036,4.29e-07,9;UBERON:0002385,4.29e-07,9;UBERON:0000486,4.29e-07,9;UBERON:0007503,4.29e-07,9;UBERON:0001015,4.29e-07,9;UBERON:0002329,4.29e-07,9;UBERON:0003082,4.29e-07,9;UBERON:0003059,4.29e-07,9;UBERON:0007282,4.29e-07,9;UBERON:0004290,4.29e-07,9;UBERON:0009618,4.29e-07,9;UBERON:0001474,5.67e-07,22;UBERON:0004765,5.67e-07,22;UBERON:0001434,5.67e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.9713406745312,27.346737058333,16.2292360631877,344.703651986174,54.6436387966757,13.1087795318411,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75112597628417,11.9980546198682,8.13249453267614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.61734640922383,0,14.7464769335779,16.7276139624565,4.54661599032948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0,0.169978429993855,0.559805809294632,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr11:67373333..67373336,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:67373333..67373336,+ | |||
|id=chr11:67373333..67373336,+ | |||
|ontology_enrichment_celltype=CL:0000049!8.28e-14!19;CL:0000557!1.10e-10!7;CL:0000763!4.19e-08!16;CL:0000988!2.01e-07!32;CL:0002032!2.01e-07!32;CL:0000037!2.01e-07!32;CL:0000566!2.01e-07!32;CL:0000837!2.01e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,5.85e-22,7;CL:0000049,5.13e-20,19;CL:0002476,7.06e-13,2;CL:0000988,1.32e-11,32;CL:0002032,1.32e-11,32;CL:0000037,1.32e-11,32;CL:0000837,1.32e-11,32;CL:0000763,1.29e-09,16;CL:0002320,7.72e-08,46;CL:0000134,7.72e-08,46;CL:0000355,4.29e-07,9;CL:0000723,4.33e-07,91;CL:0000048,4.33e-07,91;CL:0002194,6.92e-07,4;CL:0000766,6.92e-07,4;CL:0000234,6.92e-07,4;CL:0000576,6.92e-07,4;CL:0000235,6.92e-07,4;CL:0000864,6.92e-07,4;CL:0002009,6.92e-07,4;CL:0000040,6.92e-07,4;CL:0000559,6.92e-07,4 | |||
|ontology_enrichment_disease=DOID:0060100!3.15e-10!3;DOID:4045!3.15e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.45e-20,3;DOID:4045,3.45e-20,3;DOID:0050686,2.15e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!4.28e-09!32;UBERON:0000014!1.66e-08!5;UBERON:0001003!1.66e-08!5;UBERON:0002097!1.66e-08!5;UBERON:0002199!1.66e-08!5;UBERON:0007029!1.66e-08!5;UBERON:0007376!1.66e-08!5;UBERON:0002416!1.66e-08!5;UBERON:0007383!1.66e-08!5;UBERON:0002371!4.19e-08!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.32e-12,32;UBERON:0002371,1.29e-09,16;UBERON:0002384,7.72e-08,46;UBERON:0001134,4.29e-07,9;UBERON:0002036,4.29e-07,9;UBERON:0002385,4.29e-07,9;UBERON:0000486,4.29e-07,9;UBERON:0007503,4.29e-07,9;UBERON:0001015,4.29e-07,9;UBERON:0002329,4.29e-07,9;UBERON:0003082,4.29e-07,9;UBERON:0003059,4.29e-07,9;UBERON:0007282,4.29e-07,9;UBERON:0004290,4.29e-07,9;UBERON:0009618,4.29e-07,9;UBERON:0001474,5.67e-07,22;UBERON:0004765,5.67e-07,22;UBERON:0001434,5.67e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.9713406745312,27.346737058333,16.2292360631877,344.703651986174,54.6436387966757,13.1087795318411,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.75112597628417,11.9980546198682,8.13249453267614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.61734640922383,0,14.7464769335779,16.7276139624565,4.54661599032948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01582567878545,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0,0,0.169978429993855,0.559805809294632,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr11:67373333..67373336,+ | |||
}} |
Revision as of 20:29, 12 September 2013
Short description: | p@chr11:67373333..67373336, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:67373333..67373336, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 5.85e-22 | 7 |
common myeloid progenitor | 5.13e-20 | 19 |
bone marrow macrophage | 7.06e-13 | 2 |
hematopoietic cell | 1.32e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.32e-11 | 32 |
hematopoietic stem cell | 1.32e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.32e-11 | 32 |
myeloid cell | 1.29e-09 | 16 |
connective tissue cell | 7.72e-08 | 46 |
mesenchymal cell | 7.72e-08 | 46 |
multi-potent skeletal muscle stem cell | 4.29e-07 | 9 |
somatic stem cell | 4.33e-07 | 91 |
multi fate stem cell | 4.33e-07 | 91 |
monopoietic cell | 6.92e-07 | 4 |
myeloid leukocyte | 6.92e-07 | 4 |
phagocyte | 6.92e-07 | 4 |
monocyte | 6.92e-07 | 4 |
macrophage | 6.92e-07 | 4 |
tissue-resident macrophage | 6.92e-07 | 4 |
macrophage dendritic cell progenitor | 6.92e-07 | 4 |
monoblast | 6.92e-07 | 4 |
promonocyte | 6.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 7.32e-12 | 32 |
bone marrow | 1.29e-09 | 16 |
connective tissue | 7.72e-08 | 46 |
skeletal muscle tissue | 4.29e-07 | 9 |
striated muscle tissue | 4.29e-07 | 9 |
muscle tissue | 4.29e-07 | 9 |
multilaminar epithelium | 4.29e-07 | 9 |
epithelial vesicle | 4.29e-07 | 9 |
musculature | 4.29e-07 | 9 |
somite | 4.29e-07 | 9 |
myotome | 4.29e-07 | 9 |
presomitic mesoderm | 4.29e-07 | 9 |
presumptive segmental plate | 4.29e-07 | 9 |
dermomyotome | 4.29e-07 | 9 |
trunk paraxial mesoderm | 4.29e-07 | 9 |
bone element | 5.67e-07 | 22 |
skeletal element | 5.67e-07 | 22 |
skeletal system | 5.67e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.45e-20 | 3 |
muscle cancer | 3.45e-20 | 3 |
organ system cancer | 2.15e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.